RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 SLC35F5Q8WV83 523 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 C17orf50Q8WW18 174 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 MAIP1Q8WWC4 291 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 ARL8AQ96BM9 186 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 MRGPRX1Q96LB2 322 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 ZNF570Q96NI8 536 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 XPO6Q96QU8 1125 aaKnown RBP8.42□□□□□ -1.06
HDAC6-234ENST00000493923 MMADHCQ9H3L0 296 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-234ENST00000493923 MTG2Q9H4K7 406 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 TMBIM4Q9HC24 238 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 TMEM9BQ9NQ34 198 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 PLCB1Q9NQ66 1216 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 CTTNBP2NLQ9P2B4 639 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 THAP10Q9P2Z0 257 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-234ENST00000493923 TJP2Q9UDY2 1190 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 EVLQ9UI08 416 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-234ENST00000493923 AJAP1Q9UKB5 411 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-234ENST00000493923 RPL26L1Q9UNX3 145 aaKnown RBP8.42□□□□□ -1.06
HDAC6-234ENST00000493923 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.42□□□□□ -1.06
HDAC6-234ENST00000493923 SLC27A6Q9Y2P4 619 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 DAAM1Q9Y4D1 1078 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 HYOU1Q9Y4L1 999 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 PCDHB4Q9Y5E5 795 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 DOCK9Q9BZ29 2069 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 CACNA1GO43497 2377 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 GOLGA4Q13439 2230 aaKnown RBP8.41□□□□□ -1.06
HDAC6-234ENST00000493923 GRID2IPA4D2P6 1211 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 FOXD2O60548 495 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-234ENST00000493923 NQO1P15559 274 aaKnown RBP8.41□□□□□ -1.06
HDAC6-234ENST00000493923 ZFXP17010 805 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-234ENST00000493923 HLA-FP30511 346 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 HSPA9P38646 679 aaKnown RBP8.41□□□□□ -1.06
HDAC6-234ENST00000493923 COPAP53621 1224 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 PPP2R2AP63151 447 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 MRPS25P82663 173 aaKnown RBP8.41□□□□□ -1.06
HDAC6-234ENST00000493923 COG7P83436 770 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 BNC1Q01954 994 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 ZNF33AQ06730 810 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 KLC1Q07866 573 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 KCNH2Q12809 1159 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 KIF5AQ12840 1032 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 SNX1Q13596 522 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 FAM133BQ5BKY9 247 aaKnown RBP8.41□□□□□ -1.06
HDAC6-234ENST00000493923 CDKAL1Q5VV42 579 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 IRGCQ6NXR0 463 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 RINLQ6ZS11 566 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 IRF2BP1Q8IU81 584 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 SYT12Q8IV01 421 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 PPM1KQ8N3J5 372 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 CPXM2Q8N436 756 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 ACRBPQ8NEB7 543 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 ADAM32Q8TC27 787 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 KCNV2Q8TDN2 545 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 DYDC1Q8WWB3 177 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 KCTD13Q8WZ19 329 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 NAF1Q96HR8 494 aaKnown RBP8.41□□□□□ -1.06
HDAC6-234ENST00000493923 DHTKD1Q96HY7 919 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-234ENST00000493923 LMLNQ96KR4 655 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 SPACA7Q96KW9 195 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 HSPA12BQ96MM6 686 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 CEP63Q96MT8 703 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 NT5C1BQ96P26 610 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 DCLK3Q9C098 648 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 MIS12Q9H081 205 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 INTS2Q9H0H0 1204 aaKnown RBP8.41□□□□□ -1.06
HDAC6-234ENST00000493923 LRRC4Q9HBW1 653 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 CAPN10Q9HC96 672 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 LUC7LQ9NQ29 371 aaKnown RBP8.41□□□□□ -1.06
HDAC6-234ENST00000493923 ELOVL2Q9NXB9 296 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 SAMD15Q9P1V8 674 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 LIMA1Q9UHB6 759 aaKnown RBP8.41□□□□□ -1.06
HDAC6-234ENST00000493923 XPO7Q9UIA9 1087 aaKnown RBP8.41□□□□□ -1.06
HDAC6-234ENST00000493923 SNX12Q9UMY4 172 aa8.41□□□□□ -1.06
HDAC6-234ENST00000493923 APC2O95996 2303 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 FREM2Q5SZK8 3169 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 SPAARA0A1B0GVQ0 90 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 M0QYV0 167 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 PSMA7O14818 248 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 PMM2O15305 246 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 CEP104O60308 925 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 DIAPH2O60879 1101 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 E2F6O75461 281 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 TMCC1O94876 653 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 IGLV3-27P01718 113 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 ATP1A1P05023 1023 aaKnown RBP8.4□□□□□ -1.06
HDAC6-234ENST00000493923 CFIP05156 583 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 NCAM1P13591 858 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 ACADSP16219 412 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 ATP6V1C1P21283 382 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 CD70P32970 193 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 SKIV2L2P42285 1042 aaKnown RBP8.4□□□□□ -1.06
HDAC6-234ENST00000493923 NUMBP49757 651 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 EIF3BP55884 814 aaKnown RBP8.4□□□□□ -1.06
HDAC6-234ENST00000493923 CDK17Q00537 523 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 ZNF252P-AS1Q0IIN9 211 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 TAF5Q15542 800 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 CNGA2Q16280 664 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 PTPRNQ16849 979 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 CCDC92Q53HC0 331 aaPredicted RBP8.4□□□□□ -1.06
HDAC6-234ENST00000493923 ANKRD20A2Q5SQ80 823 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms