RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 PDZD3Q86UT5 571 aa6.61□□□□□ -1.35
HMGN1P16-201ENST00000508308 SLC25A45Q8N413 288 aa6.61□□□□□ -1.35
HMGN1P16-201ENST00000508308 SH2D3CQ8N5H7 860 aa6.61□□□□□ -1.35
HMGN1P16-201ENST00000508308 ZSCAN1Q8NBB4 408 aa6.61□□□□□ -1.35
HMGN1P16-201ENST00000508308 ZNF397Q8NF99 534 aaPredicted RBP6.61□□□□□ -1.35
HMGN1P16-201ENST00000508308 HNRNPLLQ8WVV9 542 aaKnown RBP6.61□□□□□ -1.35
HMGN1P16-201ENST00000508308 CRELD1Q96HD1 420 aa6.61□□□□□ -1.35
HMGN1P16-201ENST00000508308 SERAC1Q96JX3 654 aa6.61□□□□□ -1.35
HMGN1P16-201ENST00000508308 RPRD1AQ96P16 312 aaPredicted RBP6.61□□□□□ -1.35
HMGN1P16-201ENST00000508308 BBC3Q96PG8 261 aaPredicted RBP6.61□□□□□ -1.35
HMGN1P16-201ENST00000508308 SPAG5Q96R06 1193 aa6.61□□□□□ -1.35
HMGN1P16-201ENST00000508308 NPY6RQ99463 290 aa6.61□□□□□ -1.35
HMGN1P16-201ENST00000508308 NAA15Q9BXJ9 866 aaKnown RBP6.61□□□□□ -1.35
HMGN1P16-201ENST00000508308 RAB6CQ9H0N0 254 aa6.61□□□□□ -1.35
HMGN1P16-201ENST00000508308 AASDHPPTQ9NRN7 309 aa6.61□□□□□ -1.35
HMGN1P16-201ENST00000508308 ARHGEF38Q9NXL2 777 aa6.61□□□□□ -1.35
HMGN1P16-201ENST00000508308 GMPR2Q9P2T1 348 aaKnown RBP6.61□□□□□ -1.35
HMGN1P16-201ENST00000508308 DACH1Q9UI36 760 aa6.61□□□□□ -1.35
HMGN1P16-201ENST00000508308 DNAJC12Q9UKB3 198 aa6.61□□□□□ -1.35
HMGN1P16-201ENST00000508308 CA5BQ9Y2D0 317 aa6.61□□□□□ -1.35
HMGN1P16-201ENST00000508308 CEP83Q9Y592 693 aa6.61□□□□□ -1.35
HMGN1P16-201ENST00000508308 TENM4Q6N022 2769 aa6.61□□□□□ -1.35
HMGN1P16-201ENST00000508308 TRPM6Q9BX84 2022 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 IGLV3-10A0A075B6K4 115 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 TBC1D3DA0A087WVF3 549 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 TBC1D3IA0A087WXS9 549 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 TBC1D3EA0A087X179 549 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 TBC1D3KA0A087X1G2 549 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 A0A0D9SEW6 157 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 TBC1D3FA6NER0 549 aaPredicted RBP6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 DRGXA6NNA5 263 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 TBC1D3LB9A6J9 549 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 M0QYT0 321 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 ENC1O14682 589 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 CLDN11O75508 207 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 TBC1D3HP0C7X1 549 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 GIMD1P0DJR0 217 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 SLC2A3P11169 496 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 ABCB4P21439 1286 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 GLDCP23378 1020 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 MAT2AP31153 395 aaKnown RBP6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 CDH5P33151 784 aaPredicted RBP6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 NOS2P35228 1153 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 FLT3P36888 993 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 SLC19A1P41440 591 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 GABRB2P47870 512 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 ACADVLP49748 655 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 SFSWAPQ12872 951 aaKnown RBP6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 C2CD6Q53TS8 623 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 RABGAP1LQ5R372 815 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 TTC39BQ5VTQ0 682 aaPredicted RBP6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 RNF219Q5W0B1 726 aaPredicted RBP6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 TBC1D3GQ6DHY5 549 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 OR6B2Q6IFH4 312 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 TBC1D3CQ6IPX1 549 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 NAPEPLDQ6IQ20 393 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 FBXL19Q6PCT2 694 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 TMPRSS12Q86WS5 348 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 TRIM69Q86WT6 500 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 CCDC117Q8IWD4 279 aaPredicted RBP6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 TBC1D3Q8IZP1 549 aaPredicted RBP6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 EID2Q8N6I1 236 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 MFSD2AQ8NA29 543 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 TMEM145Q8NBT3 493 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 CHST14Q8NCH0 376 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 OR2A12Q8NGT7 310 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 PIP4K2CQ8TBX8 421 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 OR8D1Q8WZ84 308 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 RNF34Q969K3 372 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 ARRDC3Q96B67 414 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 PGAP3Q96FM1 320 aaPredicted RBP6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 CNDP2Q96KP4 475 aaKnown RBP6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 TBCBQ99426 244 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 MAGEB5Q9BZ81 275 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 TKTL2Q9H0I9 626 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 SIK2Q9H0K1 926 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 KDM4CQ9H3R0 1056 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 ERVMER34-1Q9H9K5 563 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 GDF3Q9NR23 364 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 MPP6Q9NZW5 540 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 FTSJ1Q9UET6 329 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 SLC12A6Q9UHW9 1150 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 VPS51Q9UID3 782 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 VPS28Q9UK41 221 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 HS3ST2Q9Y278 367 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 PCDHGA1Q9Y5H4 931 aa6.6□□□□□ -1.35
HMGN1P16-201ENST00000508308 FLNBO75369 2602 aaKnown RBP6.59□□□□□ -1.35
HMGN1P16-201ENST00000508308 A0A087WV48 116 aa6.59□□□□□ -1.35
HMGN1P16-201ENST00000508308 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.59□□□□□ -1.35
HMGN1P16-201ENST00000508308 TRIM38O00635 465 aa6.59□□□□□ -1.35
HMGN1P16-201ENST00000508308 ALOX15BO15296 676 aa6.59□□□□□ -1.35
HMGN1P16-201ENST00000508308 SLC7A4O43246 635 aa6.59□□□□□ -1.35
HMGN1P16-201ENST00000508308 RNGTTO60942 597 aaKnown RBP6.59□□□□□ -1.35
HMGN1P16-201ENST00000508308 SDC3O75056 442 aa6.59□□□□□ -1.35
HMGN1P16-201ENST00000508308 ZMPSTE24O75844 475 aa6.59□□□□□ -1.35
HMGN1P16-201ENST00000508308 FGFR1OPO95684 399 aaKnown RBP6.59□□□□□ -1.35
HMGN1P16-201ENST00000508308 LDOC1O95751 146 aaPredicted RBP6.59□□□□□ -1.35
HMGN1P16-201ENST00000508308 CD160O95971 181 aa6.59□□□□□ -1.35
HMGN1P16-201ENST00000508308 ITGAVP06756 1048 aa6.59□□□□□ -1.35
HMGN1P16-201ENST00000508308 CYP11B1P15538 503 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms