RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 MYLKQ15746 1914 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 ATRXP46100 2492 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 SYNJ2BP-COX16A0A087WUM0 186 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 TBC1D3DA0A087WVF3 549 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 TBC1D3IA0A087WXS9 549 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 TBC1D3EA0A087X179 549 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 TBC1D3KA0A087X1G2 549 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 TCRBV5S1A1TA0A578 114 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 TBC1D3FA6NER0 549 aaPredicted RBP8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 FAM47DPA6NHR8 397 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 TBC1D3LB9A6J9 549 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 K7ERQ8 282 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 RNF103O00237 685 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 EPHB6O15197 1021 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 SMAD6O43541 496 aaKnown RBP8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 SNAP91O60641 907 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 RNGTTO60942 597 aaKnown RBP8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 RTN2O75298 545 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 MMEP08473 750 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 C1SP09871 688 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 TBC1D3HP0C7X1 549 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 UNGP13051 313 aaPredicted RBP8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 CHRNA3P32297 505 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 GGCXP38435 758 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 SULT1E1P49888 294 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 C21orf59P57076 290 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 RNASE9P60153 205 aaKnown RBP8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 KRT83P78385 493 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 FMO1Q01740 532 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 DEUP1Q05D60 604 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 SCAPQ12770 1279 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 CNTN1Q12860 1018 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 ACAP1Q15027 740 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 KRT31Q15323 416 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 C6orf118Q5T5N4 469 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 TBC1D3GQ6DHY5 549 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 TBC1D3CQ6IPX1 549 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 Q6ZVU0 165 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 TBC1D3Q8IZP1 549 aaPredicted RBP8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 CACTIN-AS1Q8N1I8 211 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 PIP4K2CQ8TBX8 421 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 CPA5Q8WXQ8 436 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 SERAC1Q96JX3 654 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 HDAC8Q9BY41 377 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 CEP44Q9C0F1 390 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 OSBPL2Q9H1P3 480 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 HSD3B7Q9H2F3 369 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 TMPRSS4Q9NRS4 437 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 MPP6Q9NZW5 540 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 COX16Q9P0S2 106 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 SLC25A13Q9UJS0 675 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 NEU3Q9UQ49 428 aa8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 TDRD6O60522 2096 aaKnown RBP8.58□□□□□ -1.04
SMARCB1-207ENST00000491967 ITPR1Q14643 2758 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 C2CD4BA6NLJ0 364 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 E9PAM4 449 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 C1QTNF3-AMACRE9PGA6 284 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 PLK4O00444 970 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 RHOCP08134 193 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 CDK4P11802 303 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 ZNF18P17022 549 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 EPHA8P29322 1005 aaPredicted RBP8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 ADRA1BP35368 520 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 SOX5P35711 763 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 PTPN9P43378 593 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 ZNF284Q2VY69 593 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 CCDC14Q49A88 953 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 ACCSLQ4AC99 568 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 TMEM259Q4ZIN3 620 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 C2CD6Q53TS8 623 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 HSP90AA4PQ58FG1 418 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 PRAMEF14Q5SWL7 426 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 FAM102AQ5T9C2 384 aaPredicted RBP8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 TAF3Q5VWG9 929 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 NAA35Q5VZE5 725 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 LRRC31Q6UY01 552 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 TRIM72Q6ZMU5 477 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 APTXQ7Z2E3 356 aaKnown RBP8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 PRPF39Q86UA1 669 aaKnown RBP8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 NLRP14Q86W24 1093 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 TMPRSS12Q86WS5 348 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 PHF13Q86YI8 300 aaPredicted RBP8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 GALNT15Q8N3T1 639 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 OXR1Q8N573 874 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 GPT2Q8TD30 523 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 SLC20A1Q8WUM9 679 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 ISG20Q96AZ6 181 aaKnown RBP8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 ARRDC3Q96B67 414 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 CFAP57Q96MR6 1250 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 PCDHB18PQ96TA0 734 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 MUC3BQ9H195 1237 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 GDF3Q9NR23 364 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 GPR27Q9NS67 375 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 FANCLQ9NW38 375 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 LIMA1Q9UHB6 759 aaKnown RBP8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 SNX10Q9Y5X0 201 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 WASF2Q9Y6W5 498 aa8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 FASNP49327 2511 aaKnown RBP8.57□□□□□ -1.04
SMARCB1-207ENST00000491967 PRAMEF26H0Y7S4 382 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 MAGEC1O60732 1142 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms