RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 LTB4R2Q9NPC1 389 aa15.22■□□□□ 0.03
ACTB-213ENST00000493945 SUN2Q9UH99 717 aa15.22■□□□□ 0.03
ACTB-213ENST00000493945 CLEC4EQ9ULY5 219 aa15.22■□□□□ 0.03
ACTB-213ENST00000493945 NDRG2Q9UN36 371 aaKnown RBP15.22■□□□□ 0.03
ACTB-213ENST00000493945 ZNF148Q9UQR1 794 aa15.22■□□□□ 0.03
ACTB-213ENST00000493945 HS3ST2Q9Y278 367 aa15.22■□□□□ 0.03
ACTB-213ENST00000493945 STARD13Q9Y3M8 1113 aa15.22■□□□□ 0.03
ACTB-213ENST00000493945 COL6A3P12111 3177 aa15.22■□□□□ 0.03
ACTB-213ENST00000493945 NYNRINQ9P2P1 1898 aaKnown RBP15.22■□□□□ 0.03
ACTB-213ENST00000493945 GOLGA6CA6NDK9 693 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 GOLGA6BA6NDN3 693 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 MATN3O15232 486 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 GOLGA6DP0CG33 693 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 PECAM1P16284 738 aaPredicted RBP15.21■□□□□ 0.03
ACTB-213ENST00000493945 CA4P22748 312 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 CES1P23141 567 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 STIP1P31948 543 aaKnown RBP15.21■□□□□ 0.03
ACTB-213ENST00000493945 CHRNA3P32297 505 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 ACVRL1P37023 503 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 TNNT3P45378 269 aaPredicted RBP15.21■□□□□ 0.03
ACTB-213ENST00000493945 FNTAP49354 379 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 HNRNPDQ14103 355 aaKnown RBP15.21■□□□□ 0.03
ACTB-213ENST00000493945 ACCSLQ4AC99 568 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 EOGTQ5NDL2 527 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 ITPRIPL1Q6GPH6 555 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 CCDC70Q6NSX1 233 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 C4orf22Q6V702 233 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 GSTA5Q7RTV2 222 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 ADAT2Q7Z6V5 191 aaKnown RBP15.21■□□□□ 0.03
ACTB-213ENST00000493945 DSG4Q86SJ6 1040 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 ADIPOR2Q86V24 386 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 CHPFQ8IZ52 775 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 APCDD1Q8J025 514 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 PHTF2Q8N3S3 785 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 PCDH20Q8N6Y1 951 aaKnown RBP15.21■□□□□ 0.03
ACTB-213ENST00000493945 CEP112Q8N8E3 955 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 CCDC89Q8N998 374 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 CCHCR1Q8TD31 782 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 NKD2Q969F2 451 aaPredicted RBP15.21■□□□□ 0.03
ACTB-213ENST00000493945 LMLNQ96KR4 655 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 KLC2Q9H0B6 622 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 NOL6Q9H6R4 1146 aaKnown RBP15.21■□□□□ 0.03
ACTB-213ENST00000493945 TBC1D17Q9HA65 648 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 GOLGA6AQ9NYA3 693 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 ERVW-1Q9UQF0 538 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 OR51B4Q9Y5P0 310 aa15.21■□□□□ 0.03
ACTB-213ENST00000493945 BCLAF3A2AJT9 711 aaKnown RBP15.2■□□□□ 0.02
ACTB-213ENST00000493945 SYNCRIPO60506 623 aaKnown RBP15.2■□□□□ 0.02
ACTB-213ENST00000493945 PHF2O75151 1096 aa15.2■□□□□ 0.02
ACTB-213ENST00000493945 IGSF6O95976 241 aa15.2■□□□□ 0.02
ACTB-213ENST00000493945 HNRNPLP14866 589 aaKnown RBP eCLIP15.2■□□□□ 0.02
ACTB-213ENST00000493945 MMP13P45452 471 aa15.2■□□□□ 0.02
ACTB-213ENST00000493945 RHOAP61586 193 aa15.2■□□□□ 0.02
ACTB-213ENST00000493945 SNRPD1P62314 119 aaKnown RBP15.2■□□□□ 0.02
ACTB-213ENST00000493945 LBRQ14739 615 aaKnown RBP15.2■□□□□ 0.02
ACTB-213ENST00000493945 GRM3Q14832 879 aa15.2■□□□□ 0.02
ACTB-213ENST00000493945 PRKD1Q15139 912 aaPredicted RBP15.2■□□□□ 0.02
ACTB-213ENST00000493945 RALGPS1Q5JS13 557 aa15.2■□□□□ 0.02
ACTB-213ENST00000493945 TXNDC11Q6PKC3 985 aa15.2■□□□□ 0.02
ACTB-213ENST00000493945 NPNTQ6UXI9 565 aa15.2■□□□□ 0.02
ACTB-213ENST00000493945 CREG2Q8IUH2 290 aa15.2■□□□□ 0.02
ACTB-213ENST00000493945 CCDC105Q8IYK2 499 aa15.2■□□□□ 0.02
ACTB-213ENST00000493945 C12orf50Q8NA57 414 aaPredicted RBP15.2■□□□□ 0.02
ACTB-213ENST00000493945 HTR3CQ8WXA8 447 aa15.2■□□□□ 0.02
ACTB-213ENST00000493945 MAGOHBQ96A72 148 aaKnown RBP15.2■□□□□ 0.02
ACTB-213ENST00000493945 ISG20Q96AZ6 181 aaKnown RBP15.2■□□□□ 0.02
ACTB-213ENST00000493945 ALG14Q96F25 216 aa15.2■□□□□ 0.02
ACTB-213ENST00000493945 GDAP1L1Q96MZ0 367 aa15.2■□□□□ 0.02
ACTB-213ENST00000493945 SEPT10Q9P0V9 454 aa15.2■□□□□ 0.02
ACTB-213ENST00000493945 KLHL8Q9P2G9 620 aaPredicted RBP15.2■□□□□ 0.02
ACTB-213ENST00000493945 TRHDEQ9UKU6 1024 aa15.2■□□□□ 0.02
ACTB-213ENST00000493945 INTS6Q9UL03 887 aaKnown RBP15.2■□□□□ 0.02
ACTB-213ENST00000493945 MFHAS1Q9Y4C4 1052 aa15.2■□□□□ 0.02
ACTB-213ENST00000493945 EDDM13A0A1B0GTR0 161 aa15.19■□□□□ 0.02
ACTB-213ENST00000493945 PRRT4C9JH25 899 aa15.19■□□□□ 0.02
ACTB-213ENST00000493945 SGK1O00141 431 aa15.19■□□□□ 0.02
ACTB-213ENST00000493945 NDC80O14777 642 aa15.19■□□□□ 0.02
ACTB-213ENST00000493945 ZNF185O15231 689 aa15.19■□□□□ 0.02
ACTB-213ENST00000493945 LIASO43766 372 aa15.19■□□□□ 0.02
ACTB-213ENST00000493945 SNAP91O60641 907 aa15.19■□□□□ 0.02
ACTB-213ENST00000493945 MAFKO60675 156 aa15.19■□□□□ 0.02
ACTB-213ENST00000493945 RNASEH1O60930 286 aaKnown RBP15.19■□□□□ 0.02
ACTB-213ENST00000493945 MAP3K6O95382 1288 aa15.19■□□□□ 0.02
ACTB-213ENST00000493945 ITGAVP06756 1048 aa15.19■□□□□ 0.02
ACTB-213ENST00000493945 CCNB1P14635 433 aa15.19■□□□□ 0.02
ACTB-213ENST00000493945 NTSR1P30989 418 aa15.19■□□□□ 0.02
ACTB-213ENST00000493945 IFI35P80217 286 aaPredicted RBP15.19■□□□□ 0.02
ACTB-213ENST00000493945 ARF5P84085 180 aa15.19■□□□□ 0.02
ACTB-213ENST00000493945 SFSWAPQ12872 951 aaKnown RBP15.19■□□□□ 0.02
ACTB-213ENST00000493945 P3H1Q32P28 736 aa15.19■□□□□ 0.02
ACTB-213ENST00000493945 ARTNQ5T4W7 220 aa15.19■□□□□ 0.02
ACTB-213ENST00000493945 ASTLQ6HA08 431 aaPredicted RBP15.19■□□□□ 0.02
ACTB-213ENST00000493945 FSTL4Q6MZW2 842 aa15.19■□□□□ 0.02
ACTB-213ENST00000493945 C22orf39Q6P5X5 142 aa15.19■□□□□ 0.02
ACTB-213ENST00000493945 SH2D3CQ8N5H7 860 aa15.19■□□□□ 0.02
ACTB-213ENST00000493945 OR52K2Q8NGK3 314 aa15.19■□□□□ 0.02
ACTB-213ENST00000493945 SLC35B2Q8TB61 432 aa15.19■□□□□ 0.02
ACTB-213ENST00000493945 MS4A14Q96JA4 679 aa15.19■□□□□ 0.02
ACTB-213ENST00000493945 NECAB3Q96P71 396 aaPredicted RBP15.19■□□□□ 0.02
ACTB-213ENST00000493945 POLR1EQ9GZS1 481 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms