RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 LRSAM1Q6UWE0 723 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 MINDY1Q8N5J2 469 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 ARFGAP1Q8N6T3 406 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 CHST14Q8NCH0 376 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 C1orf216Q8TAB5 229 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 OR8D1Q8WZ84 308 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 VCPIP1Q96JH7 1222 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 PEBP4Q96S96 227 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 TSPY26PQ9H489 355 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 SGK2Q9HBY8 427 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 PARVAQ9NVD7 372 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 TMEM248Q9NWD8 314 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 SUSD2Q9UGT4 822 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 CAPN11Q9UMQ6 739 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 SCML1Q9UN30 329 aa16.87■□□□□ 0.29
DDX41-213ENST00000512027 A0A1B0GTW7 788 aa16.86■□□□□ 0.29
DDX41-213ENST00000512027 TMEM191CA6NGB0 347 aa16.86■□□□□ 0.29
DDX41-213ENST00000512027 BCAT2O15382 392 aaPredicted RBP16.86■□□□□ 0.29
DDX41-213ENST00000512027 RTN2O75298 545 aa16.86■□□□□ 0.29
DDX41-213ENST00000512027 CD160O95971 181 aa16.86■□□□□ 0.29
DDX41-213ENST00000512027 GZMAP12544 262 aa16.86■□□□□ 0.29
DDX41-213ENST00000512027 GNSP15586 552 aa16.86■□□□□ 0.29
DDX41-213ENST00000512027 C5AR1P21730 350 aa16.86■□□□□ 0.29
DDX41-213ENST00000512027 CASP14P31944 242 aa16.86■□□□□ 0.29
DDX41-213ENST00000512027 ATXN3P54252 364 aaPredicted RBP16.86■□□□□ 0.29
DDX41-213ENST00000512027 ZBED6P86452 979 aa16.86■□□□□ 0.29
DDX41-213ENST00000512027 CA9Q16790 459 aa16.86■□□□□ 0.29
DDX41-213ENST00000512027 EFHC2Q5JST6 749 aa16.86■□□□□ 0.29
DDX41-213ENST00000512027 KIAA0895LQ68EN5 471 aa16.86■□□□□ 0.29
DDX41-213ENST00000512027 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.86■□□□□ 0.29
DDX41-213ENST00000512027 RABEPKQ7Z6M1 372 aa16.86■□□□□ 0.29
DDX41-213ENST00000512027 OR2A12Q8NGT7 310 aa16.86■□□□□ 0.29
DDX41-213ENST00000512027 OR14C36Q8NHC7 312 aa16.86■□□□□ 0.29
DDX41-213ENST00000512027 PIP4K2CQ8TBX8 421 aa16.86■□□□□ 0.29
DDX41-213ENST00000512027 ORAI3Q9BRQ5 295 aa16.86■□□□□ 0.29
DDX41-213ENST00000512027 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.86■□□□□ 0.29
DDX41-213ENST00000512027 EBF2Q9HAK2 575 aa16.86■□□□□ 0.29
DDX41-213ENST00000512027 PCSK1NQ9UHG2 260 aa16.86■□□□□ 0.29
DDX41-213ENST00000512027 ADAMTS1Q9UHI8 967 aa16.86■□□□□ 0.29
DDX41-213ENST00000512027 FCF1Q9Y324 198 aaKnown RBP16.86■□□□□ 0.29
DDX41-213ENST00000512027 A0A1B0GVT2 93 aa16.85■□□□□ 0.29
DDX41-213ENST00000512027 MCF2LO15068 1137 aa16.85■□□□□ 0.29
DDX41-213ENST00000512027 ZNF821O75541 412 aaPredicted RBP16.85■□□□□ 0.29
DDX41-213ENST00000512027 KCNK5O95279 499 aa16.85■□□□□ 0.29
DDX41-213ENST00000512027 GOT1P17174 413 aa16.85■□□□□ 0.29
DDX41-213ENST00000512027 EPHB2P29323 1055 aa16.85■□□□□ 0.29
DDX41-213ENST00000512027 MAPKAPK2P49137 400 aa16.85■□□□□ 0.29
DDX41-213ENST00000512027 CSNK1EP49674 416 aaKnown RBP16.85■□□□□ 0.29
DDX41-213ENST00000512027 SERPINH1P50454 418 aaKnown RBP16.85■□□□□ 0.29
DDX41-213ENST00000512027 ADPRHP54922 357 aa16.85■□□□□ 0.29
DDX41-213ENST00000512027 PPP2CBP62714 309 aa16.85■□□□□ 0.29
DDX41-213ENST00000512027 PPP2CAP67775 309 aa16.85■□□□□ 0.29
DDX41-213ENST00000512027 CNTN1Q12860 1018 aa16.85■□□□□ 0.29
DDX41-213ENST00000512027 NFKBIBQ15653 356 aa16.85■□□□□ 0.29
DDX41-213ENST00000512027 PSAPL1Q6NUJ1 521 aa16.85■□□□□ 0.29
DDX41-213ENST00000512027 PPP1R2P3Q6NXS1 205 aa16.85■□□□□ 0.29
DDX41-213ENST00000512027 ZNF783Q6ZMS7 281 aa16.85■□□□□ 0.29
DDX41-213ENST00000512027 NETO2Q8NC67 525 aa16.85■□□□□ 0.29
DDX41-213ENST00000512027 GRIN3AQ8TCU5 1115 aa16.85■□□□□ 0.29
DDX41-213ENST00000512027 ARHGEF2Q92974 986 aaKnown RBP16.85■□□□□ 0.29
DDX41-213ENST00000512027 KLC2Q9H0B6 622 aa16.85■□□□□ 0.29
DDX41-213ENST00000512027 ISCUQ9H1K1 167 aa16.85■□□□□ 0.29
DDX41-213ENST00000512027 PCED1AQ9H1Q7 454 aa16.85■□□□□ 0.29
DDX41-213ENST00000512027 NOL6Q9H6R4 1146 aaKnown RBP16.85■□□□□ 0.29
DDX41-213ENST00000512027 TM9SF3Q9HD45 589 aa16.85■□□□□ 0.29
DDX41-213ENST00000512027 PPM1HQ9ULR3 514 aa16.85■□□□□ 0.29
DDX41-213ENST00000512027 FZD4Q9ULV1 537 aa16.85■□□□□ 0.29
DDX41-213ENST00000512027 A0A087X0T9 212 aa16.84■□□□□ 0.29
DDX41-213ENST00000512027 SERPING1P05155 500 aa16.84■□□□□ 0.29
DDX41-213ENST00000512027 FAM228BP0C875 321 aa16.84■□□□□ 0.29
DDX41-213ENST00000512027 L1CAMP32004 1257 aa16.84■□□□□ 0.29
DDX41-213ENST00000512027 NOVA1P51513 510 aaKnown RBP16.84■□□□□ 0.29
DDX41-213ENST00000512027 SEMA3BQ13214 749 aa16.84■□□□□ 0.29
DDX41-213ENST00000512027 DPY19L3Q6ZPD9 716 aa16.84■□□□□ 0.29
DDX41-213ENST00000512027 CYP4V2Q6ZWL3 525 aaPredicted RBP16.84■□□□□ 0.29
DDX41-213ENST00000512027 DSG4Q86SJ6 1040 aa16.84■□□□□ 0.29
DDX41-213ENST00000512027 RTL3Q8N8U3 475 aaKnown RBP16.84■□□□□ 0.29
DDX41-213ENST00000512027 DEFB124Q8NES8 71 aa16.84■□□□□ 0.29
DDX41-213ENST00000512027 OR2T34Q8NGX1 318 aa16.84■□□□□ 0.29
DDX41-213ENST00000512027 ARRDC3Q96B67 414 aa16.84■□□□□ 0.29
DDX41-213ENST00000512027 SNRNP25Q9BV90 132 aaKnown RBP16.84■□□□□ 0.29
DDX41-213ENST00000512027 ACE2Q9BYF1 805 aaPredicted RBP16.84■□□□□ 0.29
DDX41-213ENST00000512027 TM6SF2Q9BZW4 377 aa16.84■□□□□ 0.29
DDX41-213ENST00000512027 IL21RQ9HBE5 538 aa16.84■□□□□ 0.29
DDX41-213ENST00000512027 ARHGAP20Q9P2F6 1191 aa16.84■□□□□ 0.29
DDX41-213ENST00000512027 AP4E1Q9UPM8 1137 aa16.84■□□□□ 0.29
DDX41-213ENST00000512027 LUC7L2Q9Y383 392 aaKnown RBP16.84■□□□□ 0.29
DDX41-213ENST00000512027 KNL1Q8NG31 2342 aa16.84■□□□□ 0.29
DDX41-213ENST00000512027 LRRC72A6NJI9 287 aa16.83■□□□□ 0.28
DDX41-213ENST00000512027 C1QTNF3-AMACRE9PGA6 284 aa16.83■□□□□ 0.28
DDX41-213ENST00000512027 KPNA3O00505 521 aaPredicted RBP16.83■□□□□ 0.28
DDX41-213ENST00000512027 WNT9AO14904 365 aa16.83■□□□□ 0.28
DDX41-213ENST00000512027 ALOX15BO15296 676 aa16.83■□□□□ 0.28
DDX41-213ENST00000512027 RAMP2O60895 175 aa16.83■□□□□ 0.28
DDX41-213ENST00000512027 SYPP08247 313 aa16.83■□□□□ 0.28
DDX41-213ENST00000512027 TCF4P15884 667 aa16.83■□□□□ 0.28
DDX41-213ENST00000512027 CD27P26842 260 aa16.83■□□□□ 0.28
DDX41-213ENST00000512027 CHRNA3P32297 505 aa16.83■□□□□ 0.28
DDX41-213ENST00000512027 DNA2P51530 1060 aa16.83■□□□□ 0.28
DDX41-213ENST00000512027 FOXK2Q01167 660 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms