RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 FAF2Q96CS3 445 aa20.47■□□□□ 0.87
LMO4-204ENST00000495705 ERLEC1Q96DZ1 483 aa20.47■□□□□ 0.87
LMO4-204ENST00000495705 CCDC114Q96M63 670 aa20.47■□□□□ 0.87
LMO4-204ENST00000495705 CEP44Q9C0F1 390 aa20.47■□□□□ 0.87
LMO4-204ENST00000495705 MKRN2Q9H000 416 aaKnown RBP20.47■□□□□ 0.87
LMO4-204ENST00000495705 SEMA4AQ9H3S1 761 aa20.47■□□□□ 0.87
LMO4-204ENST00000495705 GOLPH3Q9H4A6 298 aa20.47■□□□□ 0.87
LMO4-204ENST00000495705 PRDM16Q9HAZ2 1276 aa20.47■□□□□ 0.87
LMO4-204ENST00000495705 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.47■□□□□ 0.87
LMO4-204ENST00000495705 MACROD2A1Z1Q3 448 aa20.46■□□□□ 0.87
LMO4-204ENST00000495705 RNASEH1O60930 286 aaKnown RBP20.46■□□□□ 0.87
LMO4-204ENST00000495705 ZNF217O75362 1048 aa20.46■□□□□ 0.87
LMO4-204ENST00000495705 PTMAP06454 111 aaKnown RBP20.46■□□□□ 0.87
LMO4-204ENST00000495705 C7P10643 843 aa20.46■□□□□ 0.87
LMO4-204ENST00000495705 ZBTB16Q05516 673 aa20.46■□□□□ 0.87
LMO4-204ENST00000495705 MMRN1Q13201 1228 aa20.46■□□□□ 0.87
LMO4-204ENST00000495705 ELAVL3Q14576 367 aaKnown RBP20.46■□□□□ 0.87
LMO4-204ENST00000495705 ANKRD20A8PQ5CZ79 823 aa20.46■□□□□ 0.87
LMO4-204ENST00000495705 C9orf64Q5T6V5 341 aa20.46■□□□□ 0.87
LMO4-204ENST00000495705 C22orf39Q6P5X5 142 aa20.46■□□□□ 0.87
LMO4-204ENST00000495705 KIAA1324Q6UXG2 1013 aaKnown RBP20.46■□□□□ 0.87
LMO4-204ENST00000495705 C11orf74Q86VG3 221 aa20.46■□□□□ 0.87
LMO4-204ENST00000495705 TMPRSS6Q8IU80 811 aa20.46■□□□□ 0.87
LMO4-204ENST00000495705 RNF10Q8N5U6 811 aaKnown RBP20.46■□□□□ 0.87
LMO4-204ENST00000495705 NPWQ8N729 165 aa20.46■□□□□ 0.87
LMO4-204ENST00000495705 KIAA1524Q8TCG1 905 aa20.46■□□□□ 0.87
LMO4-204ENST00000495705 GAB3Q8WWW8 586 aa20.46■□□□□ 0.87
LMO4-204ENST00000495705 CASKIN2Q8WXE0 1202 aa20.46■□□□□ 0.87
LMO4-204ENST00000495705 RAPGEF5Q92565 580 aa20.46■□□□□ 0.87
LMO4-204ENST00000495705 SIPA1Q96FS4 1042 aa20.46■□□□□ 0.87
LMO4-204ENST00000495705 CELF6Q96J87 481 aaKnown RBP20.46■□□□□ 0.87
LMO4-204ENST00000495705 SPACA7Q96KW9 195 aa20.46■□□□□ 0.87
LMO4-204ENST00000495705 MTG2Q9H4K7 406 aa20.46■□□□□ 0.87
LMO4-204ENST00000495705 ETNK2Q9NVF9 386 aa20.46■□□□□ 0.87
LMO4-204ENST00000495705 FAM86C1Q9NVL1 165 aa20.46■□□□□ 0.87
LMO4-204ENST00000495705 SPAG17Q6Q759 2223 aa20.45■□□□□ 0.86
LMO4-204ENST00000495705 ALOX15BO15296 676 aa20.45■□□□□ 0.86
LMO4-204ENST00000495705 RPP40O75818 363 aaKnown RBP20.45■□□□□ 0.86
LMO4-204ENST00000495705 TNNT1P13805 278 aa20.45■□□□□ 0.86
LMO4-204ENST00000495705 ZNF776Q68DI1 518 aaPredicted RBP20.45■□□□□ 0.86
LMO4-204ENST00000495705 DSG4Q86SJ6 1040 aa20.45■□□□□ 0.86
LMO4-204ENST00000495705 ARHGAP12Q8IWW6 846 aa20.45■□□□□ 0.86
LMO4-204ENST00000495705 SYCE1Q8N0S2 351 aa20.45■□□□□ 0.86
LMO4-204ENST00000495705 PCDH20Q8N6Y1 951 aaKnown RBP20.45■□□□□ 0.86
LMO4-204ENST00000495705 PCDH19Q8TAB3 1148 aa20.45■□□□□ 0.86
LMO4-204ENST00000495705 SLC39A8Q9C0K1 460 aa20.45■□□□□ 0.86
LMO4-204ENST00000495705 RSPH9Q9H1X1 276 aaPredicted RBP20.45■□□□□ 0.86
LMO4-204ENST00000495705 TRIM10Q9UDY6 481 aa20.45■□□□□ 0.86
LMO4-204ENST00000495705 FARP1Q9Y4F1 1045 aaPredicted RBP20.45■□□□□ 0.86
LMO4-204ENST00000495705 K7ERQ8 282 aa20.44■□□□□ 0.86
LMO4-204ENST00000495705 DFFAO00273 331 aa20.44■□□□□ 0.86
LMO4-204ENST00000495705 SMAD6O43541 496 aaKnown RBP20.44■□□□□ 0.86
LMO4-204ENST00000495705 ACADMP11310 421 aa20.44■□□□□ 0.86
LMO4-204ENST00000495705 P2RY2P41231 377 aa20.44■□□□□ 0.86
LMO4-204ENST00000495705 PAPOLAP51003 745 aaKnown RBP20.44■□□□□ 0.86
LMO4-204ENST00000495705 INO80DQ53TQ3 878 aaPredicted RBP20.44■□□□□ 0.86
LMO4-204ENST00000495705 ZNF662Q6ZS27 426 aa20.44■□□□□ 0.86
LMO4-204ENST00000495705 Q6ZVU0 165 aa20.44■□□□□ 0.86
LMO4-204ENST00000495705 LRRC57Q8N9N7 239 aa20.44■□□□□ 0.86
LMO4-204ENST00000495705 OR8D1Q8WZ84 308 aa20.44■□□□□ 0.86
LMO4-204ENST00000495705 ISG20Q96AZ6 181 aaKnown RBP20.44■□□□□ 0.86
LMO4-204ENST00000495705 SLC6A17Q9H1V8 727 aa20.44■□□□□ 0.86
LMO4-204ENST00000495705 EPC1Q9H2F5 836 aa20.44■□□□□ 0.86
LMO4-204ENST00000495705 SCML1Q9UN30 329 aa20.44■□□□□ 0.86
LMO4-204ENST00000495705 A0A0U1RQJ8 604 aa20.43■□□□□ 0.86
LMO4-204ENST00000495705 GRID2IPA4D2P6 1211 aa20.43■□□□□ 0.86
LMO4-204ENST00000495705 HRO43593 1189 aa20.43■□□□□ 0.86
LMO4-204ENST00000495705 PRAMEF11O60813 436 aa20.43■□□□□ 0.86
LMO4-204ENST00000495705 CD160O95971 181 aa20.43■□□□□ 0.86
LMO4-204ENST00000495705 DNTTP04053 509 aa20.43■□□□□ 0.86
LMO4-204ENST00000495705 VAV1P15498 845 aa20.43■□□□□ 0.86
LMO4-204ENST00000495705 CTNNA1P35221 906 aaKnown RBP20.43■□□□□ 0.86
LMO4-204ENST00000495705 RECQLP46063 649 aaPredicted RBP20.43■□□□□ 0.86
LMO4-204ENST00000495705 RPS14P62263 151 aaKnown RBP20.43■□□□□ 0.86
LMO4-204ENST00000495705 SFSWAPQ12872 951 aaKnown RBP20.43■□□□□ 0.86
LMO4-204ENST00000495705 PAFAH1B3Q15102 231 aaKnown RBP20.43■□□□□ 0.86
LMO4-204ENST00000495705 TTC31Q49AM3 519 aaPredicted RBP20.43■□□□□ 0.86
LMO4-204ENST00000495705 NCBP2-AS2Q69YL0 99 aa20.43■□□□□ 0.86
LMO4-204ENST00000495705 CEP68Q76N32 757 aa20.43■□□□□ 0.86
LMO4-204ENST00000495705 KATNAL2Q8IYT4 538 aa20.43■□□□□ 0.86
LMO4-204ENST00000495705 STK40Q8N2I9 435 aa20.43■□□□□ 0.86
LMO4-204ENST00000495705 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.43■□□□□ 0.86
LMO4-204ENST00000495705 RBM41Q96IZ5 413 aaKnown RBP20.43■□□□□ 0.86
LMO4-204ENST00000495705 RNF157Q96PX1 679 aa20.43■□□□□ 0.86
LMO4-204ENST00000495705 SP110Q9HB58 689 aa20.43■□□□□ 0.86
LMO4-204ENST00000495705 PDFQ9HBH1 243 aa20.43■□□□□ 0.86
LMO4-204ENST00000495705 UBA2Q9UBT2 640 aaPredicted RBP20.43■□□□□ 0.86
LMO4-204ENST00000495705 FCF1Q9Y324 198 aaKnown RBP20.43■□□□□ 0.86
LMO4-204ENST00000495705 MFHAS1Q9Y4C4 1052 aa20.43■□□□□ 0.86
LMO4-204ENST00000495705 CCDC66A2RUB6 948 aa20.42■□□□□ 0.86
LMO4-204ENST00000495705 C3orf70A6NLC5 250 aaPredicted RBP20.42■□□□□ 0.86
LMO4-204ENST00000495705 PROB1E7EW31 1015 aa20.42■□□□□ 0.86
LMO4-204ENST00000495705 MCF2LO15068 1137 aa20.42■□□□□ 0.86
LMO4-204ENST00000495705 ADH1BP00325 375 aa20.42■□□□□ 0.86
LMO4-204ENST00000495705 CTNNA2P26232 953 aa20.42■□□□□ 0.86
LMO4-204ENST00000495705 IL10RBQ08334 325 aa20.42■□□□□ 0.86
LMO4-204ENST00000495705 SIM2Q14190 667 aaPredicted RBP20.42■□□□□ 0.86
LMO4-204ENST00000495705 MAP7D1Q3KQU3 841 aa20.42■□□□□ 0.86
LMO4-204ENST00000495705 CACUL1Q86Y37 369 aa20.42■□□□□ 0.86
LMO4-204ENST00000495705 LRRC49Q8IUZ0 686 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms