RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 BLOC1S5Q8TDH9 187 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 PIGSQ96S52 555 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 CDK5RAP1Q96SZ6 601 aaKnown RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 CDRT15Q96T59 188 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 MKRN2Q9H000 416 aaKnown RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 IFT122Q9HBG6 1241 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 AS3MTQ9HBK9 375 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 MOCS1Q9NZB8 636 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 TMEM181Q9P2C4 612 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 ADAM28Q9UKQ2 775 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 KIAA1257Q9ULG3 409 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 TTC24A2A3L6 582 aaPredicted RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 TCAF2A6NFQ2 919 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 TMEM191CA6NGB0 347 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 ZW10O43264 779 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 MTSS1O43312 755 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 GAS2O43903 313 aaKnown RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 AVILO75366 819 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 TMEM191BP0C7N4 346 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 SERPINB1P30740 379 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 ARRB2P32121 409 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 ELK3P41970 407 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 ATP4BP51164 291 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 YWHAZP63104 245 aaKnown RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 GAD2Q05329 585 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 SLC10A2Q12908 348 aaPredicted RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 MMRN1Q13201 1228 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 AQP6Q13520 282 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 COL19A1Q14993 1142 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 ACOX1Q15067 660 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 CEP78Q5JTW2 689 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 MEX3CQ5U5Q3 659 aaKnown RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 AGAP6Q5VW22 663 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 C15orf39Q6ZRI6 1047 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 CDR2LQ86X02 465 aaPredicted RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 FBXO11Q86XK2 927 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 LYSMD2Q8IV50 215 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 MYO1HQ8N1T3 1032 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 PELI3Q8N2H9 469 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 SFRP1Q8N474 314 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 FAM109AQ8N4B1 249 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 ZC3H15Q8WU90 426 aaKnown RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 HDAC2Q92769 488 aaKnown RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 CFAP36Q96G28 342 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 C8orf48Q96LL4 319 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 AGAP4Q96P64 663 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 KLF6Q99612 283 aaPredicted RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 HSD17B14Q9BPX1 270 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 SENP7Q9BQF6 1050 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 NAA50Q9GZZ1 169 aaKnown RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 TMEM117Q9H0C3 514 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 KCNN2Q9H2S1 579 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 TMEM8AQ9HCN3 771 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 SEPT11Q9NVA2 429 aaKnown RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 MTRRQ9UBK8 725 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 ZNF487B1APH4 448 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 BCAS1O75363 584 aaPredicted RBP4.87□□□□□ -1.63
PRKD3-210ENST00000494667 VAPBO95292 243 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 NDST3O95803 873 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 HPRP00739 348 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 GSNP06396 782 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 CDH1P12830 882 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 SLC16A2P36021 539 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 FADDQ13158 208 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 TOP3AQ13472 1001 aaPredicted RBP4.87□□□□□ -1.63
PRKD3-210ENST00000494667 DDR2Q16832 855 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 CYBRD1Q53TN4 286 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 MTX3Q5HYI7 312 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 LCN8Q6JVE9 175 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 ZNF746Q6NUN9 644 aaPredicted RBP4.87□□□□□ -1.63
PRKD3-210ENST00000494667 POTEGQ6S5H5 508 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 MFSD7Q6UXD7 560 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 WDR49Q8IV35 697 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 SCML4Q8N228 414 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 NATD1Q8N6N6 113 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 FEZF2Q8TBJ5 459 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 DYNC2LI1Q8TCX1 351 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 LRTOMTQ8WZ04 291 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 CIB1Q99828 191 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 APOL6Q9BWW8 343 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 IL22Q9GZX6 179 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 SNX25Q9H3E2 840 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 ZNF395Q9H8N7 513 aaPredicted RBP4.87□□□□□ -1.63
PRKD3-210ENST00000494667 ACOXLQ9NUZ1 547 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.87□□□□□ -1.63
PRKD3-210ENST00000494667 DTLQ9NZJ0 730 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 ABCD2Q9UBJ2 740 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 KLQ9UEF7 1012 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 SNX7Q9UNH6 387 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 C1orf232A0A0U1RR37 186 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 CLIC2O15247 247 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 ENDOD1O94919 500 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 KCNK2O95069 426 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 PRSS23O95084 383 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 GOT2P00505 430 aaKnown RBP4.87□□□□□ -1.63
PRKD3-210ENST00000494667 GSTM1P09488 218 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 TRIM49P0CI25 452 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 TRIM49CP0CI26 452 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 BMP4P12644 408 aa4.87□□□□□ -1.63
PRKD3-210ENST00000494667 ETS1P14921 441 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms