RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 DZANK1Q9NVP4 752 aa23.27■■□□□ 1.32
USF3-203ENST00000491165 TCRBV7S3A2A0A539 114 aa23.27■■□□□ 1.32
USF3-203ENST00000491165 APOC4-APOC2K7ER74 178 aa23.27■■□□□ 1.32
USF3-203ENST00000491165 APOC2P02655 101 aa23.27■■□□□ 1.32
USF3-203ENST00000491165 POU2F2P09086 479 aa23.27■■□□□ 1.32
USF3-203ENST00000491165 TROVE2P10155 538 aaKnown RBP eCLIP23.27■■□□□ 1.32
USF3-203ENST00000491165 PCK1P35558 622 aa23.27■■□□□ 1.32
USF3-203ENST00000491165 EIF3EP60228 445 aaKnown RBP23.27■■□□□ 1.32
USF3-203ENST00000491165 CRYMQ14894 314 aa23.27■■□□□ 1.32
USF3-203ENST00000491165 TEAD2Q15562 447 aa23.27■■□□□ 1.32
USF3-203ENST00000491165 EP400NLQ6ZTU2 488 aa23.27■■□□□ 1.32
USF3-203ENST00000491165 NLRP9Q7RTR0 991 aa23.27■■□□□ 1.32
USF3-203ENST00000491165 TAB3Q8N5C8 712 aaPredicted RBP23.27■■□□□ 1.32
USF3-203ENST00000491165 ARL14EPQ8N8R7 260 aaPredicted RBP23.27■■□□□ 1.32
USF3-203ENST00000491165 BANPQ8N9N5 519 aa23.27■■□□□ 1.32
USF3-203ENST00000491165 ITFG1Q8TB96 612 aa23.27■■□□□ 1.32
USF3-203ENST00000491165 TCP10LQ8TDR4 215 aa23.27■■□□□ 1.32
USF3-203ENST00000491165 GUCD1Q96NT3 240 aa23.27■■□□□ 1.32
USF3-203ENST00000491165 GAS2L1Q99501 681 aaPredicted RBP23.27■■□□□ 1.32
USF3-203ENST00000491165 CDX2Q99626 313 aaPredicted RBP23.27■■□□□ 1.32
USF3-203ENST00000491165 PIDD1Q9HB75 910 aa23.27■■□□□ 1.32
USF3-203ENST00000491165 NPHS2Q9NP85 383 aa23.27■■□□□ 1.32
USF3-203ENST00000491165 MARCH2Q9P0N8 246 aa23.27■■□□□ 1.32
USF3-203ENST00000491165 MCF2LO15068 1137 aa23.26■■□□□ 1.31
USF3-203ENST00000491165 T-ENOLP0DO92 83 aa23.26■■□□□ 1.31
USF3-203ENST00000491165 PPP3CCP48454 512 aa23.26■■□□□ 1.31
USF3-203ENST00000491165 TUBP50607 506 aa23.26■■□□□ 1.31
USF3-203ENST00000491165 ZNF449Q6P9G9 518 aa23.26■■□□□ 1.31
USF3-203ENST00000491165 ZNF276Q8N554 614 aa23.26■■□□□ 1.31
USF3-203ENST00000491165 FAM71DQ8N9W8 422 aa23.26■■□□□ 1.31
USF3-203ENST00000491165 ING5Q8WYH8 240 aa23.26■■□□□ 1.31
USF3-203ENST00000491165 ZFRQ96KR1 1074 aaKnown RBP23.26■■□□□ 1.31
USF3-203ENST00000491165 SLC46A2Q9BY10 475 aa23.26■■□□□ 1.31
USF3-203ENST00000491165 GPATCH2LQ9NWQ4 482 aa23.26■■□□□ 1.31
USF3-203ENST00000491165 ZFP69BQ9UJL9 534 aa23.26■■□□□ 1.31
USF3-203ENST00000491165 PIAS1O75925 651 aa23.26■■□□□ 1.31
USF3-203ENST00000491165 OLFM2O95897 454 aa23.26■■□□□ 1.31
USF3-203ENST00000491165 CDC25CP30307 473 aa23.26■■□□□ 1.31
USF3-203ENST00000491165 ATP5C1P36542 298 aaKnown RBP23.26■■□□□ 1.31
USF3-203ENST00000491165 HELZP42694 1942 aaKnown RBP23.26■■□□□ 1.31
USF3-203ENST00000491165 BASP1P80723 227 aaKnown RBP23.26■■□□□ 1.31
USF3-203ENST00000491165 CBX2Q14781 532 aaPredicted RBP23.26■■□□□ 1.31
USF3-203ENST00000491165 COL19A1Q14993 1142 aa23.26■■□□□ 1.31
USF3-203ENST00000491165 CA9Q16790 459 aa23.26■■□□□ 1.31
USF3-203ENST00000491165 TAF1BQ53T94 588 aaPredicted RBP23.26■■□□□ 1.31
USF3-203ENST00000491165 ELMSAN1Q6PJG2 1045 aa23.26■■□□□ 1.31
USF3-203ENST00000491165 WBP2Q969T9 261 aa23.26■■□□□ 1.31
USF3-203ENST00000491165 SLC7A6OSQ96CW6 309 aaPredicted RBP23.26■■□□□ 1.31
USF3-203ENST00000491165 VPS11Q9H270 941 aa23.26■■□□□ 1.31
USF3-203ENST00000491165 GKN1Q9NS71 199 aa23.26■■□□□ 1.31
USF3-203ENST00000491165 RRN3Q9NYV6 651 aa23.26■■□□□ 1.31
USF3-203ENST00000491165 WDR91A4D1P6 747 aa23.25■■□□□ 1.31
USF3-203ENST00000491165 HMBSP08397 361 aa23.25■■□□□ 1.31
USF3-203ENST00000491165 CEBPBP17676 345 aa23.25■■□□□ 1.31
USF3-203ENST00000491165 CXCR3P49682 368 aa23.25■■□□□ 1.31
USF3-203ENST00000491165 NAA25Q14CX7 972 aa23.25■■□□□ 1.31
USF3-203ENST00000491165 GPR149Q86SP6 731 aa23.25■■□□□ 1.31
USF3-203ENST00000491165 HSPH1Q92598 858 aa23.25■■□□□ 1.31
USF3-203ENST00000491165 SLC39A13Q96H72 371 aa23.25■■□□□ 1.31
USF3-203ENST00000491165 ZSWIM3Q96MP5 696 aa23.25■■□□□ 1.31
USF3-203ENST00000491165 CYTH2Q99418 400 aa23.25■■□□□ 1.31
USF3-203ENST00000491165 SMG9Q9H0W8 520 aaKnown RBP23.25■■□□□ 1.31
USF3-203ENST00000491165 S1PR5Q9H228 398 aa23.25■■□□□ 1.31
USF3-203ENST00000491165 CBX6O95503 412 aa23.24■■□□□ 1.31
USF3-203ENST00000491165 RBP3P10745 1247 aa23.24■■□□□ 1.31
USF3-203ENST00000491165 KCNQ1P51787 676 aa23.24■■□□□ 1.31
USF3-203ENST00000491165 CCNG1P51959 295 aa23.24■■□□□ 1.31
USF3-203ENST00000491165 DPYSL3Q14195 570 aa23.24■■□□□ 1.31
USF3-203ENST00000491165 CCDC85BQ15834 202 aaPredicted RBP23.24■■□□□ 1.31
USF3-203ENST00000491165 KLHDC10Q6PID8 442 aa23.24■■□□□ 1.31
USF3-203ENST00000491165 MRPS31Q92665 395 aaKnown RBP23.24■■□□□ 1.31
USF3-203ENST00000491165 MIEF2Q96C03 454 aa23.24■■□□□ 1.31
USF3-203ENST00000491165 FCRL2Q96LA5 508 aaPredicted RBP23.24■■□□□ 1.31
USF3-203ENST00000491165 ZNF570Q96NI8 536 aa23.24■■□□□ 1.31
USF3-203ENST00000491165 SERPINB11Q96P15 392 aa23.24■■□□□ 1.31
USF3-203ENST00000491165 SNRNP25Q9BV90 132 aaKnown RBP23.24■■□□□ 1.31
USF3-203ENST00000491165 TBC1D10AQ9BXI6 508 aa23.24■■□□□ 1.31
USF3-203ENST00000491165 OLA1Q9NTK5 396 aaKnown RBP23.24■■□□□ 1.31
USF3-203ENST00000491165 SMPD4Q9NXE4 827 aa23.24■■□□□ 1.31
USF3-203ENST00000491165 DNMT3LQ9UJW3 386 aa23.24■■□□□ 1.31
USF3-203ENST00000491165 DOCK8Q8NF50 2099 aa23.24■■□□□ 1.31
USF3-203ENST00000491165 SLC12A8A0AV02 714 aa23.24■■□□□ 1.31
USF3-203ENST00000491165 GOLGA8RI6L899 631 aa23.24■■□□□ 1.31
USF3-203ENST00000491165 TRAFD1O14545 582 aaPredicted RBP23.24■■□□□ 1.31
USF3-203ENST00000491165 MTM1Q13496 603 aa23.24■■□□□ 1.31
USF3-203ENST00000491165 LONP2Q86WA8 852 aa23.24■■□□□ 1.31
USF3-203ENST00000491165 PYROXD2Q8N2H3 581 aa23.24■■□□□ 1.31
USF3-203ENST00000491165 CALN1Q9BXU9 219 aa23.24■■□□□ 1.31
USF3-203ENST00000491165 MANSC1Q9H8J5 431 aa23.24■■□□□ 1.31
USF3-203ENST00000491165 SAR1AQ9NR31 198 aa23.24■■□□□ 1.31
USF3-203ENST00000491165 SLC17A7Q9P2U7 560 aa23.24■■□□□ 1.31
USF3-203ENST00000491165 CHMP2BQ9UQN3 213 aa23.24■■□□□ 1.31
USF3-203ENST00000491165 TLR6Q9Y2C9 796 aa23.24■■□□□ 1.31
USF3-203ENST00000491165 IQANK1A0A1B0GTG1 560 aa23.23■■□□□ 1.31
USF3-203ENST00000491165 PRPSAP2O60256 369 aa23.23■■□□□ 1.31
USF3-203ENST00000491165 MT-ND3P03897 115 aa23.23■■□□□ 1.31
USF3-203ENST00000491165 HDCP19113 662 aa23.23■■□□□ 1.31
USF3-203ENST00000491165 ANKRD20A2Q5SQ80 823 aa23.23■■□□□ 1.31
USF3-203ENST00000491165 GPR158Q5T848 1215 aa23.23■■□□□ 1.31
USF3-203ENST00000491165 ANKRD20A1Q5TYW2 823 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms