RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 PRRT2Q7Z6L0 340 aaPredicted RBP7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 WDR49Q8IV35 697 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 KATNAL2Q8IYT4 538 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 OR8H2Q8N162 312 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 NAT8LQ8N9F0 302 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 TEX19Q8NA77 164 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 SPATA18Q8TC71 538 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 NRG4Q8WWG1 115 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 ZNF606Q8WXB4 792 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 GPR20Q99678 358 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 ACO2Q99798 780 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 GAL3ST1Q99999 423 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 PSD2Q9BQI7 771 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 ZSCAN5AQ9BUG6 496 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 CDC42EP4Q9H3Q1 356 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 ZC4H2Q9NQZ6 224 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 THEGQ9P2T0 379 aa7.61□□□□□ -1.19
PDLIM5-219ENST00000514743 ADM5C9JUS6 153 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 CAPN9O14815 690 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 RGS13O14921 159 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 PEX1O43933 1283 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 ATP5HO75947 161 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 CYP17A1P05093 508 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 HOXC6P09630 235 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 CHN1P15882 459 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 MMP8P22894 467 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 RFC1P35251 1148 aaPredicted RBP7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 OGDHQ02218 1023 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 SCRN3Q0VDG4 424 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 CDC16Q13042 620 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 ERMARDQ5T6L9 678 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 EEPD1Q7L9B9 569 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 ZER1Q7Z7L7 766 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 LINC00518Q8N0U6 118 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 WDTC1Q8N5D0 677 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 TNIP3Q96KP6 325 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 MNTQ99583 582 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 LBHD1Q9BQE6 289 aaPredicted RBP7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 OSBPL6Q9BZF3 934 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 KCNN2Q9H2S1 579 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 TP63Q9H3D4 680 aaPredicted RBP7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 TXNRD2Q9NNW7 524 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 ASNSD1Q9NWL6 643 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 PPP1R14DQ9NXH3 145 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 TAS2R7Q9NYW3 318 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 CITO14578 2027 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 PDCD11Q14690 1871 aaKnown RBP7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 THAP12O43422 761 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 TOM1L1O75674 476 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 SUN1O94901 812 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 PRKAR2AP13861 404 aaKnown RBP7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 VCLP18206 1134 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 ATP6V1E1P36543 226 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 ST13P50502 369 aaKnown RBP7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 RAC1P63000 192 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 SLC34A1Q06495 639 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 VAC14Q08AM6 782 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 LAMTOR4Q0VGL1 99 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 AUHQ13825 339 aaKnown RBP7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 LEXMQ3ZCV2 418 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 ZBTB33Q86T24 672 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 STX12Q86Y82 276 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 TMEM130Q8N3G9 435 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 CPA6Q8N4T0 437 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 OR8K3Q8NH51 312 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 TEX47Q8TBZ9 253 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 PPP1R36Q96LQ0 422 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 PWWP2AQ96N64 755 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 C19orf43Q9BQ61 176 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 VRTNQ9H8Y1 702 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 CNOT10Q9H9A5 744 aaKnown RBP7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 NRBP2Q9NSY0 501 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 DDX43Q9NXZ2 648 aaKnown RBP7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 SLC7A8Q9UHI5 535 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 CACNG2Q9Y698 323 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 SOBPA7XYQ1 873 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 RNASEH1O60930 286 aaKnown RBP7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 ESRRBO95718 433 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 PGK2P07205 417 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 KLRC2P26717 231 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 ASPAP45381 313 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 PHKA2P46019 1235 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 RAP1GDS1P52306 607 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 LAMC2Q13753 1193 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 ATP13A4Q4VNC1 1196 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 C9orf131Q5VYM1 1079 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 FAM160B1Q5W0V3 765 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 MFSD5Q6N075 450 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 IZUMO2Q6UXV1 221 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 RHOT1Q8IXI2 618 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 PCYOX1LQ8NBM8 494 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 KCT2Q8NC54 265 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 ZNF317Q96PQ6 595 aaPredicted RBP7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 SERINC2Q96SA4 455 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 C9orf16Q9BUW7 83 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 NUSAP1Q9BXS6 441 aaKnown RBP7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 XYLT2Q9H1B5 865 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 SMYD3Q9H7B4 428 aa7.6□□□□□ -1.19
PDLIM5-219ENST00000514743 RRN3Q9NYV6 651 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms