RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 YBEYP58557 167 aaPredicted RBP7.47□□□□□ -1.21
NPHP3-208ENST00000490993 GPX6P59796 221 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 CRADDP78560 199 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 BST1Q10588 318 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 SCUBE1Q8IWY4 988 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 DDIASQ8IXT1 998 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 GLIS1Q8NBF1 620 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 PCYOX1LQ8NBM8 494 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 MYCBPQ99417 103 aaPredicted RBP7.47□□□□□ -1.21
NPHP3-208ENST00000490993 SARS2Q9NP81 518 aaKnown RBP7.47□□□□□ -1.21
NPHP3-208ENST00000490993 BATF3Q9NR55 127 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 HACD3Q9P035 362 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 SLC17A7Q9P2U7 560 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 STK39Q9UEW8 545 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 TRMT6Q9UJA5 497 aaKnown RBP7.47□□□□□ -1.21
NPHP3-208ENST00000490993 SUPT3HB4E1H0 165 aa7.46□□□□□ -1.21
NPHP3-208ENST00000490993 NEMP1O14524 444 aa7.46□□□□□ -1.21
NPHP3-208ENST00000490993 ZBTB24O43167 697 aaPredicted RBP7.46□□□□□ -1.21
NPHP3-208ENST00000490993 SUPT3HO75486 399 aa7.46□□□□□ -1.21
NPHP3-208ENST00000490993 KRT16P08779 473 aa7.46□□□□□ -1.21
NPHP3-208ENST00000490993 POU4F1Q01851 419 aa7.46□□□□□ -1.21
NPHP3-208ENST00000490993 DDR2Q16832 855 aa7.46□□□□□ -1.21
NPHP3-208ENST00000490993 SYPL2Q5VXT5 272 aa7.46□□□□□ -1.21
NPHP3-208ENST00000490993 RAP1GAP2Q684P5 730 aa7.46□□□□□ -1.21
NPHP3-208ENST00000490993 RETSATQ6NUM9 610 aa7.46□□□□□ -1.21
NPHP3-208ENST00000490993 RGS9BPQ6ZS82 235 aa7.46□□□□□ -1.21
NPHP3-208ENST00000490993 ZDHHC14Q8IZN3 488 aa7.46□□□□□ -1.21
NPHP3-208ENST00000490993 RTL3Q8N8U3 475 aaKnown RBP7.46□□□□□ -1.21
NPHP3-208ENST00000490993 GIPC2Q8TF65 315 aa7.46□□□□□ -1.21
NPHP3-208ENST00000490993 RTP4Q96DX8 246 aa7.46□□□□□ -1.21
NPHP3-208ENST00000490993 TEKT5Q96M29 485 aa7.46□□□□□ -1.21
NPHP3-208ENST00000490993 ATP13A1Q9HD20 1204 aa7.46□□□□□ -1.21
NPHP3-208ENST00000490993 NDFIP2Q9NV92 336 aa7.46□□□□□ -1.21
NPHP3-208ENST00000490993 SRRDQ9UH36 339 aa7.46□□□□□ -1.21
NPHP3-208ENST00000490993 SFMBT1Q9UHJ3 866 aa7.46□□□□□ -1.21
NPHP3-208ENST00000490993 L3MBTL1Q9Y468 752 aa7.46□□□□□ -1.21
NPHP3-208ENST00000490993 IRAK2O43187 625 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 METTL18O95568 372 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 CXCR3P49682 368 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 ATXN1P54253 815 aaKnown RBP7.46□□□□□ -1.22
NPHP3-208ENST00000490993 TRIP4Q15650 581 aaPredicted RBP7.46□□□□□ -1.22
NPHP3-208ENST00000490993 TRMT5Q32P41 509 aaKnown RBP7.46□□□□□ -1.22
NPHP3-208ENST00000490993 ACCSLQ4AC99 568 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 ZRANB3Q5FWF4 1079 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 STXBP5Q5T5C0 1151 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 MRPL10Q7Z7H8 261 aaKnown RBP7.46□□□□□ -1.22
NPHP3-208ENST00000490993 KBTBD7Q8WVZ9 684 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 CENPIQ92674 756 aaPredicted RBP7.46□□□□□ -1.22
NPHP3-208ENST00000490993 N4BP2L2Q92802 583 aaPredicted RBP7.46□□□□□ -1.22
NPHP3-208ENST00000490993 ZNF558Q96NG5 402 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 TMEM106CQ9BVX2 250 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 RHOJQ9H4E5 214 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 SNX15Q9NRS6 342 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 PIGVQ9NUD9 493 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 RIC8BQ9NVN3 520 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 TMCO1Q9UM00 188 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 SOX13Q9UN79 622 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 TRIM17Q9Y577 477 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.46□□□□□ -1.22
NPHP3-208ENST00000490993 CCDC160A6NGH7 325 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 NOL3O60936 208 aaKnown RBP7.46□□□□□ -1.22
NPHP3-208ENST00000490993 CYBAP13498 195 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 HLA-DPA1P20036 260 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 GRK4P32298 578 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 MAPKAPK2P49137 400 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 RHOAP61586 193 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 BNIP1Q12981 228 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 MOGSQ13724 837 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 UPP1Q16831 310 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 UBXN11Q5T124 520 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 ARMC3Q5W041 872 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 SAPCD2Q86UD0 394 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 CARNMT1Q8N4J0 409 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 SLC26A7Q8TE54 656 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 SMOQ99835 787 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 EGFL8Q99944 293 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 TCF7L2Q9NQB0 619 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 TRMT13Q9NUP7 481 aaKnown RBP7.46□□□□□ -1.22
NPHP3-208ENST00000490993 ADA2Q9NZK5 511 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 VPS28Q9UK41 221 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 TLR6Q9Y2C9 796 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 HBS1LQ9Y450 684 aaKnown RBP7.46□□□□□ -1.22
NPHP3-208ENST00000490993 TCRBV7S3A2A0A539 114 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 FAM159BA6NKW6 160 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 C9IYK1 514 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 BNIP3LO60238 219 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 FGF1P05230 155 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 VHLP40337 213 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 RAB10P61026 200 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 CSHL1Q14406 222 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 PRKD1Q15139 912 aaPredicted RBP7.46□□□□□ -1.22
NPHP3-208ENST00000490993 ZNF618Q5T7W0 954 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 PTRHD1Q6GMV3 140 aaKnown RBP7.46□□□□□ -1.22
NPHP3-208ENST00000490993 FAM45BPQ6NSW5 357 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 ALKAL1Q6UXT8 129 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 PTAR1Q7Z6K3 402 aaPredicted RBP7.46□□□□□ -1.22
NPHP3-208ENST00000490993 DEFB128Q7Z7B8 93 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 METTL3Q86U44 580 aaKnown RBP7.46□□□□□ -1.22
NPHP3-208ENST00000490993 PACS2Q86VP3 889 aa7.46□□□□□ -1.22
NPHP3-208ENST00000490993 NPAS4Q8IUM7 802 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms