RNA–Protein interactions for RNA: ENST00000493726.1

LRCH3-218, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 733 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-218ENST00000493726 KRT13P13646 458 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 ARSAP15289 507 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 HDCP19113 662 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 TGM1P22735 817 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 LAMA1P25391 3075 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 ANXA13P27216 316 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 YWHAQP27348 245 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 GJA4P35212 333 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 PIK3CAP42336 1068 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 PGFP49763 221 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 MXI1P50539 228 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 RAD23BP54727 409 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 SKOR2Q2VWA4 1001 aaPredicted RBP7.99□□□□□ -1.13
LRCH3-218ENST00000493726 GTF2IRD2BQ6EKJ0 949 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 FSTL4Q6MZW2 842 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 CCDC186Q7Z3E2 898 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 FILIP1Q7Z7B0 1213 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 ACOT1Q86TX2 421 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 GTF2IRD2Q86UP8 949 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 ARL14EPQ8N8R7 260 aaPredicted RBP7.99□□□□□ -1.13
LRCH3-218ENST00000493726 C12orf29Q8N999 325 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 TRIML1Q8N9V2 468 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 SLC4A11Q8NBS3 891 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 NETO2Q8NC67 525 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 SCAMP5Q8TAC9 235 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 SLC2A14Q8TDB8 520 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 SH3RF2Q8TEC5 729 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 ATP2A3Q93084 1043 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 SMARCE1Q969G3 411 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 OTUB2Q96DC9 234 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 PEX11GQ96HA9 241 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 NOX5Q96PH1 765 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 SLITRK1Q96PX8 696 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 ECT2Q9H8V3 914 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 FBRSL1Q9HCM7 1045 aaKnown RBP7.99□□□□□ -1.13
LRCH3-218ENST00000493726 SPATA6Q9NWH7 488 aaPredicted RBP7.99□□□□□ -1.13
LRCH3-218ENST00000493726 MARCH2Q9P0N8 246 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 MAN1B1Q9UKM7 699 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 MAGED2Q9UNF1 606 aaPredicted RBP7.99□□□□□ -1.13
LRCH3-218ENST00000493726 CNTN6Q9UQ52 1028 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 SCML2Q9UQR0 700 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 R4GN57 208 aa7.99□□□□□ -1.13
LRCH3-218ENST00000493726 E2F8A0AVK6 867 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 B2RBV5 119 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 LEFTY2O00292 366 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 SMAD7O15105 426 aaKnown RBP7.98□□□□□ -1.13
LRCH3-218ENST00000493726 COCHO43405 550 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 TBX1O43435 398 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 CKMP06732 381 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 EPB41P11171 864 aaKnown RBP7.98□□□□□ -1.13
LRCH3-218ENST00000493726 CCDC130P13994 396 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 ATF4P18848 351 aaPredicted RBP7.98□□□□□ -1.13
LRCH3-218ENST00000493726 ACO1P21399 889 aaKnown RBP7.98□□□□□ -1.13
LRCH3-218ENST00000493726 DRD1P21728 446 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 CNR2P34972 360 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 OPRD1P41143 372 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 ID4P47928 161 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 CXCL12P48061 93 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 KPNA1P52294 538 aaPredicted RBP7.98□□□□□ -1.13
LRCH3-218ENST00000493726 KIF11P52732 1056 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 ZNF132P52740 706 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 SATB1Q01826 763 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 CYP4F3Q08477 520 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 FBXO43Q4G163 708 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 TRIM68Q6AZZ1 485 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 C6orf15Q6UXA7 325 aaPredicted RBP7.98□□□□□ -1.13
LRCH3-218ENST00000493726 LIPIQ6XZB0 460 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 SCARA5Q6ZMJ2 495 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 Q6ZS52 159 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 HTR3DQ70Z44 454 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 BHLHA9Q7RTU4 235 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 GPRIN1Q7Z2K8 1008 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 DDX42Q86XP3 938 aaKnown RBP eCLIP7.98□□□□□ -1.13
LRCH3-218ENST00000493726 TRIM59Q8IWR1 403 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 SCML4Q8N228 414 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 CPA6Q8N4T0 437 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 MED15Q96RN5 788 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 SYT3Q9BQG1 590 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 DUSP16Q9BY84 665 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 IMPG2Q9BZV3 1241 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 LINC00597Q9H2U6 94 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 FBXO44Q9H4M3 255 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 EBF3Q9H4W6 596 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 METTL14Q9HCE5 456 aaKnown RBP7.98□□□□□ -1.13
LRCH3-218ENST00000493726 CISHQ9NSE2 258 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 C2orf42Q9NWW7 574 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 CLIC5Q9NZA1 410 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 HOOK1Q9UJC3 728 aaKnown RBP7.98□□□□□ -1.13
LRCH3-218ENST00000493726 NUDT5Q9UKK9 219 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 STRIP2Q9ULQ0 834 aa7.98□□□□□ -1.13
LRCH3-218ENST00000493726 NDRG2Q9UN36 371 aaKnown RBP7.98□□□□□ -1.13
LRCH3-218ENST00000493726 TPRP12270 2363 aaKnown RBP7.97□□□□□ -1.13
LRCH3-218ENST00000493726 CHD8Q9HCK8 2581 aa7.97□□□□□ -1.13
LRCH3-218ENST00000493726 FRYQ5TBA9 3013 aa7.97□□□□□ -1.13
LRCH3-218ENST00000493726 TRBV23OR9-2A0A075B6M9 112 aa7.97□□□□□ -1.13
LRCH3-218ENST00000493726 TRIM49BA6NDI0 452 aa7.97□□□□□ -1.13
LRCH3-218ENST00000493726 GOLGA6L4A6NEF3 574 aa7.97□□□□□ -1.13
LRCH3-218ENST00000493726 SLC9A3R1O14745 358 aaPredicted RBP7.97□□□□□ -1.13
LRCH3-218ENST00000493726 PSMA7O14818 248 aa7.97□□□□□ -1.13
LRCH3-218ENST00000493726 HOXC11O43248 304 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms