RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 IPO4Q8TEX9 1081 aaKnown RBP4.15□□□□□ -1.75
SMC4-227ENST00000497984 C18orf8Q96DM3 657 aa4.15□□□□□ -1.75
SMC4-227ENST00000497984 GAREM1Q9H706 876 aa4.15□□□□□ -1.75
SMC4-227ENST00000497984 TMEM248Q9NWD8 314 aa4.15□□□□□ -1.75
SMC4-227ENST00000497984 DONSONQ9NYP3 566 aa4.15□□□□□ -1.75
SMC4-227ENST00000497984 AGO1Q9UL18 857 aaKnown RBP4.15□□□□□ -1.75
SMC4-227ENST00000497984 LZTS1Q9Y250 596 aa4.15□□□□□ -1.75
SMC4-227ENST00000497984 LINC01553A4QN01 128 aa4.14□□□□□ -1.75
SMC4-227ENST00000497984 PMM2O15305 246 aa4.14□□□□□ -1.75
SMC4-227ENST00000497984 TMCC1O94876 653 aa4.14□□□□□ -1.75
SMC4-227ENST00000497984 HOXB9P17482 250 aaPredicted RBP4.14□□□□□ -1.75
SMC4-227ENST00000497984 PRPH2P23942 346 aa4.14□□□□□ -1.75
SMC4-227ENST00000497984 AKT1P31749 480 aa4.14□□□□□ -1.75
SMC4-227ENST00000497984 RNASELQ05823 741 aaKnown RBP4.14□□□□□ -1.75
SMC4-227ENST00000497984 SF3A3Q12874 501 aaKnown RBP eCLIP4.14□□□□□ -1.754e-10■■■■■ 210.9
SMC4-227ENST00000497984 RBM39Q14498 530 aaKnown RBP4.14□□□□□ -1.75
SMC4-227ENST00000497984 C5orf22Q49AR2 442 aa4.14□□□□□ -1.75
SMC4-227ENST00000497984 ZNF569Q5MCW4 686 aa4.14□□□□□ -1.75
SMC4-227ENST00000497984 HIST2H2BCQ6DN03 193 aa4.14□□□□□ -1.75
SMC4-227ENST00000497984 KIAA1324Q6UXG2 1013 aaKnown RBP4.14□□□□□ -1.75
SMC4-227ENST00000497984 DPP9Q86TI2 863 aa4.14□□□□□ -1.75
SMC4-227ENST00000497984 NRSN1Q8IZ57 195 aa4.14□□□□□ -1.75
SMC4-227ENST00000497984 CCDC136Q96JN2 1154 aa4.14□□□□□ -1.75
SMC4-227ENST00000497984 SLC25A33Q9BSK2 321 aa4.14□□□□□ -1.75
SMC4-227ENST00000497984 HDHD5Q9BXW7 423 aa4.14□□□□□ -1.75
SMC4-227ENST00000497984 SRPRBQ9Y5M8 271 aaKnown RBP4.14□□□□□ -1.75
SMC4-227ENST00000497984 ANO9A1A5B4 782 aa4.13□□□□□ -1.75
SMC4-227ENST00000497984 FAM90A18PA6NE21 464 aa4.13□□□□□ -1.75
SMC4-227ENST00000497984 FAM90A16PA6NEW6 464 aa4.13□□□□□ -1.75
SMC4-227ENST00000497984 FAM90A9PA6NNJ1 464 aa4.13□□□□□ -1.75
SMC4-227ENST00000497984 FAM90A5PA8MXJ8 464 aa4.13□□□□□ -1.75
SMC4-227ENST00000497984 HSPB6O14558 160 aa4.13□□□□□ -1.75
SMC4-227ENST00000497984 APAF1O14727 1248 aa4.13□□□□□ -1.75
SMC4-227ENST00000497984 PIP5K1BO14986 540 aa4.13□□□□□ -1.75
SMC4-227ENST00000497984 CLDN7O95471 211 aa4.13□□□□□ -1.75
SMC4-227ENST00000497984 FAM90A15PP0C7V4 464 aa4.13□□□□□ -1.75
SMC4-227ENST00000497984 FAM90A14PP0C7W9 464 aa4.13□□□□□ -1.75
SMC4-227ENST00000497984 DAOP14920 347 aa4.13□□□□□ -1.75
SMC4-227ENST00000497984 TYK2P29597 1187 aa4.13□□□□□ -1.75
SMC4-227ENST00000497984 HSPA7P48741 367 aa4.13□□□□□ -1.75
SMC4-227ENST00000497984 CDH12P55289 794 aa4.13□□□□□ -1.75
SMC4-227ENST00000497984 SAFBQ15424 915 aaKnown RBP eCLIP4.13□□□□□ -1.75
SMC4-227ENST00000497984 COBLL1Q53SF7 1204 aa4.13□□□□□ -1.75
SMC4-227ENST00000497984 ZNF449Q6P9G9 518 aa4.13□□□□□ -1.75
SMC4-227ENST00000497984 MIGA1Q8NAN2 632 aa4.13□□□□□ -1.75
SMC4-227ENST00000497984 TP63Q9H3D4 680 aaPredicted RBP4.13□□□□□ -1.75
SMC4-227ENST00000497984 SLC22A11Q9NSA0 550 aa4.13□□□□□ -1.75
SMC4-227ENST00000497984 A0A0A0MQY5 61 aa4.12□□□□□ -1.75
SMC4-227ENST00000497984 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.12□□□□□ -1.75
SMC4-227ENST00000497984 AGAP5A6NIR3 686 aa4.12□□□□□ -1.75
SMC4-227ENST00000497984 DNPH1O43598 174 aa4.12□□□□□ -1.75
SMC4-227ENST00000497984 PLA2G6O60733 806 aa4.12□□□□□ -1.75
SMC4-227ENST00000497984 LARGE1O95461 756 aa4.12□□□□□ -1.75
SMC4-227ENST00000497984 PRKCHP24723 683 aa4.12□□□□□ -1.75
SMC4-227ENST00000497984 TM4SF4P48230 202 aa4.12□□□□□ -1.75
SMC4-227ENST00000497984 RCAN1P53805 252 aa4.12□□□□□ -1.75
SMC4-227ENST00000497984 TRIM60Q495X7 471 aa4.12□□□□□ -1.75
SMC4-227ENST00000497984 SYTL3Q4VX76 610 aa4.12□□□□□ -1.75
SMC4-227ENST00000497984 HSP90AB2PQ58FF8 381 aa4.12□□□□□ -1.75
SMC4-227ENST00000497984 DSTYKQ6XUX3 929 aa4.12□□□□□ -1.75
SMC4-227ENST00000497984 MON1BQ7L1V2 547 aa4.12□□□□□ -1.75
SMC4-227ENST00000497984 SMIM29Q86T20 159 aa4.12□□□□□ -1.75
SMC4-227ENST00000497984 TRIM74Q86UV6 250 aa4.12□□□□□ -1.75
SMC4-227ENST00000497984 TRIM73Q86UV7 250 aa4.12□□□□□ -1.75
SMC4-227ENST00000497984 ZDHHC23Q8IYP9 409 aa4.12□□□□□ -1.75
SMC4-227ENST00000497984 TEX45Q8NA69 505 aa4.12□□□□□ -1.75
SMC4-227ENST00000497984 RIPOR3Q96MK2 946 aa4.12□□□□□ -1.75
SMC4-227ENST00000497984 FRG2BQ96QU4 278 aa4.12□□□□□ -1.75
SMC4-227ENST00000497984 GFM1Q96RP9 751 aaKnown RBP4.12□□□□□ -1.75
SMC4-227ENST00000497984 STK33Q9BYT3 514 aa4.12□□□□□ -1.75
SMC4-227ENST00000497984 CDH22Q9UJ99 828 aa4.12□□□□□ -1.75
SMC4-227ENST00000497984 CNTN6Q9UQ52 1028 aa4.12□□□□□ -1.75
SMC4-227ENST00000497984 MST1RQ04912 1400 aa4.12□□□□□ -1.75
SMC4-227ENST00000497984 RASA4BC9J798 803 aa4.11□□□□□ -1.75
SMC4-227ENST00000497984 RASA4O43374 803 aa4.11□□□□□ -1.75
SMC4-227ENST00000497984 HLA-DQA2P01906 255 aa4.11□□□□□ -1.75
SMC4-227ENST00000497984 ENO3P13929 434 aaPredicted RBP4.11□□□□□ -1.75
SMC4-227ENST00000497984 GNALP38405 381 aa4.11□□□□□ -1.75
SMC4-227ENST00000497984 MYBPC2Q14324 1141 aa4.11□□□□□ -1.75
SMC4-227ENST00000497984 SF3B4Q15427 424 aaKnown RBP eCLIP4.11□□□□□ -1.753e-8■■■■□ 26.1
SMC4-227ENST00000497984 EFHC1Q5JVL4 640 aa4.11□□□□□ -1.75
SMC4-227ENST00000497984 IZUMO3Q5VZ72 239 aa4.11□□□□□ -1.75
SMC4-227ENST00000497984 MTFR2Q6P444 385 aa4.11□□□□□ -1.75
SMC4-227ENST00000497984 OR2C3Q8N628 320 aa4.11□□□□□ -1.75
SMC4-227ENST00000497984 PJA1Q8NG27 643 aa4.11□□□□□ -1.75
SMC4-227ENST00000497984 HDAC7Q8WUI4 952 aa4.11□□□□□ -1.75
SMC4-227ENST00000497984 ADGRG7Q96K78 797 aa4.11□□□□□ -1.75
SMC4-227ENST00000497984 PRPF18Q99633 342 aaKnown RBP4.11□□□□□ -1.75
SMC4-227ENST00000497984 SEL1LQ9UBV2 794 aa4.11□□□□□ -1.75
SMC4-227ENST00000497984 SLC39A10Q9ULF5 831 aa4.11□□□□□ -1.75
SMC4-227ENST00000497984 CEP83Q9Y592 693 aa4.11□□□□□ -1.75
SMC4-227ENST00000497984 C17orf102A2RUQ5 167 aa4.1□□□□□ -1.75
SMC4-227ENST00000497984 CAND2O75155 1236 aa4.1□□□□□ -1.75
SMC4-227ENST00000497984 SERPINI2O75830 405 aa4.1□□□□□ -1.75
SMC4-227ENST00000497984 HEXIM1O94992 359 aaKnown RBP4.1□□□□□ -1.75
SMC4-227ENST00000497984 C21orf33P30042 268 aaPredicted RBP4.1□□□□□ -1.75
SMC4-227ENST00000497984 OAZ1P54368 228 aa4.1□□□□□ -1.75
SMC4-227ENST00000497984 CTTNQ14247 550 aaKnown RBP4.1□□□□□ -1.75
SMC4-227ENST00000497984 BTBD16Q32M84 506 aa4.1□□□□□ -1.75
SMC4-227ENST00000497984 ZACNQ401N2 412 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms