RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 OR4Q2P0C623 313 aa16.62■□□□□ 0.25
CBX4-204ENST00000495122 KRT15P19012 456 aa16.62■□□□□ 0.25
CBX4-204ENST00000495122 CCNCP24863 283 aa16.62■□□□□ 0.25
CBX4-204ENST00000495122 CNTFP26441 200 aa16.62■□□□□ 0.25
CBX4-204ENST00000495122 SSTR1P30872 391 aa16.62■□□□□ 0.25
CBX4-204ENST00000495122 HOXA9P31269 272 aa16.62■□□□□ 0.25
CBX4-204ENST00000495122 NUBP1P53384 320 aa16.62■□□□□ 0.25
CBX4-204ENST00000495122 HNRNPH2P55795 449 aaKnown RBP16.62■□□□□ 0.25
CBX4-204ENST00000495122 GAD2Q05329 585 aa16.62■□□□□ 0.25
CBX4-204ENST00000495122 RING1Q06587 406 aa16.62■□□□□ 0.25
CBX4-204ENST00000495122 RAB33AQ14088 237 aa16.62■□□□□ 0.25
CBX4-204ENST00000495122 CWF19L1Q69YN2 538 aaKnown RBP16.62■□□□□ 0.25
CBX4-204ENST00000495122 TTC19Q6DKK2 380 aaPredicted RBP16.62■□□□□ 0.25
CBX4-204ENST00000495122 GET4Q7L5D6 327 aaPredicted RBP16.62■□□□□ 0.25
CBX4-204ENST00000495122 KLHDC8BQ8IXV7 354 aa16.62■□□□□ 0.25
CBX4-204ENST00000495122 ATP6V0D2Q8N8Y2 350 aa16.62■□□□□ 0.25
CBX4-204ENST00000495122 PDZD8Q8NEN9 1154 aa16.62■□□□□ 0.25
CBX4-204ENST00000495122 GSDMBQ8TAX9 411 aa16.62■□□□□ 0.25
CBX4-204ENST00000495122 SIGLEC10Q96LC7 697 aa16.62■□□□□ 0.25
CBX4-204ENST00000495122 TTLL2Q9BWV7 592 aa16.62■□□□□ 0.25
CBX4-204ENST00000495122 TRABDQ9H4I3 376 aa16.62■□□□□ 0.25
CBX4-204ENST00000495122 PPANQ9NQ55 473 aaKnown RBP16.62■□□□□ 0.25
CBX4-204ENST00000495122 ANLNQ9NQW6 1124 aa16.62■□□□□ 0.25
CBX4-204ENST00000495122 PPARGC1AQ9UBK2 798 aaKnown RBP16.62■□□□□ 0.25
CBX4-204ENST00000495122 CTNNAL1Q9UBT7 734 aa16.62■□□□□ 0.25
CBX4-204ENST00000495122 COL4A3Q01955 1670 aa16.62■□□□□ 0.25
CBX4-204ENST00000495122 TCRBV9S1A1TA0A576 114 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 SDR42E2A6NKP2 422 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 NARSO43776 548 aaKnown RBP16.61■□□□□ 0.25
CBX4-204ENST00000495122 PAGE1O75459 146 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 ZWINTO95229 277 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 INHBAP08476 426 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 POU2F2P09086 479 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 PTPN3P26045 913 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 TUFMP49411 452 aaKnown RBP16.61■□□□□ 0.25
CBX4-204ENST00000495122 SERPINB9P50453 376 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 NRLP54845 237 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 IL9RQ01113 521 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 TRIP4Q15650 581 aaPredicted RBP16.61■□□□□ 0.25
CBX4-204ENST00000495122 PPM1LQ5SGD2 360 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 SLC8B1Q6J4K2 584 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 TIGD7Q6NT04 549 aaPredicted RBP16.61■□□□□ 0.25
CBX4-204ENST00000495122 RSPO2Q6UXX9 243 aaPredicted RBP16.61■□□□□ 0.25
CBX4-204ENST00000495122 ZNF534Q76KX8 674 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 SLC26A11Q86WA9 606 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 SRRM1Q8IYB3 904 aaKnown RBP16.61■□□□□ 0.25
CBX4-204ENST00000495122 CYP4X1Q8N118 509 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 ZNF567Q8N184 647 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 DCAKDQ8WVC6 231 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 DYDC1Q8WWB3 177 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 FBXO32Q969P5 355 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 MTBPQ96DY7 904 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 ZNF317Q96PQ6 595 aaPredicted RBP16.61■□□□□ 0.25
CBX4-204ENST00000495122 GBA3Q9H227 469 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 KCNK9Q9NPC2 374 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 TMPRSS4Q9NRS4 437 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 KLHL8Q9P2G9 620 aaPredicted RBP16.61■□□□□ 0.25
CBX4-204ENST00000495122 MAFFQ9ULX9 164 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 NEU3Q9UQ49 428 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 MFHAS1Q9Y4C4 1052 aa16.61■□□□□ 0.25
CBX4-204ENST00000495122 MYO15AQ9UKN7 3530 aa16.6■□□□□ 0.25
CBX4-204ENST00000495122 TM9SF1O15321 606 aa16.6■□□□□ 0.25
CBX4-204ENST00000495122 GALR2O43603 387 aaPredicted RBP16.6■□□□□ 0.25
CBX4-204ENST00000495122 MAP3K6O95382 1288 aa16.6■□□□□ 0.25
CBX4-204ENST00000495122 AP2A1O95782 977 aa16.6■□□□□ 0.25
CBX4-204ENST00000495122 ZDHHC11BP0C7U3 371 aa16.6■□□□□ 0.25
CBX4-204ENST00000495122 OR1D2P34982 312 aa16.6■□□□□ 0.25
CBX4-204ENST00000495122 IFNAR2P48551 515 aa16.6■□□□□ 0.25
CBX4-204ENST00000495122 MLLT6P55198 1093 aaPredicted RBP16.6■□□□□ 0.25
CBX4-204ENST00000495122 TBX4P57082 545 aa16.6■□□□□ 0.25
CBX4-204ENST00000495122 DNAJC3Q13217 504 aa16.6■□□□□ 0.25
CBX4-204ENST00000495122 PRPSAP1Q14558 356 aa16.6■□□□□ 0.25
CBX4-204ENST00000495122 TEX44Q53QW1 395 aa16.6■□□□□ 0.25
CBX4-204ENST00000495122 GKAP1Q5VSY0 366 aaPredicted RBP16.6■□□□□ 0.25
CBX4-204ENST00000495122 ASTLQ6HA08 431 aaPredicted RBP16.6■□□□□ 0.25
CBX4-204ENST00000495122 GRASPQ7Z6J2 395 aaPredicted RBP16.6■□□□□ 0.25
CBX4-204ENST00000495122 YTHDF3Q7Z739 585 aaKnown RBP16.6■□□□□ 0.25
CBX4-204ENST00000495122 LRRC6Q86X45 466 aa16.6■□□□□ 0.25
CBX4-204ENST00000495122 MDM1Q8TC05 714 aa16.6■□□□□ 0.25
CBX4-204ENST00000495122 CKAP2Q8WWK9 683 aa16.6■□□□□ 0.25
CBX4-204ENST00000495122 NXPE3Q969Y0 559 aa16.6■□□□□ 0.25
CBX4-204ENST00000495122 TTC17Q96AE7 1141 aa16.6■□□□□ 0.25
CBX4-204ENST00000495122 STAMBPL1Q96FJ0 436 aa16.6■□□□□ 0.25
CBX4-204ENST00000495122 MAGEB18Q96M61 343 aa16.6■□□□□ 0.25
CBX4-204ENST00000495122 MFSD1Q9H3U5 465 aa16.6■□□□□ 0.25
CBX4-204ENST00000495122 NMUR1Q9HB89 426 aa16.6■□□□□ 0.25
CBX4-204ENST00000495122 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.6■□□□□ 0.254e-6■■□□□ 13.4
CBX4-204ENST00000495122 TBK1Q9UHD2 729 aa16.6■□□□□ 0.25
CBX4-204ENST00000495122 TTLL3Q9Y4R7 772 aa16.6■□□□□ 0.25
CBX4-204ENST00000495122 CDY1Q9Y6F8 540 aa16.6■□□□□ 0.25
CBX4-204ENST00000495122 MAGEB16A2A368 324 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 ANHXE9PGG2 379 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 CCL16O15467 120 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 BANF1O75531 89 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 KRT37O76014 449 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 ALDH1A2O94788 518 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 LAMP2P13473 410 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 RHOQP17081 205 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 PGAM1P18669 254 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 DRD4P21917 467 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms