RNA–Protein interactions for RNA: ENST00000492403.1

EPHB4-208, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-208ENST00000492403 MAP2K3P46734 347 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 TUFMP49411 452 aaKnown RBP10.63□□□□□ -0.71
EPHB4-208ENST00000492403 KPNA1P52294 538 aaPredicted RBP10.63□□□□□ -0.71
EPHB4-208ENST00000492403 ZNF132P52740 706 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 GFRA1P56159 465 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 RNASE9P60153 205 aaKnown RBP10.63□□□□□ -0.71
EPHB4-208ENST00000492403 CAV1Q03135 178 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 CSTF1Q05048 431 aaKnown RBP10.63□□□□□ -0.71
EPHB4-208ENST00000492403 AUHQ13825 339 aaKnown RBP10.63□□□□□ -0.71
EPHB4-208ENST00000492403 SLBPQ14493 270 aaKnown RBP eCLIP10.63□□□□□ -0.71
EPHB4-208ENST00000492403 SF1Q15637 639 aaKnown RBP10.63□□□□□ -0.71
EPHB4-208ENST00000492403 LRRC38Q5VT99 294 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 GTF2IRD2BQ6EKJ0 949 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 TANGO2Q6ICL3 276 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 JADE1Q6IE81 842 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 DNAJC24Q6P3W2 148 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 DCUN1D2Q6PH85 259 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 LRIG3Q6UXM1 1119 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 GTF2IRD2Q86UP8 949 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 ERICH1Q86X53 443 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 RCOR2Q8IZ40 523 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 ARHGEF39Q8N4T4 335 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 GALNT11Q8NCW6 608 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 OR5B17Q8NGF7 314 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 ZSCAN18Q8TBC5 510 aaPredicted RBP10.63□□□□□ -0.71
EPHB4-208ENST00000492403 DEPDC1BQ8WUY9 529 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 DNASE1L2Q92874 299 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 SMARCD2Q92925 531 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 MAGOHBQ96A72 148 aaKnown RBP10.63□□□□□ -0.71
EPHB4-208ENST00000492403 RBM41Q96IZ5 413 aaKnown RBP10.63□□□□□ -0.71
EPHB4-208ENST00000492403 ZNF560Q96MR9 790 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 UBXN6Q9BZV1 441 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 SYNCQ9H7C4 482 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 LTB4R2Q9NPC1 389 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 PSD3Q9NYI0 1048 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 NCDNQ9UBB6 729 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 ASB3Q9Y575 518 aa10.63□□□□□ -0.71
EPHB4-208ENST00000492403 M0QZQ0 153 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 SHOXO15266 292 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 FAM189A1O60320 539 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 ADAM11O75078 769 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 OAZ2O95190 189 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 SEC24AO95486 1093 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 SNRPB2P08579 225 aaKnown RBP10.62□□□□□ -0.71
EPHB4-208ENST00000492403 SP9P0CG40 484 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 TYMPP19971 482 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 CD72P21854 359 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 IGFBP6P24592 240 aaPredicted RBP10.62□□□□□ -0.71
EPHB4-208ENST00000492403 TAF6P49848 677 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 EIF3BP55884 814 aaKnown RBP10.62□□□□□ -0.71
EPHB4-208ENST00000492403 MYL6P60660 151 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 RNF4P78317 190 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 DUSP4Q13115 394 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 MMRN1Q13201 1228 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 GPR17Q13304 367 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 ACAP1Q15027 740 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 SETDB1Q15047 1291 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 HADHQ16836 314 aaKnown RBP10.62□□□□□ -0.71
EPHB4-208ENST00000492403 SLC5A9Q2M3M2 681 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 MGAT5BQ3V5L5 792 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 FAM78AQ5JUQ0 283 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 EXOSC6Q5RKV6 272 aaKnown RBP10.62□□□□□ -0.71
EPHB4-208ENST00000492403 LMBRD2Q68DH5 695 aaPredicted RBP10.62□□□□□ -0.71
EPHB4-208ENST00000492403 ZCCHC8Q6NZY4 707 aaKnown RBP10.62□□□□□ -0.71
EPHB4-208ENST00000492403 C1orf228Q6PIY5 440 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 CD300LGQ6UXG3 332 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 DCP1BQ8IZD4 617 aaKnown RBP10.62□□□□□ -0.71
EPHB4-208ENST00000492403 C1orf131Q8NDD1 294 aaKnown RBP10.62□□□□□ -0.71
EPHB4-208ENST00000492403 IPO4Q8TEX9 1081 aaKnown RBP10.62□□□□□ -0.71
EPHB4-208ENST00000492403 ZNF606Q8WXB4 792 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 CPA5Q8WXQ8 436 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 SENP8Q96LD8 212 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 CCDC140Q96MF4 163 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 FANCD2OSQ96PS1 177 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 SEPT5Q99719 369 aaPredicted RBP10.62□□□□□ -0.71
EPHB4-208ENST00000492403 ERP44Q9BS26 406 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 AP1M1Q9BXS5 423 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 FRMD8P1Q9BZ68 369 aaPredicted RBP10.62□□□□□ -0.71
EPHB4-208ENST00000492403 HAPLN2Q9GZV7 340 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 ATXN3LQ9H3M9 355 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 HEBP1Q9NRV9 189 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 THG1LQ9NWX6 298 aaKnown RBP10.62□□□□□ -0.71
EPHB4-208ENST00000492403 DPP3Q9NY33 737 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 PCYOX1Q9UHG3 505 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 FBXO4Q9UKT5 387 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 HPCAL4Q9UM19 191 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 TRAF6Q9Y4K3 522 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 YIPF1Q9Y548 306 aa10.62□□□□□ -0.71
EPHB4-208ENST00000492403 PDCD11Q14690 1871 aaKnown RBP10.61□□□□□ -0.71
EPHB4-208ENST00000492403 TRIOO75962 3097 aa10.61□□□□□ -0.71
EPHB4-208ENST00000492403 CYB561D2O14569 222 aa10.61□□□□□ -0.71
EPHB4-208ENST00000492403 ABLIM1O14639 778 aa10.61□□□□□ -0.71
EPHB4-208ENST00000492403 TM4SF5O14894 197 aa10.61□□□□□ -0.71
EPHB4-208ENST00000492403 POLR3GO15318 223 aaPredicted RBP10.61□□□□□ -0.71
EPHB4-208ENST00000492403 RAD51CO43502 376 aa10.61□□□□□ -0.71
EPHB4-208ENST00000492403 HUS1O60921 280 aa10.61□□□□□ -0.71
EPHB4-208ENST00000492403 TJP3O95049 919 aa10.61□□□□□ -0.71
EPHB4-208ENST00000492403 CRTAMO95727 393 aa10.61□□□□□ -0.71
EPHB4-208ENST00000492403 GLI1P08151 1106 aa10.61□□□□□ -0.71
EPHB4-208ENST00000492403 OR4Q2P0C623 313 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms