RNA–Protein interactions for RNA: ENST00000492806.5

CCDC13-208, Transcript of coiled-coil domain containing 13, humanhuman

TSL 2

Gene CCDC13, Length 1,267 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-208ENST00000492806 PTPRZ1P23471 2315 aaPredicted RBP17.1■□□□□ 0.33
CCDC13-208ENST00000492806 TTC34A8MYJ7 566 aa17.09■□□□□ 0.33
CCDC13-208ENST00000492806 CD48P09326 243 aa17.09■□□□□ 0.33
CCDC13-208ENST00000492806 ZFXP17010 805 aaPredicted RBP17.09■□□□□ 0.33
CCDC13-208ENST00000492806 GABRG2P18507 467 aa17.09■□□□□ 0.33
CCDC13-208ENST00000492806 CTNNA2P26232 953 aa17.09■□□□□ 0.33
CCDC13-208ENST00000492806 CTNNA1P35221 906 aaKnown RBP17.09■□□□□ 0.33
CCDC13-208ENST00000492806 FNTBP49356 437 aa17.09■□□□□ 0.33
CCDC13-208ENST00000492806 SERPINH1P50454 418 aaKnown RBP17.09■□□□□ 0.33
CCDC13-208ENST00000492806 ARF5P84085 180 aa17.09■□□□□ 0.33
CCDC13-208ENST00000492806 ZBTB16Q05516 673 aa17.09■□□□□ 0.33
CCDC13-208ENST00000492806 MMRN1Q13201 1228 aa17.09■□□□□ 0.33
CCDC13-208ENST00000492806 BYSLQ13895 437 aaKnown RBP17.09■□□□□ 0.33
CCDC13-208ENST00000492806 PAFAH1B3Q15102 231 aaKnown RBP17.09■□□□□ 0.33
CCDC13-208ENST00000492806 DLG2Q15700 870 aa17.09■□□□□ 0.33
CCDC13-208ENST00000492806 INO80DQ53TQ3 878 aaPredicted RBP17.09■□□□□ 0.33
CCDC13-208ENST00000492806 KIAA1211LQ6NV74 962 aa17.09■□□□□ 0.33
CCDC13-208ENST00000492806 ZNF354CQ86Y25 554 aa17.09■□□□□ 0.33
CCDC13-208ENST00000492806 ARHGAP12Q8IWW6 846 aa17.09■□□□□ 0.33
CCDC13-208ENST00000492806 PLPP6Q8IY26 295 aa17.09■□□□□ 0.33
CCDC13-208ENST00000492806 PCDH19Q8TAB3 1148 aa17.09■□□□□ 0.33
CCDC13-208ENST00000492806 HMGB4Q8WW32 186 aa17.09■□□□□ 0.33
CCDC13-208ENST00000492806 ATRIPQ8WXE1 791 aa17.09■□□□□ 0.33
CCDC13-208ENST00000492806 NKD2Q969F2 451 aaPredicted RBP17.09■□□□□ 0.33
CCDC13-208ENST00000492806 ISG20Q96AZ6 181 aaKnown RBP17.09■□□□□ 0.33
CCDC13-208ENST00000492806 SLC39A8Q9C0K1 460 aa17.09■□□□□ 0.33
CCDC13-208ENST00000492806 SEMA4AQ9H3S1 761 aa17.09■□□□□ 0.33
CCDC13-208ENST00000492806 GOLPH3Q9H4A6 298 aa17.09■□□□□ 0.33
CCDC13-208ENST00000492806 PRSS16Q9NQE7 514 aa17.09■□□□□ 0.33
CCDC13-208ENST00000492806 BCCIPQ9P287 314 aaKnown RBP eCLIP17.09■□□□□ 0.33
CCDC13-208ENST00000492806 GUCA1BQ9UMX6 200 aa17.09■□□□□ 0.33
CCDC13-208ENST00000492806 PPP2R2CQ9Y2T4 447 aa17.09■□□□□ 0.33
CCDC13-208ENST00000492806 FARP1Q9Y4F1 1045 aaPredicted RBP17.09■□□□□ 0.33
CCDC13-208ENST00000492806 PCDHA3Q9Y5H8 950 aa17.09■□□□□ 0.33
CCDC13-208ENST00000492806 RAD54BQ9Y620 910 aa17.09■□□□□ 0.33
CCDC13-208ENST00000492806 SHROOM3Q8TF72 1996 aa17.08■□□□□ 0.33
CCDC13-208ENST00000492806 A0A0U1RQJ8 604 aa17.08■□□□□ 0.32
CCDC13-208ENST00000492806 C3orf70A6NLC5 250 aaPredicted RBP17.08■□□□□ 0.32
CCDC13-208ENST00000492806 MIF4GDA9UHW6 222 aaKnown RBP17.08■□□□□ 0.32
CCDC13-208ENST00000492806 ALOX15BO15296 676 aa17.08■□□□□ 0.32
CCDC13-208ENST00000492806 RNASEH1O60930 286 aaKnown RBP17.08■□□□□ 0.32
CCDC13-208ENST00000492806 SIN3BO75182 1162 aa17.08■□□□□ 0.32
CCDC13-208ENST00000492806 PALMO75781 387 aa17.08■□□□□ 0.32
CCDC13-208ENST00000492806 ZRANB2O95218 330 aaKnown RBP eCLIP17.08■□□□□ 0.32
CCDC13-208ENST00000492806 TNNT1P13805 278 aa17.08■□□□□ 0.32
CCDC13-208ENST00000492806 GLDCP23378 1020 aa17.08■□□□□ 0.32
CCDC13-208ENST00000492806 PAPOLAP51003 745 aaKnown RBP17.08■□□□□ 0.32
CCDC13-208ENST00000492806 SFSWAPQ12872 951 aaKnown RBP17.08■□□□□ 0.32
CCDC13-208ENST00000492806 ELAVL3Q14576 367 aaKnown RBP17.08■□□□□ 0.32
CCDC13-208ENST00000492806 TAZQ16635 292 aa17.08■□□□□ 0.32
CCDC13-208ENST00000492806 ACCSLQ4AC99 568 aa17.08■□□□□ 0.32
CCDC13-208ENST00000492806 TMCO4Q5TGY1 634 aa17.08■□□□□ 0.32
CCDC13-208ENST00000492806 HEATR6Q6AI08 1181 aaKnown RBP17.08■□□□□ 0.32
CCDC13-208ENST00000492806 PEX26Q7Z412 305 aa17.08■□□□□ 0.32
CCDC13-208ENST00000492806 DSG4Q86SJ6 1040 aa17.08■□□□□ 0.32
CCDC13-208ENST00000492806 NT5DC3Q86UY8 548 aa17.08■□□□□ 0.32
CCDC13-208ENST00000492806 C11orf74Q86VG3 221 aa17.08■□□□□ 0.32
CCDC13-208ENST00000492806 RCOR2Q8IZ40 523 aa17.08■□□□□ 0.32
CCDC13-208ENST00000492806 PGBD3Q8N328 593 aa17.08■□□□□ 0.32
CCDC13-208ENST00000492806 PCDH20Q8N6Y1 951 aaKnown RBP17.08■□□□□ 0.32
CCDC13-208ENST00000492806 NPWQ8N729 165 aa17.08■□□□□ 0.32
CCDC13-208ENST00000492806 MDGA1Q8NFP4 955 aa17.08■□□□□ 0.32
CCDC13-208ENST00000492806 EXD1Q8NHP7 514 aa17.08■□□□□ 0.32
CCDC13-208ENST00000492806 PTPRN2Q92932 1015 aa17.08■□□□□ 0.32
CCDC13-208ENST00000492806 MRGPRX1Q96LB2 322 aa17.08■□□□□ 0.32
CCDC13-208ENST00000492806 MAK16Q9BXY0 300 aaKnown RBP17.08■□□□□ 0.32
CCDC13-208ENST00000492806 ETNK2Q9NVF9 386 aa17.08■□□□□ 0.32
CCDC13-208ENST00000492806 KLHL11Q9NVR0 708 aa17.08■□□□□ 0.32
CCDC13-208ENST00000492806 SCML1Q9UN30 329 aa17.08■□□□□ 0.32
CCDC13-208ENST00000492806 VPS13AQ96RL7 3174 aa17.07■□□□□ 0.32
CCDC13-208ENST00000492806 PRAMEF11O60813 436 aa17.07■□□□□ 0.32
CCDC13-208ENST00000492806 LILRB5O75023 590 aa17.07■□□□□ 0.32
CCDC13-208ENST00000492806 ZNF217O75362 1048 aa17.07■□□□□ 0.32
CCDC13-208ENST00000492806 MT-CO1P00395 513 aa17.07■□□□□ 0.32
CCDC13-208ENST00000492806 NDUFV2P19404 249 aa17.07■□□□□ 0.32
CCDC13-208ENST00000492806 CETN2P41208 172 aa17.07■□□□□ 0.32
CCDC13-208ENST00000492806 NUMBP49757 651 aa17.07■□□□□ 0.32
CCDC13-208ENST00000492806 COPAP53621 1224 aa17.07■□□□□ 0.32
CCDC13-208ENST00000492806 COPS2P61201 443 aa17.07■□□□□ 0.32
CCDC13-208ENST00000492806 IL10RBQ08334 325 aa17.07■□□□□ 0.32
CCDC13-208ENST00000492806 TFDP2Q14188 446 aa17.07■□□□□ 0.32
CCDC13-208ENST00000492806 USP39Q53GS9 565 aaKnown RBP17.07■□□□□ 0.32
CCDC13-208ENST00000492806 C9orf64Q5T6V5 341 aa17.07■□□□□ 0.32
CCDC13-208ENST00000492806 ZNF776Q68DI1 518 aaPredicted RBP17.07■□□□□ 0.32
CCDC13-208ENST00000492806 C22orf39Q6P5X5 142 aa17.07■□□□□ 0.32
CCDC13-208ENST00000492806 LINGO4Q6UY18 593 aa17.07■□□□□ 0.32
CCDC13-208ENST00000492806 TMPRSS6Q8IU80 811 aa17.07■□□□□ 0.32
CCDC13-208ENST00000492806 ZNF366Q8N895 744 aa17.07■□□□□ 0.32
CCDC13-208ENST00000492806 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.07■□□□□ 0.32
CCDC13-208ENST00000492806 OR8D1Q8WZ84 308 aa17.07■□□□□ 0.32
CCDC13-208ENST00000492806 PRCCQ92733 491 aaPredicted RBP17.07■□□□□ 0.32
CCDC13-208ENST00000492806 SIPA1Q96FS4 1042 aa17.07■□□□□ 0.32
CCDC13-208ENST00000492806 CELF6Q96J87 481 aaKnown RBP17.07■□□□□ 0.32
CCDC13-208ENST00000492806 ZNF599Q96NL3 588 aa17.07■□□□□ 0.32
CCDC13-208ENST00000492806 RSPH9Q9H1X1 276 aaPredicted RBP17.07■□□□□ 0.32
CCDC13-208ENST00000492806 ZFHX2Q9C0A1 2572 aaPredicted RBP17.07■□□□□ 0.32
CCDC13-208ENST00000492806 RIF1Q5UIP0 2472 aaKnown RBP17.07■□□□□ 0.32
CCDC13-208ENST00000492806 DFFAO00273 331 aa17.06■□□□□ 0.32
CCDC13-208ENST00000492806 ZSCAN12O43309 604 aa17.06■□□□□ 0.32
CCDC13-208ENST00000492806 SMAD6O43541 496 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms