RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 SLC39A8Q9C0K1 460 aa10.95□□□□□ -0.66
USP4-214ENST00000491791 IQCGQ9H095 443 aaKnown RBP10.95□□□□□ -0.66
USP4-214ENST00000491791 LRMDAQ9H2I8 198 aa10.95□□□□□ -0.66
USP4-214ENST00000491791 MTIF3Q9H2K0 278 aaKnown RBP10.95□□□□□ -0.66
USP4-214ENST00000491791 KCNK13Q9HB14 408 aa10.95□□□□□ -0.66
USP4-214ENST00000491791 GLOD4Q9HC38 313 aa10.95□□□□□ -0.66
USP4-214ENST00000491791 ENTPD7Q9NQZ7 604 aa10.95□□□□□ -0.66
USP4-214ENST00000491791 TXLNGQ9NUQ3 528 aa10.95□□□□□ -0.66
USP4-214ENST00000491791 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.95□□□□□ -0.66
USP4-214ENST00000491791 TMEM248Q9NWD8 314 aa10.95□□□□□ -0.66
USP4-214ENST00000491791 MARCH5Q9NX47 278 aa10.95□□□□□ -0.66
USP4-214ENST00000491791 KCNK4Q9NYG8 393 aa10.95□□□□□ -0.66
USP4-214ENST00000491791 SEPT10Q9P0V9 454 aa10.95□□□□□ -0.66
USP4-214ENST00000491791 HSFX1Q9UBD0 423 aa10.95□□□□□ -0.66
USP4-214ENST00000491791 LNPEPQ9UIQ6 1025 aa10.95□□□□□ -0.66
USP4-214ENST00000491791 RPL26L1Q9UNX3 145 aaKnown RBP10.95□□□□□ -0.66
USP4-214ENST00000491791 PCDHB7Q9Y5E2 793 aa10.95□□□□□ -0.66
USP4-214ENST00000491791 HS3ST4Q9Y661 456 aa10.95□□□□□ -0.66
USP4-214ENST00000491791 RPS6KL1Q9Y6S9 549 aa10.95□□□□□ -0.66
USP4-214ENST00000491791 CDH23Q9H251 3354 aa10.95□□□□□ -0.66
USP4-214ENST00000491791 VWA8A3KMH1 1905 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 E9PAM4 449 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 PEX11BO96011 259 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 ALDOAP04075 364 aaKnown RBP10.94□□□□□ -0.66
USP4-214ENST00000491791 MPOP05164 745 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 YWHAQP27348 245 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 SPRP35270 261 aaPredicted RBP10.94□□□□□ -0.66
USP4-214ENST00000491791 OR1G1P47890 313 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 PGFP49763 221 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 TUBP50607 506 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 GEMP55040 296 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 KRT72Q14CN4 511 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 CTXN3Q4LDR2 81 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 PCID2Q5JVF3 399 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 TEDDM1Q5T9Z0 273 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 MROH9Q5TGP6 573 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 PDPK2PQ6A1A2 396 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 DENND5AQ6IQ26 1287 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 CYB5D1Q6P9G0 228 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 POTEHQ6S545 545 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 RANBP10Q6VN20 620 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 NLRP9Q7RTR0 991 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 CLEC14AQ86T13 490 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 NPAS4Q8IUM7 802 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 NDUFAF2Q8N183 169 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 ATPAF2Q8N5M1 289 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 TEX26Q8N6G2 289 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 OVCA2Q8WZ82 227 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 ATP2A3Q93084 1043 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 TADA1Q96BN2 335 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 BTN2A3PQ96KV6 586 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 CDK5RAP1Q96SZ6 601 aaKnown RBP10.94□□□□□ -0.66
USP4-214ENST00000491791 RBBP8Q99708 897 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 TRIM56Q9BRZ2 755 aaKnown RBP10.94□□□□□ -0.66
USP4-214ENST00000491791 MYLK2Q9H1R3 596 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 ZNF576Q9H609 170 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 NOL6Q9H6R4 1146 aaKnown RBP10.94□□□□□ -0.66
USP4-214ENST00000491791 TLE6Q9H808 572 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 ECT2Q9H8V3 914 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 ATP13A1Q9HD20 1204 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 VPS45Q9NRW7 570 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 KLC4Q9NSK0 619 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.94□□□□□ -0.66
USP4-214ENST00000491791 ZNF212Q9UDV6 495 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 DNAJB4Q9UDY4 337 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 TBX21Q9UL17 535 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 SNX10Q9Y5X0 201 aa10.94□□□□□ -0.66
USP4-214ENST00000491791 TTC3P53804 2025 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 TIMM44O43615 452 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 PLIN3O60664 434 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 VNN2O95498 520 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 PRKCGP05129 697 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 HAPLN1P10915 354 aaPredicted RBP10.93□□□□□ -0.66
USP4-214ENST00000491791 NQO1P15559 274 aaKnown RBP10.93□□□□□ -0.66
USP4-214ENST00000491791 BGNP21810 368 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 GRK2P25098 689 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 RASSF2P50749 326 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 TBX4P57082 545 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 YBEYP58557 167 aaPredicted RBP10.93□□□□□ -0.66
USP4-214ENST00000491791 RPL10AP62906 217 aaKnown RBP10.93□□□□□ -0.66
USP4-214ENST00000491791 ELF3P78545 371 aaPredicted RBP10.93□□□□□ -0.66
USP4-214ENST00000491791 MPP3Q13368 585 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 BMPR2Q13873 1038 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 PDE1CQ14123 709 aaPredicted RBP10.93□□□□□ -0.66
USP4-214ENST00000491791 GRIN2CQ14957 1233 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 SLC14A2Q15849 920 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 CTC1Q2NKJ3 1217 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 CCDC153Q494R4 210 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 TJAP1Q5JTD0 557 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 PIK3R6Q5UE93 754 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 FAM171A1Q5VUB5 890 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 FBXW10Q5XX13 1052 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 CASC4Q6P4E1 433 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 PKN3Q6P5Z2 889 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 KLHDC10Q6PID8 442 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 ANKS3Q6ZW76 656 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 GALNT7Q86SF2 657 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 RNF168Q8IYW5 571 aaPredicted RBP10.93□□□□□ -0.66
USP4-214ENST00000491791 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.93□□□□□ -0.66
USP4-214ENST00000491791 ATP6V0D2Q8N8Y2 350 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms