RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 CHCHD4Q8N4Q1 142 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 RDM1Q8NG50 284 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 CRYGNQ8WXF5 182 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 TCEAL3Q969E4 200 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 LRIG1Q96JA1 1093 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 CLUHP3Q96NS8 147 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 GAD1Q99259 594 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 RIT2Q99578 217 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 ZNF577Q9BSK1 485 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 PI4K2AQ9BTU6 479 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 NUSAP1Q9BXS6 441 aaKnown RBP4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 ANO3Q9BYT9 981 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 HCFC1R1Q9NWW0 138 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 OBP2AQ9NY56 170 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 MTRRQ9UBK8 725 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 IPPQ9Y573 584 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 LAMA1P25391 3075 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 ZNF462Q96JM2 2506 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 PIEZO2Q9H5I5 2752 aa4.01□□□□□ -1.77
PDLIM5-218ENST00000513341 THADAQ6YHU6 1953 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 HECTD1Q9ULT8 2610 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 PI4KAP42356 2102 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 PLXNB3Q9ULL4 1909 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 UBA6A0AVT1 1052 aaPredicted RBP4□□□□□ -1.77
PDLIM5-218ENST00000513341 HEPACAM2A8MVW5 462 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 TMEM189-UBE2V1I3L0A0 370 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 CCER2I3L3R5 266 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 DDX39AO00148 427 aaKnown RBP4□□□□□ -1.77
PDLIM5-218ENST00000513341 LEFTY2O00292 366 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 TRDMT1O14717 391 aaKnown RBP4□□□□□ -1.77
PDLIM5-218ENST00000513341 EXTL3O43909 919 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 DKC1O60832 514 aaKnown RBP eCLIP4□□□□□ -1.77
PDLIM5-218ENST00000513341 POU3F2P20265 443 aaPredicted RBP4□□□□□ -1.77
PDLIM5-218ENST00000513341 DRD1P21728 446 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 CIITAP33076 1130 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 JAK3P52333 1124 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 GRSF1Q12849 480 aaKnown RBP eCLIP4□□□□□ -1.77
PDLIM5-218ENST00000513341 DRP2Q13474 957 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 UBE2SQ16763 222 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 ARHGAP44Q17R89 818 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 SLC5A9Q2M3M2 681 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 UAP1L1Q3KQV9 507 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 TMEM196Q5HYL7 178 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 TPGS2Q68CL5 300 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 PMS2CLQ68D20 193 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 SLC8B1Q6J4K2 584 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 ZCCHC8Q6NZY4 707 aaKnown RBP4□□□□□ -1.77
PDLIM5-218ENST00000513341 PRSS55Q6UWB4 352 aaPredicted RBP4□□□□□ -1.77
PDLIM5-218ENST00000513341 Q6ZS52 159 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 PDZD4Q76G19 769 aaPredicted RBP4□□□□□ -1.77
PDLIM5-218ENST00000513341 TRMT1LQ7Z2T5 733 aaKnown RBP4□□□□□ -1.77
PDLIM5-218ENST00000513341 RABEPKQ7Z6M1 372 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 KIF18BQ86Y91 864 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 UNC5BQ8IZJ1 945 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 ELMOD1Q8N336 334 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 HDDC3Q8N4P3 179 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 SRBD1Q8N5C6 995 aaKnown RBP4□□□□□ -1.77
PDLIM5-218ENST00000513341 NCOA7Q8NI08 942 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 CEP76Q8TAP6 659 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 OTUD7AQ8TE49 926 aaPredicted RBP4□□□□□ -1.77
PDLIM5-218ENST00000513341 ASB10Q8WXI3 467 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 PIBF1Q8WXW3 757 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 ING5Q8WYH8 240 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 FUBP1Q96AE4 644 aaKnown RBP4□□□□□ -1.77
PDLIM5-218ENST00000513341 WBP1Q96G27 269 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 ZNF668Q96K58 619 aaPredicted RBP4□□□□□ -1.77
PDLIM5-218ENST00000513341 B3GALT6Q96L58 329 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 ORAI3Q9BRQ5 295 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 ADGRE3Q9BY15 652 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 RBM12Q9NTZ6 932 aaKnown RBP4□□□□□ -1.77
PDLIM5-218ENST00000513341 C2orf42Q9NWW7 574 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 THG1LQ9NWX6 298 aaKnown RBP4□□□□□ -1.77
PDLIM5-218ENST00000513341 COL4A3BPQ9Y5P4 624 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 ABCA7Q8IZY2 2146 aa4□□□□□ -1.77
PDLIM5-218ENST00000513341 VWA8A3KMH1 1905 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 LOC400499M0QZD8 3231 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 APC2O95996 2303 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 A0A1B0GUA9 196 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 SPAARA0A1B0GVQ0 90 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 SMCO2A6NFE2 343 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 SLC38A8A6NNN8 435 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 OPHN1O60890 802 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 DNAJC8O75937 253 aaPredicted RBP3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 ERLIN2O94905 339 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 STBD1O95210 358 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 SPDEFO95238 335 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 APBB3O95704 486 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 FGF19O95750 216 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 THP07101 528 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 CEBPBP17676 345 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 MLH1P40692 756 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 VIPR2P41587 438 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 LIFRP42702 1097 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 PXNP49023 591 aaPredicted RBP3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 ATXN3P54252 364 aaPredicted RBP3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 PRKCEQ02156 737 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 OCA2Q04671 838 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 TP53BP2Q13625 1128 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 BYSLQ13895 437 aaKnown RBP3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 MXD4Q14582 209 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms