RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 TBC1D3HP0C7X1 549 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 C5AR1P21730 350 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 GALCP54803 685 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 SFSWAPQ12872 951 aaKnown RBP14.58□□□□□ -0.08
HOXC9-202ENST00000504557 GRIK2Q13002 908 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 MAMLD1Q13495 774 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 PPP1R15BQ5SWA1 713 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 ARTNQ5T4W7 220 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 KIAA0895LQ68EN5 471 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 TBC1D3GQ6DHY5 549 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 TBC1D3CQ6IPX1 549 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 C22orf39Q6P5X5 142 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 USP30Q70CQ3 517 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 ADAT2Q7Z6V5 191 aaKnown RBP14.58□□□□□ -0.08
HOXC9-202ENST00000504557 DSG4Q86SJ6 1040 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 TBC1D3Q8IZP1 549 aaPredicted RBP14.58□□□□□ -0.08
HOXC9-202ENST00000504557 PIP4K2CQ8TBX8 421 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 DNASE2BQ8WZ79 361 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 TRIM7Q9C029 511 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 XPO4Q9C0E2 1151 aaKnown RBP14.58□□□□□ -0.08
HOXC9-202ENST00000504557 OSBPL2Q9H1P3 480 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 TSPY26PQ9H489 355 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 PARVAQ9NVD7 372 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 PPARGC1AQ9UBK2 798 aaKnown RBP14.58□□□□□ -0.08
HOXC9-202ENST00000504557 ZNF212Q9UDV6 495 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 FCF1Q9Y324 198 aaKnown RBP14.58□□□□□ -0.08
HOXC9-202ENST00000504557 FARP1Q9Y4F1 1045 aaPredicted RBP14.58□□□□□ -0.08
HOXC9-202ENST00000504557 SHROOM3Q8TF72 1996 aa14.58□□□□□ -0.08
HOXC9-202ENST00000504557 LRRC72A6NJI9 287 aa14.57□□□□□ -0.08
HOXC9-202ENST00000504557 C1QTNF3-AMACRE9PGA6 284 aa14.57□□□□□ -0.08
HOXC9-202ENST00000504557 TM4SF5O14894 197 aa14.57□□□□□ -0.08
HOXC9-202ENST00000504557 RHOQP17081 205 aa14.57□□□□□ -0.08
HOXC9-202ENST00000504557 GOT1P17174 413 aa14.57□□□□□ -0.08
HOXC9-202ENST00000504557 EPHB2P29323 1055 aa14.57□□□□□ -0.08
HOXC9-202ENST00000504557 MAT2AP31153 395 aaKnown RBP14.57□□□□□ -0.08
HOXC9-202ENST00000504557 PBX1P40424 430 aa14.57□□□□□ -0.08
HOXC9-202ENST00000504557 PRKCIP41743 596 aa14.57□□□□□ -0.08
HOXC9-202ENST00000504557 RECQLP46063 649 aaPredicted RBP14.57□□□□□ -0.08
HOXC9-202ENST00000504557 ADPRHP54922 357 aa14.57□□□□□ -0.08
HOXC9-202ENST00000504557 MANEALQ5VSG8 457 aa14.57□□□□□ -0.08
HOXC9-202ENST00000504557 RETSATQ6NUM9 610 aa14.57□□□□□ -0.08
HOXC9-202ENST00000504557 RYBPQ8N488 228 aaPredicted RBP14.57□□□□□ -0.08
HOXC9-202ENST00000504557 NETO2Q8NC67 525 aa14.57□□□□□ -0.08
HOXC9-202ENST00000504557 CHST14Q8NCH0 376 aa14.57□□□□□ -0.08
HOXC9-202ENST00000504557 CCDC114Q96M63 670 aa14.57□□□□□ -0.08
HOXC9-202ENST00000504557 EDEM3Q9BZQ6 932 aa14.57□□□□□ -0.08
HOXC9-202ENST00000504557 TM6SF2Q9BZW4 377 aa14.57□□□□□ -0.08
HOXC9-202ENST00000504557 IL21RQ9HBE5 538 aa14.57□□□□□ -0.08
HOXC9-202ENST00000504557 ADAMTS1Q9UHI8 967 aa14.57□□□□□ -0.08
HOXC9-202ENST00000504557 FZD10Q9ULW2 581 aa14.57□□□□□ -0.08
HOXC9-202ENST00000504557 HS3ST2Q9Y278 367 aa14.57□□□□□ -0.08
HOXC9-202ENST00000504557 TDRD6O60522 2096 aaKnown RBP14.57□□□□□ -0.08
HOXC9-202ENST00000504557 ANKRD36A6QL64 1941 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 TRPM6Q9BX84 2022 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 NCOR2Q9Y618 2525 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 CABIN1Q9Y6J0 2220 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 MCF2LO15068 1137 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 CTSLP07711 333 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 CHRNA3P32297 505 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 DRD3P35462 400 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 ARF5P84085 180 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 CNTN1Q12860 1018 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 POLD3Q15054 466 aaPredicted RBP14.56□□□□□ -0.08
HOXC9-202ENST00000504557 FIGNQ5HY92 759 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 N4BP2L1Q5TBK1 243 aaPredicted RBP14.56□□□□□ -0.08
HOXC9-202ENST00000504557 FAM46CQ5VWP2 391 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 PLEKHA7Q6IQ23 1121 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 PPP1R2P3Q6NXS1 205 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 NLRP14Q86W24 1093 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 OR2A12Q8NGT7 310 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 OR2T34Q8NGX1 318 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 OR6K2Q8NGY2 324 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 ARHGEF2Q92974 986 aaKnown RBP14.56□□□□□ -0.08
HOXC9-202ENST00000504557 NTAN1Q96AB6 310 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 VCPIP1Q96JH7 1222 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 SLC6A18Q96N87 628 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 EPAS1Q99814 870 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 PCED1AQ9H1Q7 454 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 DHX35Q9H5Z1 703 aaKnown RBP14.56□□□□□ -0.08
HOXC9-202ENST00000504557 GAREM1Q9H706 876 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 TM9SF3Q9HD45 589 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 AASDHPPTQ9NRN7 309 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 TMEM248Q9NWD8 314 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 FZD4Q9ULV1 537 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 HPCAL4Q9UM19 191 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 NEU3Q9UQ49 428 aa14.56□□□□□ -0.08
HOXC9-202ENST00000504557 LUC7L2Q9Y383 392 aaKnown RBP14.56□□□□□ -0.08
HOXC9-202ENST00000504557 A0A1W2PQJ5 194 aa14.55□□□□□ -0.08
HOXC9-202ENST00000504557 RNF103O00237 685 aa14.55□□□□□ -0.08
HOXC9-202ENST00000504557 KCNK3O14649 394 aa14.55□□□□□ -0.08
HOXC9-202ENST00000504557 RAMP2O60895 175 aa14.55□□□□□ -0.08
HOXC9-202ENST00000504557 RNF8O76064 485 aa14.55□□□□□ -0.08
HOXC9-202ENST00000504557 GYPCP04921 128 aa14.55□□□□□ -0.08
HOXC9-202ENST00000504557 SERPING1P05155 500 aa14.55□□□□□ -0.08
HOXC9-202ENST00000504557 IGHV4-34P06331 123 aa14.55□□□□□ -0.08
HOXC9-202ENST00000504557 TPM3P06753 285 aa14.55□□□□□ -0.08
HOXC9-202ENST00000504557 GZMAP12544 262 aa14.55□□□□□ -0.08
HOXC9-202ENST00000504557 CD27P26842 260 aa14.55□□□□□ -0.08
HOXC9-202ENST00000504557 CASP14P31944 242 aa14.55□□□□□ -0.08
HOXC9-202ENST00000504557 L1CAMP32004 1257 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms