RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 ZNF419Q96HQ0 510 aaPredicted RBP13.87□□□□□ -0.19
SNF8-206ENST00000509989 NEUROG2Q9H2A3 272 aa13.87□□□□□ -0.19
SNF8-206ENST00000509989 EBF2Q9HAK2 575 aa13.87□□□□□ -0.19
SNF8-206ENST00000509989 CWC15Q9P013 229 aaKnown RBP13.87□□□□□ -0.19
SNF8-206ENST00000509989 PILRBQ9UKJ0 227 aa13.87□□□□□ -0.19
SNF8-206ENST00000509989 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.86□□□□□ -0.19
SNF8-206ENST00000509989 SSU72P8A0A1W2PR75 194 aa13.86□□□□□ -0.19
SNF8-206ENST00000509989 EEF2KO00418 725 aaKnown RBP13.86□□□□□ -0.19
SNF8-206ENST00000509989 ZBTB24O43167 697 aaPredicted RBP13.86□□□□□ -0.19
SNF8-206ENST00000509989 AKR1B10O60218 316 aa13.86□□□□□ -0.19
SNF8-206ENST00000509989 RNF8O76064 485 aa13.86□□□□□ -0.19
SNF8-206ENST00000509989 DNTTP04053 509 aa13.86□□□□□ -0.19
SNF8-206ENST00000509989 CD48P09326 243 aa13.86□□□□□ -0.19
SNF8-206ENST00000509989 RARAP10276 462 aa13.86□□□□□ -0.19
SNF8-206ENST00000509989 ACADMP11310 421 aa13.86□□□□□ -0.19
SNF8-206ENST00000509989 MAPKAPK2P49137 400 aa13.86□□□□□ -0.19
SNF8-206ENST00000509989 OXCT1P55809 520 aa13.86□□□□□ -0.19
SNF8-206ENST00000509989 TPI1P60174 286 aa13.86□□□□□ -0.19
SNF8-206ENST00000509989 SULT2A1Q06520 285 aa13.86□□□□□ -0.19
SNF8-206ENST00000509989 MMRN1Q13201 1228 aa13.86□□□□□ -0.19
SNF8-206ENST00000509989 FAM182AQ5T1J6 154 aa13.86□□□□□ -0.19
SNF8-206ENST00000509989 DCAF12L1Q5VU92 463 aa13.86□□□□□ -0.19
SNF8-206ENST00000509989 C22orf39Q6P5X5 142 aa13.86□□□□□ -0.19
SNF8-206ENST00000509989 VPS36Q86VN1 386 aa13.86□□□□□ -0.19
SNF8-206ENST00000509989 OR6K2Q8NGY2 324 aa13.86□□□□□ -0.19
SNF8-206ENST00000509989 ZNF564Q8TBZ8 553 aaPredicted RBP13.86□□□□□ -0.19
SNF8-206ENST00000509989 HSPH1Q92598 858 aa13.86□□□□□ -0.19
SNF8-206ENST00000509989 ARRDC3Q96B67 414 aa13.86□□□□□ -0.19
SNF8-206ENST00000509989 ORAI3Q9BRQ5 295 aa13.86□□□□□ -0.19
SNF8-206ENST00000509989 C2orf49Q9BVC5 232 aaPredicted RBP13.86□□□□□ -0.19
SNF8-206ENST00000509989 SLC39A8Q9C0K1 460 aa13.86□□□□□ -0.19
SNF8-206ENST00000509989 MRPL47Q9HD33 250 aaKnown RBP13.86□□□□□ -0.19
SNF8-206ENST00000509989 KLHL11Q9NVR0 708 aa13.86□□□□□ -0.19
SNF8-206ENST00000509989 FBXL12Q9NXK8 326 aa13.86□□□□□ -0.19
SNF8-206ENST00000509989 CTTNBP2NLQ9P2B4 639 aa13.86□□□□□ -0.19
SNF8-206ENST00000509989 LNP1A1A4G5 178 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 FAM47DPA6NHR8 397 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 TMEM110-MUSTN1A8MSY1 372 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 WASH4PA8MWX3 477 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 RASA4BC9J798 803 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 J3KR12 359 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 WNT9AO14904 365 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 RASA4O43374 803 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 PRPSAP2O60256 369 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 NDUFS2O75306 463 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 RNASEH2AO75792 299 aaKnown RBP13.85□□□□□ -0.19
SNF8-206ENST00000509989 IL1BP01584 269 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 ERCC2P18074 760 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 AMPD1P23109 780 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 GJC1P36383 396 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 SERPINH1P50454 418 aaKnown RBP13.85□□□□□ -0.19
SNF8-206ENST00000509989 VASPP50552 380 aaPredicted RBP13.85□□□□□ -0.19
SNF8-206ENST00000509989 KRT83P78385 493 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 BYSLQ13895 437 aaKnown RBP13.85□□□□□ -0.19
SNF8-206ENST00000509989 POLD3Q15054 466 aaPredicted RBP13.85□□□□□ -0.19
SNF8-206ENST00000509989 ATXN7L2Q5T6C5 722 aaPredicted RBP13.85□□□□□ -0.19
SNF8-206ENST00000509989 LAYNQ6UX15 382 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 SLC36A4Q6YBV0 504 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 ZNF783Q6ZMS7 281 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 DPY19L3Q6ZPD9 716 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 ARHGAP12Q8IWW6 846 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 HDDC3Q8N4P3 179 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 PIP4K2CQ8TBX8 421 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 EPAS1Q99814 870 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 TM6SF2Q9BZW4 377 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 LRRC19Q9H756 370 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 VPS45Q9NRW7 570 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 EIF2B4Q9UI10 523 aaKnown RBP13.85□□□□□ -0.19
SNF8-206ENST00000509989 PPM1HQ9ULR3 514 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 HYOU1Q9Y4L1 999 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 PCDHGA5Q9Y5G8 931 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 WASF2Q9Y6W5 498 aa13.85□□□□□ -0.19
SNF8-206ENST00000509989 METTL12A8MUP2 240 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 C10orf142B7Z368 130 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 MCF2LO15068 1137 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 KDELR3O43731 214 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 RAMP2O60895 175 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 GJB3O75712 270 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 IGHV4-34P06331 123 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 H2AFZP0C0S5 128 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 IL4RP24394 825 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 PCK1P35558 622 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 NNMTP40261 264 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 ARSEP51690 589 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 PPP2CBP62714 309 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 PPP2CAP67775 309 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 BNC1Q01954 994 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 CNTN1Q12860 1018 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 DPYSQ14117 519 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 TRIM61Q5EBN2 209 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 ARSIQ5FYB1 569 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 ACBD5Q5T8D3 534 aaPredicted RBP13.84□□□□□ -0.19
SNF8-206ENST00000509989 PEAR1Q5VY43 1037 aaPredicted RBP13.84□□□□□ -0.19
SNF8-206ENST00000509989 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.84□□□□□ -0.19
SNF8-206ENST00000509989 RFX8Q6ZV50 586 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 H2AFVQ71UI9 128 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 C11orf74Q86VG3 221 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 SYT12Q8IV01 421 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 NIPA2Q8N8Q9 360 aa13.84□□□□□ -0.19
SNF8-206ENST00000509989 C1orf216Q8TAB5 229 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms