RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 FAM69AQ5T7M9 428 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 DCAF12L1Q5VU92 463 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 LRCH2Q5VUJ6 765 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 RAB12Q6IQ22 244 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 MTFR2Q6P444 385 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 SHQ1Q6PI26 577 aaKnown RBP3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 SLC2A7Q6PXP3 512 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 ABRAXAS1Q6UWZ7 409 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 ATF7IPQ6VMQ6 1270 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 ZNF804AQ7Z570 1209 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 GPR149Q86SP6 731 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 SLC9B2Q86UD5 537 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 ARHGEF25Q86VW2 580 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 CFAP52Q8N1V2 620 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 C17orf53Q8N3J3 647 aaPredicted RBP3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 LRRC71Q8N4P6 559 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 GDAP1Q8TB36 358 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 TBC1D5Q92609 795 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 RBM18Q96H35 190 aaKnown RBP3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 APOPT1Q96IL0 206 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 PHACTR3Q96KR7 559 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 HGH1Q9BTY7 390 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 ZNF518BQ9C0D4 1074 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 SLC25A18Q9H1K4 315 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 RABEP2Q9H5N1 569 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 NOD2Q9HC29 1040 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 AKIP1Q9NQ31 210 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 TRPM5Q9NZQ8 1165 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 CFAP97Q9P2B7 532 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 MID2Q9UJV3 735 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 DERAQ9Y315 318 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 RIMS2Q9UQ26 1411 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 COL1A1P02452 1464 aaPredicted RBP3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 PCNX1Q96RV3 2341 aa3.92□□□□□ -1.78
EXOSC3-208ENST00000496910 A0A087WWL8 130 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 GAGE12BA1L429 117 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 GAGE12HA6NDE8 117 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 MBD3L4A6NDZ8 208 aaPredicted RBP3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 MBD3L3A6NE82 208 aaPredicted RBP3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 PROB1E7EW31 1015 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 LOC400499M0QZD8 3231 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 PLOD2O00469 737 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 MATN3O15232 486 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 PEX11BO96011 259 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 AFPP02771 609 aaKnown RBP3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 SRGAP2BP0DMP2 458 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 PIM1P11309 404 aaPredicted RBP3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 KLRC1P26715 233 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 CIITAP33076 1130 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 THPOP40225 353 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 GARSP41250 739 aaKnown RBP3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 HARS2P49590 506 aaKnown RBP3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 ZNF41P51814 821 aaPredicted RBP3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 EVCP57679 992 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 POLR2FP61218 127 aaKnown RBP3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 HSD11B2P80365 405 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 AIMP1Q12904 312 aaKnown RBP3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 MPP3Q13368 585 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 FOXE3Q13461 319 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 DCTN2Q13561 401 aaKnown RBP3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 COG2Q14746 738 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 ANKRD1Q15327 319 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 SEC23BQ15437 767 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 CYP2A13Q16696 494 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 SOWAHCQ53LP3 525 aaPredicted RBP3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 TTC22Q5TAA0 569 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 CDC42BPAQ5VT25 1732 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 TAF2Q6P1X5 1199 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 KLHL24Q6TFL4 600 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 IKBIPQ70UQ0 350 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 SYT13Q7L8C5 426 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 PIWIL3Q7Z3Z3 882 aaKnown RBP3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 GLRX5Q86SX6 157 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 MAPKAPK5Q8IW41 473 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 CCDC28AQ8IWP9 274 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 TAGAPQ8N103 731 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 TMEM132CQ8N3T6 1108 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 ZNF276Q8N554 614 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 POC1BQ8TC44 478 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 METTL6Q8TCB7 284 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 UTP15Q8TED0 518 aaKnown RBP3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 NCSTNQ92542 709 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 PTP4A1Q93096 173 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 LENG9Q96B70 501 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 SLX1AQ9BQ83 275 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 FUZQ9BT04 418 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 PHF7Q9BWX1 381 aaPredicted RBP3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 FTOQ9C0B1 505 aaKnown RBP eCLIP3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 ANKRD2Q9GZV1 360 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 VPS16Q9H269 839 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 PDCL3Q9H2J4 239 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 MUC13Q9H3R2 512 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 CHMP4BQ9H444 224 aaKnown RBP3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 ERVMER34-1Q9H9K5 563 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 SLAMF7Q9NQ25 335 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 RXFP3Q9NSD7 469 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 TMEM74BQ9NUR3 256 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 HPF1Q9NWY4 346 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 KCNE5Q9UJ90 142 aa3.91□□□□□ -1.78
EXOSC3-208ENST00000496910 COG5Q9UP83 839 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms