RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 C3orf70A6NLC5 250 aaPredicted RBP11.36□□□□□ -0.59
APTX-230ENST00000494649 WASH4PA8MWX3 477 aa11.36□□□□□ -0.59
APTX-230ENST00000494649 RNF103O00237 685 aa11.36□□□□□ -0.59
APTX-230ENST00000494649 PLK4O00444 970 aa11.36□□□□□ -0.59
APTX-230ENST00000494649 SRPRAP08240 638 aaKnown RBP11.36□□□□□ -0.59
APTX-230ENST00000494649 GBE1Q04446 702 aa11.36□□□□□ -0.59
APTX-230ENST00000494649 SERINC3Q13530 473 aa11.36□□□□□ -0.59
APTX-230ENST00000494649 HNRNPA1L2Q32P51 320 aaKnown RBP11.36□□□□□ -0.59
APTX-230ENST00000494649 HSF5Q4G112 596 aaPredicted RBP11.36□□□□□ -0.59
APTX-230ENST00000494649 C9orf64Q5T6V5 341 aa11.36□□□□□ -0.59
APTX-230ENST00000494649 NCBP2-AS2Q69YL0 99 aa11.36□□□□□ -0.59
APTX-230ENST00000494649 NPNTQ6UXI9 565 aa11.36□□□□□ -0.59
APTX-230ENST00000494649 PRR23BQ6ZRT6 265 aa11.36□□□□□ -0.59
APTX-230ENST00000494649 RFX6Q8HWS3 928 aa11.36□□□□□ -0.59
APTX-230ENST00000494649 MAP7D3Q8IWC1 876 aa11.36□□□□□ -0.59
APTX-230ENST00000494649 UMODL1-AS1Q8N2C9 162 aa11.36□□□□□ -0.59
APTX-230ENST00000494649 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.36□□□□□ -0.59
APTX-230ENST00000494649 PQLC3Q8N755 202 aa11.36□□□□□ -0.59
APTX-230ENST00000494649 LRRC57Q8N9N7 239 aa11.36□□□□□ -0.59
APTX-230ENST00000494649 GRIN3AQ8TCU5 1115 aa11.36□□□□□ -0.59
APTX-230ENST00000494649 FRS2Q8WU20 508 aa11.36□□□□□ -0.59
APTX-230ENST00000494649 HAUS1Q96CS2 278 aa11.36□□□□□ -0.59
APTX-230ENST00000494649 SAE1Q9UBE0 346 aaPredicted RBP11.36□□□□□ -0.59
APTX-230ENST00000494649 CYP8B1Q9UNU6 501 aa11.36□□□□□ -0.59
APTX-230ENST00000494649 HEY1Q9Y5J3 304 aa11.36□□□□□ -0.59
APTX-230ENST00000494649 WDR87Q6ZQQ6 2873 aa11.35□□□□□ -0.59
APTX-230ENST00000494649 BTNL10A8MVZ5 291 aa11.35□□□□□ -0.59
APTX-230ENST00000494649 HRO43593 1189 aa11.35□□□□□ -0.59
APTX-230ENST00000494649 KDELR3O43731 214 aa11.35□□□□□ -0.59
APTX-230ENST00000494649 KRT86O43790 486 aa11.35□□□□□ -0.59
APTX-230ENST00000494649 ALDH1A2O94788 518 aa11.35□□□□□ -0.59
APTX-230ENST00000494649 HCAR3P49019 387 aa11.35□□□□□ -0.59
APTX-230ENST00000494649 SERPINH1P50454 418 aaKnown RBP11.35□□□□□ -0.59
APTX-230ENST00000494649 PTPN5P54829 565 aa11.35□□□□□ -0.59
APTX-230ENST00000494649 ADCY2Q08462 1091 aa11.35□□□□□ -0.59
APTX-230ENST00000494649 ZNF211Q13398 564 aaPredicted RBP11.35□□□□□ -0.59
APTX-230ENST00000494649 PDK2Q15119 407 aa11.35□□□□□ -0.59
APTX-230ENST00000494649 ATXN7L2Q5T6C5 722 aaPredicted RBP11.35□□□□□ -0.59
APTX-230ENST00000494649 RETSATQ6NUM9 610 aa11.35□□□□□ -0.59
APTX-230ENST00000494649 ZNF783Q6ZMS7 281 aa11.35□□□□□ -0.59
APTX-230ENST00000494649 MAMSTRQ6ZN01 415 aa11.35□□□□□ -0.59
APTX-230ENST00000494649 PEX26Q7Z412 305 aa11.35□□□□□ -0.59
APTX-230ENST00000494649 RYBPQ8N488 228 aaPredicted RBP11.35□□□□□ -0.59
APTX-230ENST00000494649 CAMKK1Q8N5S9 505 aa11.35□□□□□ -0.59
APTX-230ENST00000494649 CHST14Q8NCH0 376 aa11.35□□□□□ -0.59
APTX-230ENST00000494649 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.35□□□□□ -0.59
APTX-230ENST00000494649 ZNF670Q9BS34 389 aa11.35□□□□□ -0.59
APTX-230ENST00000494649 HEMGNQ9BXL5 484 aa11.35□□□□□ -0.59
APTX-230ENST00000494649 PRDM16Q9HAZ2 1276 aa11.35□□□□□ -0.59
APTX-230ENST00000494649 EBF1Q9UH73 591 aa11.35□□□□□ -0.59
APTX-230ENST00000494649 HS3ST2Q9Y278 367 aa11.35□□□□□ -0.59
APTX-230ENST00000494649 NYNRINQ9P2P1 1898 aaKnown RBP11.35□□□□□ -0.59
APTX-230ENST00000494649 TTC24A2A3L6 582 aaPredicted RBP11.34□□□□□ -0.59
APTX-230ENST00000494649 ZBTB24O43167 697 aaPredicted RBP11.34□□□□□ -0.59
APTX-230ENST00000494649 PSTPIP1O43586 416 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 GJB3O75712 270 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 PAPSS2O95340 614 aaPredicted RBP11.34□□□□□ -0.59
APTX-230ENST00000494649 IL1BP01584 269 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 HTR7P34969 479 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 PSMD8P48556 350 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 CAMK2GQ13555 558 aaPredicted RBP11.34□□□□□ -0.59
APTX-230ENST00000494649 PARP15Q460N3 678 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 C22orf39Q6P5X5 142 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 NT5DC3Q86UY8 548 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 LONP2Q86WA8 852 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 RASSF3Q86WH2 238 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 FAM71BQ8TC56 605 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 ALG3Q92685 438 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 SIPA1Q96FS4 1042 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 RNF157Q96PX1 679 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 MAK16Q9BXY0 300 aaKnown RBP11.34□□□□□ -0.59
APTX-230ENST00000494649 SP110Q9HB58 689 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 ZSCAN32Q9NX65 697 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 SARDHQ9UL12 918 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 EDDM13A0A1B0GTR0 161 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 ARHGAP42A6NI28 874 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 NPC1O15118 1278 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 ATP9BO43861 1147 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 ZNF821O75541 412 aaPredicted RBP11.34□□□□□ -0.59
APTX-230ENST00000494649 TMCC1O94876 653 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 BCKDHBP21953 392 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 NDST2P52849 883 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 YBEYP58557 167 aaPredicted RBP11.34□□□□□ -0.59
APTX-230ENST00000494649 SLC10A2Q12908 348 aaPredicted RBP11.34□□□□□ -0.59
APTX-230ENST00000494649 DPY19L3Q6ZPD9 716 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 ARMCX6Q7L4S7 300 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 TXLNBQ8N3L3 684 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 OR2A12Q8NGT7 310 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 OR2T3Q8NH03 318 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 GANCQ8TET4 914 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 PRCCQ92733 491 aaPredicted RBP11.34□□□□□ -0.59
APTX-230ENST00000494649 PRRX2Q99811 253 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 FAM118BQ9BPY3 351 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 TSGA10Q9BZW7 698 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 SERGEFQ9UGK8 458 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 SUN2Q9UH99 717 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 IPO11Q9UI26 975 aaKnown RBP11.34□□□□□ -0.59
APTX-230ENST00000494649 PYCARDQ9ULZ3 195 aa11.34□□□□□ -0.59
APTX-230ENST00000494649 FAM47DPA6NHR8 397 aa11.33□□□□□ -0.6
APTX-230ENST00000494649 USP27XA6NNY8 438 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms