RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 TM4SF1P30408 202 aa7.87□□□□□ -1.15
CLCN3-209ENST00000513761 SQLEQ14534 574 aa7.87□□□□□ -1.15
CLCN3-209ENST00000513761 RSBN1Q5VWQ0 802 aaPredicted RBP7.87□□□□□ -1.15
CLCN3-209ENST00000513761 TATDN1Q6P1N9 297 aa7.87□□□□□ -1.15
CLCN3-209ENST00000513761 TRIM74Q86UV6 250 aa7.87□□□□□ -1.15
CLCN3-209ENST00000513761 TRIM73Q86UV7 250 aa7.87□□□□□ -1.15
CLCN3-209ENST00000513761 ITFG1Q8TB96 612 aa7.87□□□□□ -1.15
CLCN3-209ENST00000513761 P2RY11Q96G91 374 aa7.87□□□□□ -1.15
CLCN3-209ENST00000513761 TCF12Q99081 682 aa7.87□□□□□ -1.15
CLCN3-209ENST00000513761 PREBQ9HCU5 417 aa7.87□□□□□ -1.15
CLCN3-209ENST00000513761 HMG20AQ9NP66 347 aa7.87□□□□□ -1.15
CLCN3-209ENST00000513761 SEMA4BQ9NPR2 832 aaPredicted RBP7.87□□□□□ -1.15
CLCN3-209ENST00000513761 COL20A1Q9P218 1284 aa7.87□□□□□ -1.15
CLCN3-209ENST00000513761 ADAM28Q9UKQ2 775 aa7.87□□□□□ -1.15
CLCN3-209ENST00000513761 RAB26Q9ULW5 256 aa7.87□□□□□ -1.15
CLCN3-209ENST00000513761 EFR3BQ9Y2G0 817 aa7.87□□□□□ -1.15
CLCN3-209ENST00000513761 MYH15Q9Y2K3 1946 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 IGKV6D-41A0A0C4DH26 115 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 TMEM247A6NEH6 219 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 SYNCRIPO60506 623 aaKnown RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 PLA2G6O60733 806 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 CCT8P50990 548 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 GRIK3Q13003 919 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 PFKFB4Q16877 469 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 SCARA3Q6AZY7 606 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 NEPROQ6NW34 567 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 EGFL6Q8IUX8 553 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 NAT8LQ8N9F0 302 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 BPIFB6Q8NFQ5 453 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 C7orf43Q8WVR3 580 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 AZIN2Q96A70 460 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 MAGED4Q96JG8 741 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 RPRD1AQ96P16 312 aaPredicted RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 TRHDEQ9UKU6 1024 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 BUD23O43709 281 aaKnown RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 CDH3P22223 829 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 UBA1P22314 1058 aaKnown RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 ATP6V1E1P36543 226 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 LDLRAP1Q5SW96 308 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 SH3PXD2AQ5TCZ1 1133 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 DRICH1Q6PGQ1 229 aaPredicted RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 SCIMPQ6UWF3 145 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 ILDR2Q71H61 639 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 FBXO39Q8N4B4 442 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 ENDOVQ8N8Q3 282 aaKnown RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 PLEKHO2Q8TD55 490 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 HASPINQ8TF76 798 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 LRTOMTQ8WZ04 291 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 BTBD9Q96Q07 612 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 ACOX2Q99424 681 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 REXO4Q9GZR2 422 aaKnown RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 CDT1Q9H211 546 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 RIBC2Q9H4K1 309 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 ABI2Q9NYB9 513 aaPredicted RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 BTRCQ9Y297 605 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 TMA7Q9Y2S6 64 aaKnown RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 YDJCA8MPS7 323 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 LYPLA2O95372 231 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 F7P08709 466 aaPredicted RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 SLC2A4P14672 509 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 ALOX12P18054 663 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 CCNA2P20248 432 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 ATP5F1P24539 256 aaPredicted RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 MTTPP55157 894 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 CDH13P55290 713 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 MRPL28Q13084 256 aaKnown RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 NADK2Q4G0N4 442 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 ARL13AQ5H913 290 aaPredicted RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 ZC3H12BQ5HYM0 836 aaKnown RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 PPP1R26Q5T8A7 1209 aaPredicted RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 CD101Q93033 1021 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 ZNF358Q9NW07 568 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 DNAJC28Q9NX36 388 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 ZNF180Q9UJW8 692 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 SH3GLB1Q9Y371 365 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 MTF2Q9Y483 593 aaPredicted RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 STX7O15400 261 aaKnown RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 ASNA1O43681 348 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 FAM20BO75063 409 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 B3GAT3O94766 335 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 ZBTB7AO95365 584 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 TOP3BO95985 862 aaKnown RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 HIST1H2AGP0C0S8 130 aaPredicted RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 HIST1H2ADP20671 130 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 DDX39BQ13838 428 aaKnown RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 PGS1Q32NB8 556 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 TMEM63BQ5T3F8 832 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 CACHD1Q5VU97 1274 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 CHADLQ6NUI6 762 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 SYTL1Q8IYJ3 562 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 LPGAT1Q92604 370 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 HIST1H2AHQ96KK5 128 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 HIST1H2AJQ99878 128 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 H2AFJQ9BTM1 129 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 GPR63Q9BZJ6 419 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 TKTL2Q9H0I9 626 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 TRNAU1APQ9NX07 287 aaKnown RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 RBMX2Q9Y388 322 aaKnown RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 CBFA2T3O75081 653 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 CRTAMO95727 393 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms