RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 NPNTQ6UXI9 565 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 BBS12Q6ZW61 710 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 NLRP14Q86W24 1093 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 CREG2Q8IUH2 290 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 CHPFQ8IZ52 775 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 PHTF2Q8N3S3 785 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 FAM160A2Q8N612 972 aaPredicted RBP13.74□□□□□ -0.21
MSH6-208ENST00000493177 PLD5Q8N7P1 536 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 IL17RCQ8NAC3 791 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 NETO2Q8NC67 525 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 ACTRT1Q8TDG2 376 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 UCMAQ8WVF2 138 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 HMGB4Q8WW32 186 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 CELF6Q96J87 481 aaKnown RBP13.74□□□□□ -0.21
MSH6-208ENST00000493177 SPACA7Q96KW9 195 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 NDFIP2Q9NV92 336 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 RNF14Q9UBS8 474 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 INVSQ9Y283 1065 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 GOLGA6L10A0A0M3HER8 536 aa13.73□□□□□ -0.21
MSH6-208ENST00000493177 ANTXRLA6NF34 631 aa13.73□□□□□ -0.21
MSH6-208ENST00000493177 DFFAO00273 331 aa13.73□□□□□ -0.21
MSH6-208ENST00000493177 TRIM24O15164 1050 aa13.73□□□□□ -0.21
MSH6-208ENST00000493177 MFSD11O43934 449 aa13.73□□□□□ -0.21
MSH6-208ENST00000493177 RAMP2O60895 175 aa13.73□□□□□ -0.21
MSH6-208ENST00000493177 RHOBTB1O94844 696 aa13.73□□□□□ -0.21
MSH6-208ENST00000493177 MAP3K6O95382 1288 aa13.73□□□□□ -0.21
MSH6-208ENST00000493177 HOXD9P28356 352 aaPredicted RBP13.73□□□□□ -0.21
MSH6-208ENST00000493177 KIR2DL1P43626 348 aaPredicted RBP13.73□□□□□ -0.21
MSH6-208ENST00000493177 GBE1Q04446 702 aa13.73□□□□□ -0.21
MSH6-208ENST00000493177 TUBB2AQ13885 445 aa13.73□□□□□ -0.21
MSH6-208ENST00000493177 PAFAH1B3Q15102 231 aaKnown RBP13.73□□□□□ -0.21
MSH6-208ENST00000493177 WHAMMP3Q1A5X7 153 aa13.73□□□□□ -0.21
MSH6-208ENST00000493177 MPP7Q5T2T1 576 aa13.73□□□□□ -0.21
MSH6-208ENST00000493177 ARTNQ5T4W7 220 aa13.73□□□□□ -0.21
MSH6-208ENST00000493177 KBTBD6Q86V97 674 aa13.73□□□□□ -0.21
MSH6-208ENST00000493177 LZTR1Q8N653 840 aa13.73□□□□□ -0.21
MSH6-208ENST00000493177 TTC13Q8NBP0 860 aa13.73□□□□□ -0.21
MSH6-208ENST00000493177 KCNV2Q8TDN2 545 aa13.73□□□□□ -0.21
MSH6-208ENST00000493177 P3H4Q92791 437 aa13.73□□□□□ -0.21
MSH6-208ENST00000493177 FAM118BQ9BPY3 351 aa13.73□□□□□ -0.21
MSH6-208ENST00000493177 TUBB2BQ9BVA1 445 aa13.73□□□□□ -0.21
MSH6-208ENST00000493177 AP1M1Q9BXS5 423 aa13.73□□□□□ -0.21
MSH6-208ENST00000493177 RETREG1Q9H6L5 497 aa13.73□□□□□ -0.21
MSH6-208ENST00000493177 EBF1Q9UH73 591 aa13.73□□□□□ -0.21
MSH6-208ENST00000493177 TTC7AQ9ULT0 858 aaPredicted RBP13.73□□□□□ -0.21
MSH6-208ENST00000493177 CEP192Q8TEP8 1941 aa13.72□□□□□ -0.21
MSH6-208ENST00000493177 A0A0A0MRY4 1105 aa13.72□□□□□ -0.21
MSH6-208ENST00000493177 APOC4-APOC2K7ER74 178 aa13.72□□□□□ -0.21
MSH6-208ENST00000493177 KRIT1O00522 736 aa13.72□□□□□ -0.21
MSH6-208ENST00000493177 MAP3K13O43283 966 aa13.72□□□□□ -0.21
MSH6-208ENST00000493177 PENKP01210 267 aaPredicted RBP13.72□□□□□ -0.21
MSH6-208ENST00000493177 APOC2P02655 101 aa13.72□□□□□ -0.21
MSH6-208ENST00000493177 PECAM1P16284 738 aaPredicted RBP13.72□□□□□ -0.21
MSH6-208ENST00000493177 NTSR1P30989 418 aa13.72□□□□□ -0.21
MSH6-208ENST00000493177 OTUD4Q01804 1114 aaKnown RBP13.72□□□□□ -0.21
MSH6-208ENST00000493177 LMNB2Q03252 620 aa13.72□□□□□ -0.21
MSH6-208ENST00000493177 KLF1Q13351 362 aaPredicted RBP13.72□□□□□ -0.21
MSH6-208ENST00000493177 POLD3Q15054 466 aaPredicted RBP13.72□□□□□ -0.21
MSH6-208ENST00000493177 E2F5Q15329 346 aa13.72□□□□□ -0.21
MSH6-208ENST00000493177 EGFLAMQ63HQ2 1017 aa13.72□□□□□ -0.21
MSH6-208ENST00000493177 TMEM92Q6UXU6 159 aa13.72□□□□□ -0.21
MSH6-208ENST00000493177 BZW1Q7L1Q6 419 aaKnown RBP13.72□□□□□ -0.21
MSH6-208ENST00000493177 SETD3Q86TU7 594 aaPredicted RBP13.72□□□□□ -0.21
MSH6-208ENST00000493177 C11orf74Q86VG3 221 aa13.72□□□□□ -0.21
MSH6-208ENST00000493177 NPWQ8N729 165 aa13.72□□□□□ -0.21
MSH6-208ENST00000493177 ZNF557Q8N988 423 aaPredicted RBP13.72□□□□□ -0.21
MSH6-208ENST00000493177 C12orf50Q8NA57 414 aaPredicted RBP13.72□□□□□ -0.21
MSH6-208ENST00000493177 MDGA1Q8NFP4 955 aa13.72□□□□□ -0.21
MSH6-208ENST00000493177 ACTL9Q8TC94 416 aa13.72□□□□□ -0.21
MSH6-208ENST00000493177 C1orf54Q8WWF1 131 aa13.72□□□□□ -0.21
MSH6-208ENST00000493177 ERLEC1Q96DZ1 483 aa13.72□□□□□ -0.21
MSH6-208ENST00000493177 P2RY11Q96G91 374 aa13.72□□□□□ -0.21
MSH6-208ENST00000493177 SPON2Q9BUD6 331 aa13.72□□□□□ -0.21
MSH6-208ENST00000493177 CIPCQ9C0C6 399 aa13.72□□□□□ -0.21
MSH6-208ENST00000493177 MUC3BQ9H195 1237 aa13.72□□□□□ -0.21
MSH6-208ENST00000493177 ARRDC1-AS1Q9H2J1 176 aa13.72□□□□□ -0.21
MSH6-208ENST00000493177 KIAA1522Q9P206 1035 aaPredicted RBP13.72□□□□□ -0.21
MSH6-208ENST00000493177 SAE1Q9UBE0 346 aaPredicted RBP13.72□□□□□ -0.21
MSH6-208ENST00000493177 CDV3Q9UKY7 258 aaKnown RBP13.72□□□□□ -0.21
MSH6-208ENST00000493177 CLEC4EQ9ULY5 219 aa13.72□□□□□ -0.21
MSH6-208ENST00000493177 MRFAP1Q9Y605 127 aa13.72□□□□□ -0.21
MSH6-208ENST00000493177 ARHGAP42A6NI28 874 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 RASA4BC9J798 803 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 H7C0C1 242 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 PDE2AO00408 941 aaPredicted RBP13.71□□□□□ -0.21
MSH6-208ENST00000493177 MCF2LO15068 1137 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 RASA4O43374 803 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 LRP3O75074 770 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 MX2P20592 715 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 CSKP41240 450 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 ATP5OP48047 213 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 NR2C2P49116 596 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 NUMBP49757 651 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 NDST2P52849 883 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 OXCT1P55809 520 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 EIF3EP60228 445 aaKnown RBP13.71□□□□□ -0.21
MSH6-208ENST00000493177 GNA12Q03113 381 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 SNX1Q13596 522 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 BYSLQ13895 437 aaKnown RBP13.71□□□□□ -0.21
MSH6-208ENST00000493177 AASDHQ4L235 1098 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms