RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 MGAT5BQ3V5L5 792 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 TAPT1Q6NXT6 567 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 SPATA2LQ8IUW3 424 aaPredicted RBP13.68□□□□□ -0.22
GPC1-209ENST00000495100 PSTKQ8IV42 348 aaKnown RBP13.68□□□□□ -0.22
GPC1-209ENST00000495100 UBR7Q8N806 425 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 OR9I1Q8NGQ6 314 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 ATP6V1E2Q96A05 226 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 MYLPFQ96A32 169 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 SKA1Q96BD8 255 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 COLEC11Q9BWP8 271 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 GRIP2Q9C0E4 1043 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 ABHD16BQ9H3Z7 469 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 GPAMQ9HCL2 828 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 PFDN4Q9NQP4 134 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 ACOT9Q9Y305 439 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 COL11A2P13942 1736 aaPredicted RBP13.68□□□□□ -0.22
GPC1-209ENST00000495100 C17orf102A2RUQ5 167 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 SAC3D1A6NKF1 404 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 OR6B1O95007 311 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 COX4I1P13073 169 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 CPB1P15086 417 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 YWHAHQ04917 246 aaPredicted RBP13.68□□□□□ -0.22
GPC1-209ENST00000495100 DLG1Q12959 904 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 COL9A2Q14055 689 aaPredicted RBP13.68□□□□□ -0.22
GPC1-209ENST00000495100 DCAF4L1Q3SXM0 396 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 KRT80Q6KB66 452 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 TMEM110Q86TL2 294 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 SNX27Q96L92 541 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 AFF4Q9UHB7 1163 aaKnown RBP13.68□□□□□ -0.22
GPC1-209ENST00000495100 BTRCQ9Y297 605 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 DTNAQ9Y4J8 743 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 CDY2AQ9Y6F7 541 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 SIPA1L1O43166 1804 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 AKAP10O43572 662 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 KLHL2O95198 593 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 LINGO3P0C6S8 592 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 STMN1P16949 149 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 CDH5P33151 784 aaPredicted RBP13.67□□□□□ -0.22
GPC1-209ENST00000495100 PTPN7P35236 360 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 SKIV2L2P42285 1042 aaKnown RBP13.67□□□□□ -0.22
GPC1-209ENST00000495100 SERPINB8P50452 374 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 CYP4V2Q6ZWL3 525 aaPredicted RBP13.67□□□□□ -0.22
GPC1-209ENST00000495100 SLC26A9Q7LBE3 791 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 ATAD1Q8NBU5 361 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 PPTC7Q8NI37 304 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 ZNF333Q96JL9 665 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 RPRD1AQ96P16 312 aaPredicted RBP13.67□□□□□ -0.22
GPC1-209ENST00000495100 SLC4A5Q9BY07 1137 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 POMKQ9H5K3 350 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 MTF2Q9Y483 593 aaPredicted RBP13.67□□□□□ -0.22
GPC1-209ENST00000495100 KCTD3Q9Y597 815 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.67□□□□□ -0.22
GPC1-209ENST00000495100 CCDC166P0CW27 439 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 EDNRBP24530 442 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 CRHR1P34998 444 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 CD86P42081 329 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 ACADSBP45954 432 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 GPR15P49685 360 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 PCLAFQ15004 111 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 SLC39A12Q504Y0 691 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 FAM35AQ86V20 835 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 ST13P4Q8IZP2 240 aaPredicted RBP13.67□□□□□ -0.22
GPC1-209ENST00000495100 MAML3Q96JK9 1138 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 DUSP16Q9BY84 665 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 PPCSQ9HAB8 311 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 NDFIP2Q9NV92 336 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 MTMR10Q9NXD2 777 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 SMPD4Q9NXE4 827 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 CDYLQ9Y232 598 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 CDY1Q9Y6F8 540 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 RNF103-CHMP3A0A140T963 221 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 FAM95CA0A1B0GW59 222 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 MOXD2PA6NHM9 499 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 E7ESA3 106 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 SUPT3HO75486 399 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 PARNO95453 639 aaKnown RBP13.67□□□□□ -0.22
GPC1-209ENST00000495100 PROZP22891 400 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 GIPC2Q8TF65 315 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 KBTBD7Q8WVZ9 684 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 QKIQ96PU8 341 aaKnown RBP eCLIP13.67□□□□□ -0.22
GPC1-209ENST00000495100 PRDM5Q9NQX1 630 aaPredicted RBP13.67□□□□□ -0.22
GPC1-209ENST00000495100 MIOSQ9NXC5 875 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 PTGDR2Q9Y5Y4 395 aa13.67□□□□□ -0.22
GPC1-209ENST00000495100 IGKV6-21A0A0C4DH24 114 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 ZBTB14O43829 449 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 ATXN8OSP0DMR3 200 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 PSEN2P49810 448 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 SLC18A2Q05940 514 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 CCDC15Q0P6D6 951 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 WASHC5Q12768 1159 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 CYLC2Q14093 348 aaPredicted RBP13.66□□□□□ -0.22
GPC1-209ENST00000495100 C6orf52Q5T4I8 152 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 ITPRIPL1Q6GPH6 555 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 TAC4Q86UU9 113 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 TRIML2Q8N7C3 387 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 BRI3BPQ8WY22 251 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 PTCD3Q96EY7 689 aaKnown RBP13.66□□□□□ -0.22
GPC1-209ENST00000495100 CCDC68Q9H2F9 335 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 BPIFA1Q9NP55 256 aa13.66□□□□□ -0.22
GPC1-209ENST00000495100 NUP214P35658 2090 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms