RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 HOXC10Q9NYD6 342 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 BFARQ9NZS9 450 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 IGSF9Q9P2J2 1179 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 SUCOQ9UBS9 1254 aaKnown RBP5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 GTF2IRD1Q9UHL9 959 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 RIMS3Q9UJD0 308 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 PTBP2Q9UKA9 531 aaKnown RBP5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 TLK1Q9UKI8 766 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 TRPC5Q9UL62 973 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 GNEQ9Y223 722 aaKnown RBP5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 MYRFQ9Y2G1 1151 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 AP4S1Q9Y587 144 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZNF646O15015 1829 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 COL11A2P13942 1736 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 SCN9AQ15858 1988 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 A0A087WXM4 84 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 PRSS51A0A1B0GVH4 220 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 ARHGEF37A1IGU5 675 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 FAM181BA6NEQ2 426 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 YDJCA8MPS7 323 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 E9PBE3 544 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 INO80B-WBP1J3KQ70 363 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 MATN2O00339 956 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 HNRNPRO43390 633 aaKnown RBP5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 KLHL41O60662 606 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 NOL3O60936 208 aaKnown RBP5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 CBFA2T3O75081 653 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 CABYRO75952 493 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 DDHD2O94830 711 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 H6PDO95479 791 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 PYGLP06737 847 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 C8BP07358 591 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 IL4RP24394 825 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 YY1P25490 414 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 MGAT1P26572 445 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 PSMD8P48556 350 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 NPY2RP49146 381 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 PSMD7P51665 324 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 THOP1P52888 689 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 HIRAP54198 1017 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 BACE1P56817 501 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 MRPS22P82650 360 aaKnown RBP5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 TXNL4AP83876 142 aaKnown RBP5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 PPIDQ08752 370 aaKnown RBP5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZBTB17Q13105 803 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 TMED1Q13445 227 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 PTK2BQ14289 1009 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 PRPSAP1Q14558 356 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 LPIN1Q14693 890 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 TMEM132DQ14C87 1099 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 CDO1Q16878 200 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 FAM187BQ17R55 369 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 C15orf59Q2T9L4 293 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 ANO4Q32M45 955 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 MYLK3Q32MK0 819 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 MAP7D1Q3KQU3 841 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 SPATS1Q496A3 300 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 KCTD21Q4G0X4 260 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 SEZ6Q53EL9 994 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 OXLD1Q5BKU9 147 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 PPP6R3Q5H9R7 873 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 FAM182BQ5T319 152 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 MEX3CQ5U5Q3 659 aaKnown RBP5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 LIPMQ5VYY2 423 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 OLFML2BQ68BL8 750 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 DHRS4L2Q6PKH6 230 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 OLFML1Q6UWY5 402 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 RNF111Q6ZNA4 994 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 SLC26A9Q7LBE3 791 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 STRADAQ7RTN6 431 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 PLPPR4Q7Z2D5 763 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 STRA8Q7Z7C7 330 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 TMEM110Q86TL2 294 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 UNC93AQ86WB7 457 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 NIM1KQ8IY84 436 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 COLGALT2Q8IYK4 626 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 MPP5Q8N3R9 675 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 COLGALT1Q8NBJ5 622 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 RNF149Q8NC42 400 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 BHLHE22Q8NFJ8 381 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 CEP70Q8NHQ1 597 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZFP28Q8NHY6 868 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 CXorf38Q8TB03 319 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 SLC7A14Q8TBB6 771 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 UBA3Q8TBC4 463 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 URGCPQ8TCY9 931 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 KBTBD7Q8WVZ9 684 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 RSPH1Q8WYR4 309 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 CENPIQ92674 756 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 ASB9Q96DX5 294 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 CCDC126Q96EE4 140 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 DUS3LQ96G46 650 aaKnown RBP5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 RMND5BQ96G75 393 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZBED3Q96IU2 234 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 VPS50Q96JG6 964 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZNF597Q96LX8 424 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 LENG8Q96PV6 779 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 CSPG4P5Q96PW8 444 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 VAT1Q99536 393 aa5.05□□□□□ -1.6
HMGB3P16-201ENST00000508037 PRPF18Q99633 342 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms