RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 BRCC3P46736 316 aa14.82□□□□□ -0.04
NEAT1-201ENST00000499732 POLE2P56282 527 aa14.82□□□□□ -0.04
NEAT1-201ENST00000499732 PDE1BQ01064 536 aa14.82□□□□□ -0.04
NEAT1-201ENST00000499732 DSC1Q08554 894 aa14.82□□□□□ -0.04
NEAT1-201ENST00000499732 ASPHQ12797 758 aa14.82□□□□□ -0.04
NEAT1-201ENST00000499732 IKBKEQ14164 716 aa14.82□□□□□ -0.04
NEAT1-201ENST00000499732 DPYSL2Q16555 572 aa14.82□□□□□ -0.04
NEAT1-201ENST00000499732 SCYL2Q6P3W7 929 aa14.82□□□□□ -0.04
NEAT1-201ENST00000499732 PGM2L1Q6PCE3 622 aa14.82□□□□□ -0.04
NEAT1-201ENST00000499732 DCLRE1AQ6PJP8 1040 aa14.82□□□□□ -0.04
NEAT1-201ENST00000499732 CLEC20AQ6ZU45 233 aa14.82□□□□□ -0.04
NEAT1-201ENST00000499732 RAPH1Q70E73 1250 aa14.82□□□□□ -0.04
NEAT1-201ENST00000499732 ABI1Q8IZP0 508 aa14.82□□□□□ -0.04
NEAT1-201ENST00000499732 CRIPAKQ8N1N5 446 aa14.82□□□□□ -0.04
NEAT1-201ENST00000499732 MPP5Q8N3R9 675 aa14.82□□□□□ -0.04
NEAT1-201ENST00000499732 PIP4K2CQ8TBX8 421 aa14.82□□□□□ -0.04
NEAT1-201ENST00000499732 TRIM43Q96BQ3 446 aaPredicted RBP14.82□□□□□ -0.04
NEAT1-201ENST00000499732 CMTM5Q96DZ9 223 aa14.82□□□□□ -0.04
NEAT1-201ENST00000499732 RTP3Q9BQQ7 232 aa14.82□□□□□ -0.04
NEAT1-201ENST00000499732 NGRNQ9NPE2 291 aaKnown RBP14.82□□□□□ -0.04
NEAT1-201ENST00000499732 CDH9Q9ULB4 789 aa14.82□□□□□ -0.04
NEAT1-201ENST00000499732 EMCNQ9ULC0 261 aa14.82□□□□□ -0.04
NEAT1-201ENST00000499732 PTPRDP23468 1912 aa14.82□□□□□ -0.04
NEAT1-201ENST00000499732 MYBPHLA2RUH7 354 aa14.81□□□□□ -0.04
NEAT1-201ENST00000499732 ARHGAP42A6NI28 874 aa14.81□□□□□ -0.04
NEAT1-201ENST00000499732 M0QZQ0 153 aa14.81□□□□□ -0.04
NEAT1-201ENST00000499732 B4GALT3O60512 393 aa14.81□□□□□ -0.04
NEAT1-201ENST00000499732 SIN3BO75182 1162 aa14.81□□□□□ -0.04
NEAT1-201ENST00000499732 USP1O94782 785 aa14.81□□□□□ -0.04
NEAT1-201ENST00000499732 CYP11A1P05108 521 aa14.81□□□□□ -0.04
NEAT1-201ENST00000499732 SMAD3P84022 425 aaKnown RBP14.81□□□□□ -0.04
NEAT1-201ENST00000499732 DEUP1Q05D60 604 aa14.81□□□□□ -0.04
NEAT1-201ENST00000499732 PCLAFQ15004 111 aa14.81□□□□□ -0.04
NEAT1-201ENST00000499732 SHHQ15465 462 aa14.81□□□□□ -0.04
NEAT1-201ENST00000499732 LIN52Q52LA3 116 aa14.81□□□□□ -0.04
NEAT1-201ENST00000499732 N4BP2L1Q5TBK1 243 aaPredicted RBP14.81□□□□□ -0.04
NEAT1-201ENST00000499732 RASSF3Q86WH2 238 aa14.81□□□□□ -0.04
NEAT1-201ENST00000499732 NPAS4Q8IUM7 802 aa14.81□□□□□ -0.04
NEAT1-201ENST00000499732 KCTD13Q8WZ19 329 aa14.81□□□□□ -0.04
NEAT1-201ENST00000499732 PCED1BQ96HM7 432 aa14.81□□□□□ -0.04
NEAT1-201ENST00000499732 C11orf84Q9BUA3 381 aaPredicted RBP14.81□□□□□ -0.04
NEAT1-201ENST00000499732 SPATA16Q9BXB7 569 aa14.81□□□□□ -0.04
NEAT1-201ENST00000499732 VCX3AQ9NNX9 186 aa14.81□□□□□ -0.04
NEAT1-201ENST00000499732 EIF2B3Q9NR50 452 aaKnown RBP14.81□□□□□ -0.04
NEAT1-201ENST00000499732 TBC1D13Q9NVG8 400 aa14.81□□□□□ -0.04
NEAT1-201ENST00000499732 GPATCH2LQ9NWQ4 482 aa14.81□□□□□ -0.04
NEAT1-201ENST00000499732 NLRC5Q86WI3 1866 aa14.81□□□□□ -0.04
NEAT1-201ENST00000499732 HACD1B0YJ81 288 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 DLL1O00548 723 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 ITM2AO43736 263 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 ALDOAP04075 364 aaKnown RBP14.8□□□□□ -0.04
NEAT1-201ENST00000499732 ITGB1P05556 798 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 FAM200BP0CF97 657 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 ZCCHC18P0CG32 403 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 UQCRBP14927 111 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 PTPN9P43378 593 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 RPL10AP62906 217 aaKnown RBP14.8□□□□□ -0.04
NEAT1-201ENST00000499732 SLC25A3Q00325 362 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 ADIGQ0VDE8 80 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 GRM2Q14416 872 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 CA9Q16790 459 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 HEATR6Q6AI08 1181 aaKnown RBP14.8□□□□□ -0.04
NEAT1-201ENST00000499732 PACS1Q6VY07 963 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 SDCCAG8Q86SQ7 713 aaPredicted RBP14.8□□□□□ -0.04
NEAT1-201ENST00000499732 FAM35AQ86V20 835 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 SLC25A41Q8N5S1 370 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 HASPINQ8TF76 798 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 FAM193BQ96PV7 902 aaPredicted RBP14.8□□□□□ -0.04
NEAT1-201ENST00000499732 NAT9Q9BTE0 207 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 MED10Q9BTT4 135 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 KLHL4Q9C0H6 718 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 EBF3Q9H4W6 596 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 CDH22Q9UJ99 828 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 SF3B1O75533 1304 aaKnown RBP eCLIP14.8□□□□□ -0.04
NEAT1-201ENST00000499732 FNDC1Q4ZHG4 1894 aaPredicted RBP14.8□□□□□ -0.04
NEAT1-201ENST00000499732 ARHGEF37A1IGU5 675 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 F8W810 466 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 TPP1O14773 563 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 CASQ2O14958 399 aaPredicted RBP14.8□□□□□ -0.04
NEAT1-201ENST00000499732 RNASEH1O60930 286 aaKnown RBP14.8□□□□□ -0.04
NEAT1-201ENST00000499732 DDHD2O94830 711 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 TFE3P19532 575 aaPredicted RBP14.8□□□□□ -0.04
NEAT1-201ENST00000499732 ITGB8P26012 769 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 PCSK1P29120 753 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 GSTT1P30711 240 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 HDAC4P56524 1084 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 FPGSQ05932 587 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 MED21Q13503 144 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 CCNIQ14094 377 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 PDE1CQ14123 709 aaPredicted RBP14.8□□□□□ -0.04
NEAT1-201ENST00000499732 CNPY1Q3B7I2 92 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 PDPK2PQ6A1A2 396 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 COLGALT2Q8IYK4 626 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 TMEM199Q8N511 208 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 CENPIQ92674 756 aaPredicted RBP14.8□□□□□ -0.04
NEAT1-201ENST00000499732 VWCEQ96DN2 955 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 CASD1Q96PB1 797 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 MRPL9Q9BYD2 267 aaKnown RBP14.8□□□□□ -0.04
NEAT1-201ENST00000499732 TMEM30AQ9NV96 361 aa14.8□□□□□ -0.04
NEAT1-201ENST00000499732 ABHD14A-ACY1A0A1B0GW23 586 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms