RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 DSG4Q86SJ6 1040 aa15.4■□□□□ 0.06
TRIO-211ENST00000508343 PSTKQ8IV42 348 aaKnown RBP15.4■□□□□ 0.06
TRIO-211ENST00000508343 RTL3Q8N8U3 475 aaKnown RBP15.4■□□□□ 0.06
TRIO-211ENST00000508343 DNASE2BQ8WZ79 361 aa15.4■□□□□ 0.06
TRIO-211ENST00000508343 ARHGEF2Q92974 986 aaKnown RBP15.4■□□□□ 0.06
TRIO-211ENST00000508343 PEBP4Q96S96 227 aa15.4■□□□□ 0.06
TRIO-211ENST00000508343 OMDQ99983 421 aa15.4■□□□□ 0.06
TRIO-211ENST00000508343 NUP85Q9BW27 656 aa15.4■□□□□ 0.06
TRIO-211ENST00000508343 DHX35Q9H5Z1 703 aaKnown RBP15.4■□□□□ 0.06
TRIO-211ENST00000508343 CATSPERBQ9H7T0 1116 aa15.4■□□□□ 0.06
TRIO-211ENST00000508343 RXFP3Q9NSD7 469 aa15.4■□□□□ 0.06
TRIO-211ENST00000508343 DLL3Q9NYJ7 618 aa15.4■□□□□ 0.06
TRIO-211ENST00000508343 CDV3Q9UKY7 258 aaKnown RBP15.4■□□□□ 0.06
TRIO-211ENST00000508343 PPM1HQ9ULR3 514 aa15.4■□□□□ 0.06
TRIO-211ENST00000508343 AP4E1Q9UPM8 1137 aa15.4■□□□□ 0.06
TRIO-211ENST00000508343 FARP1Q9Y4F1 1045 aaPredicted RBP15.4■□□□□ 0.06
TRIO-211ENST00000508343 CEP192Q8TEP8 1941 aa15.4■□□□□ 0.06
TRIO-211ENST00000508343 DNAH14Q0VDD8 3507 aa15.4■□□□□ 0.06
TRIO-211ENST00000508343 A0A1W2PP55 124 aa15.39■□□□□ 0.05
TRIO-211ENST00000508343 MEI4A8MW99 385 aa15.39■□□□□ 0.05
TRIO-211ENST00000508343 FGF10O15520 208 aaPredicted RBP15.39■□□□□ 0.05
TRIO-211ENST00000508343 RNASEH2AO75792 299 aaKnown RBP15.39■□□□□ 0.05
TRIO-211ENST00000508343 SEMA4FO95754 770 aa15.39■□□□□ 0.05
TRIO-211ENST00000508343 GOT1P17174 413 aa15.39■□□□□ 0.05
TRIO-211ENST00000508343 LIMK1P53667 647 aa15.39■□□□□ 0.05
TRIO-211ENST00000508343 IRX4P78413 519 aa15.39■□□□□ 0.05
TRIO-211ENST00000508343 ARF5P84085 180 aa15.39■□□□□ 0.05
TRIO-211ENST00000508343 TBX2Q13207 712 aaPredicted RBP15.39■□□□□ 0.05
TRIO-211ENST00000508343 DUOXA1Q1HG43 343 aa15.39■□□□□ 0.05
TRIO-211ENST00000508343 TRIM61Q5EBN2 209 aa15.39■□□□□ 0.05
TRIO-211ENST00000508343 DCAF12L1Q5VU92 463 aa15.39■□□□□ 0.05
TRIO-211ENST00000508343 FAM46CQ5VWP2 391 aa15.39■□□□□ 0.05
TRIO-211ENST00000508343 SLC23A3Q6PIS1 610 aa15.39■□□□□ 0.05
TRIO-211ENST00000508343 CNGA4Q8IV77 575 aa15.39■□□□□ 0.05
TRIO-211ENST00000508343 ARHGEF26Q96DR7 871 aa15.39■□□□□ 0.05
TRIO-211ENST00000508343 CCDC114Q96M63 670 aa15.39■□□□□ 0.05
TRIO-211ENST00000508343 SNRNP25Q9BV90 132 aaKnown RBP15.39■□□□□ 0.05
TRIO-211ENST00000508343 NUSAP1Q9BXS6 441 aaKnown RBP15.39■□□□□ 0.05
TRIO-211ENST00000508343 CEP44Q9C0F1 390 aa15.39■□□□□ 0.05
TRIO-211ENST00000508343 RBSNQ9H1K0 784 aa15.39■□□□□ 0.05
TRIO-211ENST00000508343 NEUROG2Q9H2A3 272 aa15.39■□□□□ 0.05
TRIO-211ENST00000508343 DEF6Q9H4E7 631 aa15.39■□□□□ 0.05
TRIO-211ENST00000508343 GPATCH2LQ9NWQ4 482 aa15.39■□□□□ 0.05
TRIO-211ENST00000508343 DONSONQ9NYP3 566 aa15.39■□□□□ 0.05
TRIO-211ENST00000508343 SUSD2Q9UGT4 822 aa15.39■□□□□ 0.05
TRIO-211ENST00000508343 IP6K2Q9UHH9 426 aa15.39■□□□□ 0.05
TRIO-211ENST00000508343 FZD4Q9ULV1 537 aa15.39■□□□□ 0.05
TRIO-211ENST00000508343 HPCAL4Q9UM19 191 aa15.39■□□□□ 0.05
TRIO-211ENST00000508343 ATXN2Q99700 1313 aaKnown RBP15.39■□□□□ 0.05
TRIO-211ENST00000508343 AKR1B15C9JRZ8 316 aaPredicted RBP15.38■□□□□ 0.05
TRIO-211ENST00000508343 MYO1FO00160 1098 aa15.38■□□□□ 0.05
TRIO-211ENST00000508343 KDELR3O43731 214 aa15.38■□□□□ 0.05
TRIO-211ENST00000508343 AKR1B10O60218 316 aa15.38■□□□□ 0.05
TRIO-211ENST00000508343 BNIP3LO60238 219 aa15.38■□□□□ 0.05
TRIO-211ENST00000508343 SERPINF2P08697 491 aa15.38■□□□□ 0.05
TRIO-211ENST00000508343 GNSP15586 552 aa15.38■□□□□ 0.05
TRIO-211ENST00000508343 MAOBP27338 520 aa15.38■□□□□ 0.05
TRIO-211ENST00000508343 SERPINH1P50454 418 aaKnown RBP15.38■□□□□ 0.05
TRIO-211ENST00000508343 GEMIN4P57678 1058 aaKnown RBP15.38■□□□□ 0.05
TRIO-211ENST00000508343 YBEYP58557 167 aaPredicted RBP15.38■□□□□ 0.05
TRIO-211ENST00000508343 TPI1P60174 286 aa15.38■□□□□ 0.05
TRIO-211ENST00000508343 CA9Q16790 459 aa15.38■□□□□ 0.05
TRIO-211ENST00000508343 BOLA3Q53S33 107 aa15.38■□□□□ 0.05
TRIO-211ENST00000508343 CYP4V2Q6ZWL3 525 aaPredicted RBP15.38■□□□□ 0.05
TRIO-211ENST00000508343 UMODL1-AS1Q8N2C9 162 aa15.38■□□□□ 0.05
TRIO-211ENST00000508343 HDDC3Q8N4P3 179 aa15.38■□□□□ 0.05
TRIO-211ENST00000508343 AADATQ8N5Z0 425 aa15.38■□□□□ 0.05
TRIO-211ENST00000508343 NIPA2Q8N8Q9 360 aa15.38■□□□□ 0.05
TRIO-211ENST00000508343 OR2A12Q8NGT7 310 aa15.38■□□□□ 0.05
TRIO-211ENST00000508343 CCDC42Q96M95 316 aa15.38■□□□□ 0.05
TRIO-211ENST00000508343 CHP1Q99653 195 aa15.38■□□□□ 0.05
TRIO-211ENST00000508343 C6orf106Q9H6K1 298 aaPredicted RBP15.38■□□□□ 0.05
TRIO-211ENST00000508343 NOL6Q9H6R4 1146 aaKnown RBP15.38■□□□□ 0.05
TRIO-211ENST00000508343 SERGEFQ9UGK8 458 aa15.38■□□□□ 0.05
TRIO-211ENST00000508343 ANAPC7Q9UJX3 599 aa15.38■□□□□ 0.05
TRIO-211ENST00000508343 SARDHQ9UL12 918 aa15.38■□□□□ 0.05
TRIO-211ENST00000508343 SLC6A14Q9UN76 642 aa15.38■□□□□ 0.05
TRIO-211ENST00000508343 TNRC6BQ9UPQ9 1833 aaKnown RBP15.38■□□□□ 0.05
TRIO-211ENST00000508343 NUMA1Q14980 2115 aa15.37■□□□□ 0.05
TRIO-211ENST00000508343 LAMA1P25391 3075 aa15.37■□□□□ 0.05
TRIO-211ENST00000508343 LNP1A1A4G5 178 aa15.37■□□□□ 0.05
TRIO-211ENST00000508343 C1QTNF3-AMACRE9PGA6 284 aa15.37■□□□□ 0.05
TRIO-211ENST00000508343 EEF2KO00418 725 aaKnown RBP15.37■□□□□ 0.05
TRIO-211ENST00000508343 SLC30A4O14863 429 aa15.37■□□□□ 0.05
TRIO-211ENST00000508343 DAPK3O43293 454 aa15.37■□□□□ 0.05
TRIO-211ENST00000508343 ZNF821O75541 412 aaPredicted RBP15.37■□□□□ 0.05
TRIO-211ENST00000508343 CD160O95971 181 aa15.37■□□□□ 0.05
TRIO-211ENST00000508343 CFIP05156 583 aa15.37■□□□□ 0.05
TRIO-211ENST00000508343 H2AFZP0C0S5 128 aa15.37■□□□□ 0.05
TRIO-211ENST00000508343 CHRNA3P32297 505 aa15.37■□□□□ 0.05
TRIO-211ENST00000508343 RECQLP46063 649 aaPredicted RBP15.37■□□□□ 0.05
TRIO-211ENST00000508343 ZNF135P52742 658 aaPredicted RBP15.37■□□□□ 0.05
TRIO-211ENST00000508343 PARP15Q460N3 678 aa15.37■□□□□ 0.05
TRIO-211ENST00000508343 STPG1Q5TH74 334 aa15.37■□□□□ 0.05
TRIO-211ENST00000508343 C22orf39Q6P5X5 142 aa15.37■□□□□ 0.05
TRIO-211ENST00000508343 H2AFVQ71UI9 128 aa15.37■□□□□ 0.05
TRIO-211ENST00000508343 ZNF354CQ86Y25 554 aa15.37■□□□□ 0.05
TRIO-211ENST00000508343 PCDH20Q8N6Y1 951 aaKnown RBP15.37■□□□□ 0.05
TRIO-211ENST00000508343 TMIEQ8NEW7 156 aa15.37■□□□□ 0.05
TRIO-211ENST00000508343 PIP4K2CQ8TBX8 421 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms