RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 TLR6Q9Y2C9 796 aa10.78□□□□□ -0.68
CLDND1-227ENST00000513452 CSNK1G3Q9Y6M4 447 aa10.78□□□□□ -0.68
CLDND1-227ENST00000513452 RELNP78509 3460 aa10.78□□□□□ -0.68
CLDND1-227ENST00000513452 TEP1Q99973 2627 aaKnown RBP10.78□□□□□ -0.68
CLDND1-227ENST00000513452 SPTY2D1-AS1A0A0U1RR47 76 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 CLEC18AA5D8T8 446 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 POM121BA6NF01 834 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 O00370 1275 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 RIOK3O14730 519 aaKnown RBP10.77□□□□□ -0.69
CLDND1-227ENST00000513452 MCF2LO15068 1137 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 MAPK13O15264 365 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 ATP9BO43861 1147 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 GABBR2O75899 941 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 APOEP02649 317 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 CTSLP07711 333 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 PDIA4P13667 645 aaKnown RBP10.77□□□□□ -0.69
CLDND1-227ENST00000513452 JUNDP17535 347 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 WT1P19544 449 aaPredicted RBP10.77□□□□□ -0.69
CLDND1-227ENST00000513452 RPIAP49247 311 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 FOXK1P85037 733 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 SLC12A1Q13621 1099 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 DLG2Q15700 870 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 CLEC18BQ6UXF7 455 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 RAB11FIP2Q7L804 512 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 TAC4Q86UU9 113 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 DCP2Q8IU60 420 aaKnown RBP10.77□□□□□ -0.69
CLDND1-227ENST00000513452 SLC35F3Q8IY50 421 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 FAM186BQ8IYM0 893 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 CCAR2Q8N163 923 aaKnown RBP10.77□□□□□ -0.69
CLDND1-227ENST00000513452 ZSCAN1Q8NBB4 408 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 CLEC18CQ8NCF0 446 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 LINC00301Q8NCQ3 95 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 ZNF564Q8TBZ8 553 aaPredicted RBP10.77□□□□□ -0.69
CLDND1-227ENST00000513452 HTR3CQ8WXA8 447 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 IRGQQ8WZA9 623 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 EEF2KMTQ96G04 330 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 SLC39A13Q96H72 371 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 PPP1R13BQ96KQ4 1090 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 BMFQ96LC9 184 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 FOXP3Q9BZS1 431 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 DYRK4Q9NR20 520 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 GPR27Q9NS67 375 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 SEPT10Q9P0V9 454 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 PISDQ9UG56 409 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 IPO11Q9UI26 975 aaKnown RBP10.77□□□□□ -0.69
CLDND1-227ENST00000513452 ACSL6Q9UKU0 697 aa10.77□□□□□ -0.69
CLDND1-227ENST00000513452 BLACEA4D250 179 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 D6RAR5 112 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 F5H5T6 163 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 AGRPO00253 132 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 RAD51BO15315 384 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 CALUO43852 315 aaPredicted RBP10.76□□□□□ -0.69
CLDND1-227ENST00000513452 KLRC4O43908 158 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 JMJD7P0C870 316 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 NR2F2P24468 414 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 EIF3IQ13347 325 aaKnown RBP10.76□□□□□ -0.69
CLDND1-227ENST00000513452 NNTQ13423 1086 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 PDE1CQ14123 709 aaPredicted RBP10.76□□□□□ -0.69
CLDND1-227ENST00000513452 TMEM259Q4ZIN3 620 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 TPRG1LQ5T0D9 272 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 KRT39Q6A163 491 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 HIST2H2BCQ6DN03 193 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 CXorf57Q6NSI4 855 aaKnown RBP10.76□□□□□ -0.69
CLDND1-227ENST00000513452 RBFAQ8N0V3 343 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 FBXL13Q8NEE6 735 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 FAM174AQ8TBP5 190 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 GLMNQ92990 594 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 RNF34Q969K3 372 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 FAXDC2Q96IV6 333 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 PSMG3-AS1Q96PY0 264 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 BOCQ9BWV1 1114 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 STRADBQ9C0K7 418 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 MIS12Q9H081 205 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 RAB20Q9NX57 234 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 KCNK4Q9NYG8 393 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 NAALADL1Q9UQQ1 740 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 NBASA2RRP1 2371 aa10.76□□□□□ -0.69
CLDND1-227ENST00000513452 UTP20O75691 2785 aaKnown RBP10.75□□□□□ -0.69
CLDND1-227ENST00000513452 RP1P56715 2156 aa10.75□□□□□ -0.69
CLDND1-227ENST00000513452 PRAMEF33A0A0G2JMD5 474 aa10.75□□□□□ -0.69
CLDND1-227ENST00000513452 TCAF2A6NFQ2 919 aa10.75□□□□□ -0.69
CLDND1-227ENST00000513452 NTN3O00634 580 aaPredicted RBP10.75□□□□□ -0.69
CLDND1-227ENST00000513452 TPP1O14773 563 aa10.75□□□□□ -0.69
CLDND1-227ENST00000513452 PRAMEF10O60809 474 aa10.75□□□□□ -0.69
CLDND1-227ENST00000513452 CUTAO60888 179 aa10.75□□□□□ -0.69
CLDND1-227ENST00000513452 PPP6R2O75170 966 aa10.75□□□□□ -0.69
CLDND1-227ENST00000513452 GCATO75600 419 aa10.75□□□□□ -0.69
CLDND1-227ENST00000513452 FYNP06241 537 aa10.75□□□□□ -0.69
CLDND1-227ENST00000513452 VDRP11473 427 aa10.75□□□□□ -0.69
CLDND1-227ENST00000513452 SYT1P21579 422 aa10.75□□□□□ -0.69
CLDND1-227ENST00000513452 RABIFP47224 123 aa10.75□□□□□ -0.69
CLDND1-227ENST00000513452 MXI1P50539 228 aa10.75□□□□□ -0.69
CLDND1-227ENST00000513452 PLK1P53350 603 aa10.75□□□□□ -0.69
CLDND1-227ENST00000513452 CENPCQ03188 943 aa10.75□□□□□ -0.69
CLDND1-227ENST00000513452 CCDC15Q0P6D6 951 aa10.75□□□□□ -0.69
CLDND1-227ENST00000513452 C1orf61Q13536 156 aa10.75□□□□□ -0.69
CLDND1-227ENST00000513452 FGL2Q14314 439 aa10.75□□□□□ -0.69
CLDND1-227ENST00000513452 ZC3H12AQ5D1E8 599 aaKnown RBP10.75□□□□□ -0.69
CLDND1-227ENST00000513452 PRRT3Q5FWE3 981 aa10.75□□□□□ -0.69
CLDND1-227ENST00000513452 PMF1Q6P1K2 205 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms