RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 ATP13A1Q9HD20 1204 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 NDFIP2Q9NV92 336 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 SLC25A13Q9UJS0 675 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 PLA2G4CQ9UP65 541 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 RAD54BQ9Y620 910 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 STON1Q9Y6Q2 735 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 THADAQ6YHU6 1953 aa11.87□□□□□ -0.51
CTSA-209ENST00000493522 A0A0D9SEW6 157 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 A0A0U1RQJ8 604 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 TCRBV21S2A2A0A5A6 115 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 LNP1A1A4G5 178 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 ILVBLA1L0T0 632 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 MACROD2A1Z1Q3 448 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 BTNL10A8MVZ5 291 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 KHNYNO15037 678 aaKnown RBP11.86□□□□□ -0.51
CTSA-209ENST00000493522 RAMP2O60895 175 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 KRT1P04264 644 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 CCDC175P0C221 793 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 HLA-EP13747 358 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 COMTP21964 271 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 PRKCHP24723 683 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 ETFBP38117 255 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 SLC1A1P43005 524 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 STK19P49842 368 aaPredicted RBP11.86□□□□□ -0.51
CTSA-209ENST00000493522 PLK1P53350 603 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 SULT2A1Q06520 285 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 PTPRNQ16849 979 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 PMS2CLQ68D20 193 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 ZNF783Q6ZMS7 281 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 DAAM2Q86T65 1068 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 ZNF366Q8N895 744 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 DCAF4L2Q8NA75 395 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 TPCN2Q8NHX9 752 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 TTC17Q96AE7 1141 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 ALG14Q96F25 216 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 GABRG3Q99928 467 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 C2orf49Q9BVC5 232 aaPredicted RBP11.86□□□□□ -0.51
CTSA-209ENST00000493522 CALN1Q9BXU9 219 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 RETREG1Q9H6L5 497 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 POLMQ9NP87 494 aaPredicted RBP11.86□□□□□ -0.51
CTSA-209ENST00000493522 TMEM9BQ9NQ34 198 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 CWC15Q9P013 229 aaKnown RBP11.86□□□□□ -0.51
CTSA-209ENST00000493522 BCCIPQ9P287 314 aaKnown RBP eCLIP11.86□□□□□ -0.51
CTSA-209ENST00000493522 TRIM10Q9UDY6 481 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 SALL4Q9UJQ4 1053 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 ERVW-1Q9UQF0 538 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 ADGRG1Q9Y653 693 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 DUSP10Q9Y6W6 482 aa11.86□□□□□ -0.51
CTSA-209ENST00000493522 LRRD1A4D1F6 860 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 WASH3PC4AMC7 463 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 CBX4O00257 560 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 SNAP91O60641 907 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 EPHX1P07099 455 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 SRPRAP08240 638 aaKnown RBP11.85□□□□□ -0.51
CTSA-209ENST00000493522 ERCC2P18074 760 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 GLDCP23378 1020 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 ECT2LQ008S8 904 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 DPYSQ14117 519 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 CRY1Q16526 586 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 IFI16Q16666 785 aaKnown RBP11.85□□□□□ -0.51
CTSA-209ENST00000493522 ATP13A4Q4VNC1 1196 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 ODF2Q5BJF6 829 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 ANO7Q6IWH7 933 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 UNQ6494/PRO21346Q6UXR6 183 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 TMEM92Q6UXU6 159 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 CYP2U1Q7Z449 544 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 POLNQ7Z5Q5 900 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 RHOT1Q8IXI2 618 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 KCTD6Q8NC69 237 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 PDLIM2Q96JY6 352 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 CALR3Q96L12 384 aaKnown RBP11.85□□□□□ -0.51
CTSA-209ENST00000493522 RPL10LQ96L21 214 aaKnown RBP11.85□□□□□ -0.51
CTSA-209ENST00000493522 MRGPRX3Q96LB0 322 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 CSPG4P5Q96PW8 444 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 PSMB7Q99436 277 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 TPSD1Q9BZJ3 242 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 TSGA10Q9BZW7 698 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 DONSONQ9NYP3 566 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 VPS51Q9UID3 782 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 OR51B4Q9Y5P0 310 aa11.85□□□□□ -0.51
CTSA-209ENST00000493522 IGF2RP11717 2491 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 TNRC6BQ9UPQ9 1833 aaKnown RBP11.84□□□□□ -0.51
CTSA-209ENST00000493522 WASH4PA8MWX3 477 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 RASA4BC9J798 803 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 ZBTB24O43167 697 aaPredicted RBP11.84□□□□□ -0.51
CTSA-209ENST00000493522 RASA4O43374 803 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 PSTPIP1O43586 416 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 SYNCRIPO60506 623 aaKnown RBP11.84□□□□□ -0.51
CTSA-209ENST00000493522 ALDH1A2O94788 518 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 CD48P09326 243 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 AMPD1P23109 780 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 ACVRL1P37023 503 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 NNMTP40261 264 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 HCAR3P49019 387 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 FOXC1Q12948 553 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 MMRN1Q13201 1228 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 ENPP2Q13822 863 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 DPYSL3Q14195 570 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 POLD3Q15054 466 aaPredicted RBP11.84□□□□□ -0.51
CTSA-209ENST00000493522 PDK2Q15119 407 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms