RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 STAT6P42226 847 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 RPS6KA3P51812 740 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 SLC12A2P55011 1212 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 SLC37A1P57057 533 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 TLE2Q04725 743 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 CDK18Q07002 472 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 TBX2Q13207 712 aaPredicted RBP4.61□□□□□ -1.67
HTT-210ENST00000512909 SLC14A1Q13336 389 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 C10orf76Q5T2E6 689 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 ATG16L1Q676U5 607 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 FBXO42Q6P3S6 717 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 SMIM5Q71RC9 77 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 RASGRP2Q7LDG7 609 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 CNGA4Q8IV77 575 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 LAS2Q8IYD9 372 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 NAXEQ8NCW5 288 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 PIGBQ92521 554 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 SH3KBP1Q96B97 665 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 HVCN1Q96D96 273 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 KTI12Q96EK9 354 aaPredicted RBP4.61□□□□□ -1.67
HTT-210ENST00000512909 ZNF845Q96IR2 970 aaPredicted RBP4.61□□□□□ -1.67
HTT-210ENST00000512909 CD180Q99467 661 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 FAM118BQ9BPY3 351 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 EIF2AK1Q9BQI3 630 aaKnown RBP4.61□□□□□ -1.67
HTT-210ENST00000512909 SCAND2PQ9GZW5 306 aaPredicted RBP4.61□□□□□ -1.67
HTT-210ENST00000512909 OSBPL5Q9H0X9 879 aaPredicted RBP4.61□□□□□ -1.67
HTT-210ENST00000512909 TMPRSS5Q9H3S3 457 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 RMI1Q9H9A7 625 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 PLEKHA2Q9HB19 425 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 ERVK-5Q9HDB9 667 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 ARPP21Q9UBL0 812 aaPredicted RBP4.61□□□□□ -1.67
HTT-210ENST00000512909 ARHGAP26Q9UNA1 814 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 DHDHQ9UQ10 334 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 LZTS1Q9Y250 596 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 B3GNT3Q9Y2A9 372 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 GDAQ9Y2T3 454 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 PIK3C2AO00443 1686 aa4.61□□□□□ -1.67
HTT-210ENST00000512909 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.6□□□□□ -1.67
HTT-210ENST00000512909 BRWD3Q6RI45 1802 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 CYP3A7-CYP3A51PA0A087WV96 503 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 TSPAN4O14817 238 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 EPB41L2O43491 1005 aaKnown RBP4.6□□□□□ -1.67
HTT-210ENST00000512909 HBP1O60381 514 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 CNTN5O94779 1100 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 HEXIM1O94992 359 aaKnown RBP4.6□□□□□ -1.67
HTT-210ENST00000512909 CYP2D6P10635 497 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 CYP4B1P13584 511 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 CYP3A7P24462 503 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 HMGB2P26583 209 aaKnown RBP4.6□□□□□ -1.67
HTT-210ENST00000512909 CIITAP33076 1130 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 PAFAH1B1P43034 410 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 VAMP2P63027 116 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 GHRHRQ02643 423 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 GALNT3Q14435 633 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 LRRC24Q50LG9 513 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 ZNF484Q5JVG2 852 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 LIPMQ5VYY2 423 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 CYB5R4Q7L1T6 521 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 CHSY1Q86X52 802 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 VPS52Q8N1B4 723 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 LINC01465Q8N7H1 131 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 LINS1Q8NG48 757 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 SLC2A12Q8TD20 617 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 HASPINQ8TF76 798 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 CLEC4CQ8WTT0 213 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 NCSTNQ92542 709 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 TRMT61AQ96FX7 289 aaKnown RBP4.6□□□□□ -1.67
HTT-210ENST00000512909 ADAD1Q96M93 576 aaKnown RBP4.6□□□□□ -1.67
HTT-210ENST00000512909 EFHD1Q9BUP0 239 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 IFT27Q9BW83 186 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 SLC26A6Q9BXS9 759 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 TWSG1Q9GZX9 223 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 PDCL3Q9H2J4 239 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 IKZF4Q9H2S9 585 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.6□□□□□ -1.67
HTT-210ENST00000512909 THAP1Q9NVV9 213 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 GAR1Q9NY12 217 aaKnown RBP4.6□□□□□ -1.67
HTT-210ENST00000512909 ASIC5Q9NY37 505 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 IFT80Q9P2H3 777 aaPredicted RBP4.6□□□□□ -1.67
HTT-210ENST00000512909 CNOT7Q9UIV1 285 aaKnown RBP4.6□□□□□ -1.67
HTT-210ENST00000512909 CRYL1Q9Y2S2 319 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 PARD3Q8TEW0 1356 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 ABCA3Q99758 1704 aa4.6□□□□□ -1.67
HTT-210ENST00000512909 TMEM247A6NEH6 219 aa4.59□□□□□ -1.67
HTT-210ENST00000512909 RTL1A6NKG5 1358 aa4.59□□□□□ -1.67
HTT-210ENST00000512909 PRRT4C9JH25 899 aa4.59□□□□□ -1.67
HTT-210ENST00000512909 NFAT5O94916 1531 aa4.59□□□□□ -1.67
HTT-210ENST00000512909 HLA-DQA2P01906 255 aa4.59□□□□□ -1.67
HTT-210ENST00000512909 CHN1P15882 459 aa4.59□□□□□ -1.67
HTT-210ENST00000512909 HOXB9P17482 250 aaPredicted RBP4.59□□□□□ -1.67
HTT-210ENST00000512909 CD53P19397 219 aa4.59□□□□□ -1.67
HTT-210ENST00000512909 TFEBP19484 476 aa4.59□□□□□ -1.67
HTT-210ENST00000512909 PROZP22891 400 aa4.59□□□□□ -1.67
HTT-210ENST00000512909 CERS1P27544 350 aa4.59□□□□□ -1.67
HTT-210ENST00000512909 ITPKBP27987 946 aa4.59□□□□□ -1.67
HTT-210ENST00000512909 DDIT3P35638 169 aa4.59□□□□□ -1.67
HTT-210ENST00000512909 SKIV2L2P42285 1042 aaKnown RBP4.59□□□□□ -1.67
HTT-210ENST00000512909 FAM3BP58499 235 aaPredicted RBP4.59□□□□□ -1.67
HTT-210ENST00000512909 SHC2P98077 582 aa4.59□□□□□ -1.67
HTT-210ENST00000512909 TEFQ10587 303 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms