RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 APC2O95996 2303 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 PLXNB3Q9ULL4 1909 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 CXorf51AA0A1B0GTR3 108 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 GOLGA8SH3BPF8 625 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 MCF2LO15068 1137 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 SKILP12757 684 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 UNGP13051 313 aaPredicted RBP10.63□□□□□ -0.71
TTC28-207ENST00000490475 CTSOP43234 321 aaPredicted RBP10.63□□□□□ -0.71
TTC28-207ENST00000490475 RXRGP48443 463 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 NME3Q13232 169 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 ILKQ13418 452 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 AUHQ13825 339 aaKnown RBP10.63□□□□□ -0.71
TTC28-207ENST00000490475 SMAD1Q15797 465 aaKnown RBP10.63□□□□□ -0.71
TTC28-207ENST00000490475 CLEC16AQ2KHT3 1053 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 C5orf22Q49AR2 442 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 ACCSLQ4AC99 568 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 SETMARQ53H47 684 aaPredicted RBP10.63□□□□□ -0.71
TTC28-207ENST00000490475 SFMBT2Q5VUG0 894 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 E4F1Q66K89 784 aaPredicted RBP10.63□□□□□ -0.71
TTC28-207ENST00000490475 CXorf57Q6NSI4 855 aaKnown RBP10.63□□□□□ -0.71
TTC28-207ENST00000490475 MMS22LQ6ZRQ5 1243 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 ZSCAN30Q86W11 494 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 TRIM69Q86WT6 500 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 XYLT1Q86Y38 959 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 PDCD7Q8N8D1 485 aaKnown RBP10.63□□□□□ -0.71
TTC28-207ENST00000490475 FAM131CQ96AQ9 280 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 C1orf74Q96LT6 269 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 ORAI3Q9BRQ5 295 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 FEM1AQ9BSK4 669 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 EDEM3Q9BZQ6 932 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 MUC3BQ9H195 1237 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 RETREG1Q9H6L5 497 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 PREBQ9HCU5 417 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 DYRK4Q9NR20 520 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 SEPT11Q9NVA2 429 aaKnown RBP10.63□□□□□ -0.71
TTC28-207ENST00000490475 TOR4AQ9NXH8 423 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.63□□□□□ -0.71
TTC28-207ENST00000490475 AIPL1Q9NZN9 384 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 XPO7Q9UIA9 1087 aaKnown RBP10.63□□□□□ -0.71
TTC28-207ENST00000490475 MYO6Q9UM54 1294 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 LHX6Q9UPM6 363 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 HS3ST2Q9Y278 367 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 TBC1D30Q9Y2I9 924 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 ATRXP46100 2492 aa10.63□□□□□ -0.71
TTC28-207ENST00000490475 URB1O60287 2271 aaKnown RBP10.63□□□□□ -0.71
TTC28-207ENST00000490475 DSPP15924 2871 aaKnown RBP10.63□□□□□ -0.71
TTC28-207ENST00000490475 PLXNA2O75051 1894 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 SYNJ2BP-COX16A0A087WUM0 186 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 C10orf142B7Z368 130 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 PRAMEF26H0Y7S4 382 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 M0QYT0 321 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 TLR4O00206 839 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 PLRG1O43660 514 aaKnown RBP10.62□□□□□ -0.71
TTC28-207ENST00000490475 LDOC1O95751 146 aaPredicted RBP10.62□□□□□ -0.71
TTC28-207ENST00000490475 PRNPP04156 253 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 CAPNS1P04632 268 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 ATXN1LP0C7T5 689 aaKnown RBP10.62□□□□□ -0.71
TTC28-207ENST00000490475 CCDC172P0C7W6 258 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 TNFAIP3P21580 790 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 MMP8P22894 467 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 ETFBP38117 255 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 RECQLP46063 649 aaPredicted RBP10.62□□□□□ -0.71
TTC28-207ENST00000490475 SLC20A2Q08357 652 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 STAT4Q14765 748 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 DLG2Q15700 870 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 ASIC2Q16515 512 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 FIGNQ5HY92 759 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 C6orf118Q5T5N4 469 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.62□□□□□ -0.71
TTC28-207ENST00000490475 ZNF783Q6ZMS7 281 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 ARCQ7LC44 396 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 ZNF571Q7Z3V5 609 aaPredicted RBP10.62□□□□□ -0.71
TTC28-207ENST00000490475 GAS2L3Q86XJ1 694 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 SH2D3CQ8N5H7 860 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 AADATQ8N5Z0 425 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 FRS2Q8WU20 508 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 MYEOVQ96EZ4 313 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 PPP1R16AQ96I34 528 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 SLC6A18Q96N87 628 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 RBSNQ9H1K0 784 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 MTG2Q9H4K7 406 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 HAUS4Q9H6D7 363 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 SCUBE2Q9NQ36 999 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 ARHGEF38Q9NXL2 777 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 COX16Q9P0S2 106 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 SERGEFQ9UGK8 458 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 VANGL2Q9ULK5 521 aa10.62□□□□□ -0.71
TTC28-207ENST00000490475 ASPMQ8IZT6 3477 aa10.61□□□□□ -0.71
TTC28-207ENST00000490475 A0A1W2PR77 199 aa10.61□□□□□ -0.71
TTC28-207ENST00000490475 TMCO5BA8MYB1 307 aa10.61□□□□□ -0.71
TTC28-207ENST00000490475 ENC1O14682 589 aa10.61□□□□□ -0.71
TTC28-207ENST00000490475 RIOK3O14730 519 aaKnown RBP10.61□□□□□ -0.71
TTC28-207ENST00000490475 PAGE1O75459 146 aa10.61□□□□□ -0.71
TTC28-207ENST00000490475 GJB6O95452 261 aa10.61□□□□□ -0.71
TTC28-207ENST00000490475 RHOCP08134 193 aa10.61□□□□□ -0.71
TTC28-207ENST00000490475 TFE3P19532 575 aaPredicted RBP10.61□□□□□ -0.71
TTC28-207ENST00000490475 CASP14P31944 242 aa10.61□□□□□ -0.71
TTC28-207ENST00000490475 DRD3P35462 400 aa10.61□□□□□ -0.71
TTC28-207ENST00000490475 CXCR3P49682 368 aa10.61□□□□□ -0.71
TTC28-207ENST00000490475 STK19P49842 368 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms