RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 NRG1Q02297 640 aaPredicted RBP6.97□□□□□ -1.29
VPS52-219ENST00000493379 GAD2Q05329 585 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 SCAPQ12770 1279 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 MAMLD1Q13495 774 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 SLC18A3Q16572 532 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 CCDC14Q49A88 953 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 FBXO43Q4G163 708 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 DCAF6Q58WW2 860 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 FAM133BQ5BKY9 247 aaKnown RBP6.97□□□□□ -1.29
VPS52-219ENST00000493379 RPS26P11Q5JNZ5 115 aaPredicted RBP6.97□□□□□ -1.29
VPS52-219ENST00000493379 DGKKQ5KSL6 1271 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 COLEC12Q5KU26 742 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 BRMS1LQ5PSV4 323 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 LY6G5CQ5SRR4 150 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 PIK3R6Q5UE93 754 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 FYB2Q5VWT5 728 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 TRIM68Q6AZZ1 485 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 NADSYN1Q6IA69 706 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 TXNDC11Q6PKC3 985 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 MMS22LQ6ZRQ5 1243 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 RSRC2Q7L4I2 434 aaKnown RBP6.97□□□□□ -1.29
VPS52-219ENST00000493379 STRADAQ7RTN6 431 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.97□□□□□ -1.29
VPS52-219ENST00000493379 TAC4Q86UU9 113 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 TMEM25Q86YD3 366 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 MIB1Q86YT6 1006 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 CNGA4Q8IV77 575 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 ZNF683Q8IZ20 524 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 CPA6Q8N4T0 437 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 CSGALNACT1Q8TDX6 532 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 CPLX3Q8WVH0 158 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 FAM149B1Q96BN6 582 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 LMLNQ96KR4 655 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 BTN2A3PQ96KV6 586 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 PANX2Q96RD6 677 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 UBL7Q96S82 380 aaPredicted RBP6.97□□□□□ -1.29
VPS52-219ENST00000493379 HAPLN3Q96S86 360 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 SPON2Q9BUD6 331 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 PDCL3Q9H2J4 239 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 FBRSL1Q9HCM7 1045 aaKnown RBP6.97□□□□□ -1.29
VPS52-219ENST00000493379 IMPACTQ9P2X3 320 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 LSM7Q9UK45 103 aaKnown RBP6.97□□□□□ -1.29
VPS52-219ENST00000493379 STARD13Q9Y3M8 1113 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 WNT6Q9Y6F9 365 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 PIAS3Q9Y6X2 628 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 IGLV3-10A0A075B6K4 115 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 ANKRD62A6NC57 917 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 FAM170BA6NMN3 283 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 DRGXA6NNA5 263 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 CHURC1-FNTBB4DL54 471 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 I6L893 689 aaPredicted RBP6.96□□□□□ -1.3
VPS52-219ENST00000493379 K7EQS6 105 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 ENC1O14682 589 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 CAPN9O14815 690 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 NCAM2O15394 837 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 MSI1O43347 362 aaKnown RBP6.96□□□□□ -1.3
VPS52-219ENST00000493379 GHRHP01286 108 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 CYP1A2P05177 515 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 PLEKP08567 350 aaPredicted RBP6.96□□□□□ -1.3
VPS52-219ENST00000493379 CELA3AP09093 270 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 ATF4P18848 351 aaPredicted RBP6.96□□□□□ -1.3
VPS52-219ENST00000493379 TFE3P19532 575 aaPredicted RBP6.96□□□□□ -1.3
VPS52-219ENST00000493379 DRD1P21728 446 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 CD72P21854 359 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 RRM1P23921 792 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 CCR1P32246 355 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 EIF4A3P38919 411 aaKnown RBP6.96□□□□□ -1.3
VPS52-219ENST00000493379 TNFRSF4P43489 277 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 SLC11A2P49281 568 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 ZNF143P52747 638 aaPredicted RBP6.96□□□□□ -1.3
VPS52-219ENST00000493379 ADKP55263 362 aaKnown RBP6.96□□□□□ -1.3
VPS52-219ENST00000493379 RIPPLY3P57055 190 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 PCBP4P57723 403 aaKnown RBP6.96□□□□□ -1.3
VPS52-219ENST00000493379 ENPP2Q13822 863 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 SIM2Q14190 667 aaPredicted RBP6.96□□□□□ -1.3
VPS52-219ENST00000493379 UBXN2BQ14CS0 331 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 HSF5Q4G112 596 aaPredicted RBP6.96□□□□□ -1.3
VPS52-219ENST00000493379 PREPLQ4J6C6 727 aaPredicted RBP6.96□□□□□ -1.3
VPS52-219ENST00000493379 C2CD6Q53TS8 623 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 FSTL4Q6MZW2 842 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 ALKBH5Q6P6C2 394 aaKnown RBP6.96□□□□□ -1.3
VPS52-219ENST00000493379 TPRG1Q6ZUI0 275 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 VPS36Q86VN1 386 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 ARFGAP1Q8N6T3 406 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.96□□□□□ -1.3
VPS52-219ENST00000493379 C12orf50Q8NA57 414 aaPredicted RBP6.96□□□□□ -1.3
VPS52-219ENST00000493379 CCDC26Q8TAB7 109 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 JOSD2Q8TAC2 188 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 RXFP2Q8WXD0 754 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 EZH1Q92800 747 aaPredicted RBP6.96□□□□□ -1.3
VPS52-219ENST00000493379 EXOC4Q96A65 974 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 TRIM11Q96F44 468 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 RHOVQ96L33 236 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 CHP1Q99653 195 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 C11orf70Q9BRQ4 267 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 NACA2Q9H009 215 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 OSBPL2Q9H1P3 480 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 PIGVQ9NUD9 493 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 PARVAQ9NVD7 372 aa6.96□□□□□ -1.3
VPS52-219ENST00000493379 RASAL2Q9UJF2 1139 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms