RNA–Protein interactions for RNA: ENST00000512466.1

PDCD6-209, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,763 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-209ENST00000512466 DSEQ9UL01 958 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 RPL26L1Q9UNX3 145 aaKnown RBP10.84□□□□□ -0.67
PDCD6-209ENST00000512466 LSM1O15116 133 aaKnown RBP10.84□□□□□ -0.67
PDCD6-209ENST00000512466 USP17L7P0C7H9 530 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 CKMT2P17540 419 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 ERCC2P18074 760 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 YWHAHQ04917 246 aaPredicted RBP10.84□□□□□ -0.67
PDCD6-209ENST00000512466 GSTA3Q16772 222 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 ARL13BQ3SXY8 428 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 TRNP1Q6NT89 227 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 DENND6AQ8IWF6 608 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 PDCD6IPQ8WUM4 868 aaKnown RBP10.84□□□□□ -0.67
PDCD6-209ENST00000512466 ZMAT2Q96NC0 199 aaKnown RBP10.84□□□□□ -0.67
PDCD6-209ENST00000512466 TRIM8Q9BZR9 551 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 SSU72Q9NP77 194 aaKnown RBP10.84□□□□□ -0.67
PDCD6-209ENST00000512466 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.84□□□□□ -0.67
PDCD6-209ENST00000512466 ACOT9Q9Y305 439 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 ADGRA2Q96PE1 1338 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 NR5A2O00482 541 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 XPOTO43592 962 aaKnown RBP10.84□□□□□ -0.67
PDCD6-209ENST00000512466 TIPRLO75663 272 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 PARNO95453 639 aaKnown RBP10.84□□□□□ -0.67
PDCD6-209ENST00000512466 CYP2C8P10632 490 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 ARSAP15289 507 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 TFEBP19484 476 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 DMPKQ09013 629 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 ZNF470Q6ECI4 717 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 TTC33Q6PID6 262 aaPredicted RBP10.84□□□□□ -0.67
PDCD6-209ENST00000512466 ARCQ7LC44 396 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 APLFQ8IW19 511 aaPredicted RBP10.84□□□□□ -0.67
PDCD6-209ENST00000512466 ZNF567Q8N184 647 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 CHST13Q8NET6 341 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 GPRC5AQ8NFJ5 357 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 MAPK15Q8TD08 544 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 JADE3Q92613 823 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 PARK7Q99497 189 aaKnown RBP10.84□□□□□ -0.67
PDCD6-209ENST00000512466 CCDC106Q9BWC9 280 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 ADNPQ9H2P0 1102 aa10.84□□□□□ -0.67
PDCD6-209ENST00000512466 NOL11Q9H8H0 719 aaKnown RBP10.84□□□□□ -0.67
PDCD6-209ENST00000512466 HEMK1Q9Y5R4 338 aaPredicted RBP10.84□□□□□ -0.67
PDCD6-209ENST00000512466 ARFGEF1Q9Y6D6 1849 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 ANKRD33BA6NCL7 494 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 SOWAHBA6NEL2 793 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 E7ESA3 106 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 H3BSA7 217 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 BOLA2-SMG1P6H3BVE0 249 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 ZBTB24O43167 697 aaPredicted RBP10.83□□□□□ -0.68
PDCD6-209ENST00000512466 ZBTB14O43829 449 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 SLC25A27O95847 323 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 MT-CYBP00156 380 aaPredicted RBP10.83□□□□□ -0.68
PDCD6-209ENST00000512466 GRIA3P42263 894 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 RPL14P50914 215 aaKnown RBP10.83□□□□□ -0.68
PDCD6-209ENST00000512466 ZNF132P52740 706 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 OAZ1P54368 228 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 GRM3Q14832 879 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 NEDD8Q15843 81 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 NADK2Q4G0N4 442 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 MCRS1Q96EZ8 462 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 FICDQ9BVA6 458 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 SIRPGQ9P1W8 387 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 EFR3BQ9Y2G0 817 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 CRYL1Q9Y2S2 319 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 IQCF3P0C7M6 154 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 FGF3P11487 239 aaPredicted RBP10.83□□□□□ -0.68
PDCD6-209ENST00000512466 GFAPP14136 432 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 RPL10P27635 214 aaKnown RBP10.83□□□□□ -0.68
PDCD6-209ENST00000512466 ADCYAP1R1P41586 468 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 MPP1Q00013 466 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 CCNIQ14094 377 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 PCLAFQ15004 111 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 CES4AQ5XG92 561 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 KLC3Q6P597 504 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 PARP8Q8N3A8 854 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 NAT16Q8N8M0 369 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 FNIP1Q8TF40 1166 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 ZNF778Q96MU6 729 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 CDH19Q9H159 772 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 NXF3Q9H4D5 531 aaKnown RBP10.83□□□□□ -0.68
PDCD6-209ENST00000512466 WDCPQ9H6R7 721 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 LAMB1P07942 1786 aa10.83□□□□□ -0.68
PDCD6-209ENST00000512466 B4GALT4O60513 344 aa10.82□□□□□ -0.68
PDCD6-209ENST00000512466 STBD1O95210 358 aa10.82□□□□□ -0.68
PDCD6-209ENST00000512466 CD1EP15812 388 aa10.82□□□□□ -0.68
PDCD6-209ENST00000512466 STMN1P16949 149 aa10.82□□□□□ -0.68
PDCD6-209ENST00000512466 NR4A1P22736 598 aa10.82□□□□□ -0.68
PDCD6-209ENST00000512466 RAP1GDS1P52306 607 aa10.82□□□□□ -0.68
PDCD6-209ENST00000512466 SH3D19Q5HYK7 790 aa10.82□□□□□ -0.68
PDCD6-209ENST00000512466 FAM219BQ5XKK7 198 aa10.82□□□□□ -0.68
PDCD6-209ENST00000512466 ARHGAP17Q68EM7 881 aa10.82□□□□□ -0.68
PDCD6-209ENST00000512466 RGMBQ6NW40 437 aa10.82□□□□□ -0.68
PDCD6-209ENST00000512466 TFAP2DQ7Z6R9 452 aa10.82□□□□□ -0.68
PDCD6-209ENST00000512466 NIPA2Q8N8Q9 360 aa10.82□□□□□ -0.68
PDCD6-209ENST00000512466 DCBLD1Q8N8Z6 715 aa10.82□□□□□ -0.68
PDCD6-209ENST00000512466 GTF3C2Q8WUA4 911 aaPredicted RBP10.82□□□□□ -0.68
PDCD6-209ENST00000512466 GATA6Q92908 595 aa10.82□□□□□ -0.68
PDCD6-209ENST00000512466 NXNL1Q96CM4 212 aa10.82□□□□□ -0.68
PDCD6-209ENST00000512466 YIPF2Q9BWQ6 316 aa10.82□□□□□ -0.68
PDCD6-209ENST00000512466 PAIP1Q9H074 479 aaKnown RBP10.82□□□□□ -0.68
PDCD6-209ENST00000512466 ING2Q9H160 280 aa10.82□□□□□ -0.68
PDCD6-209ENST00000512466 CYP3A43Q9HB55 503 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms