RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 ACADMP11310 421 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 ACVRL1P37023 503 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 DPP6P42658 865 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 PXNP49023 591 aaPredicted RBP11.31□□□□□ -0.6
CPSF7-212ENST00000489728 TAS2R40P59535 323 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 SIM2Q14190 667 aaPredicted RBP11.31□□□□□ -0.6
CPSF7-212ENST00000489728 DPYSL3Q14195 570 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 DLG2Q15700 870 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 ELF2Q15723 593 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 MAP7D1Q3KQU3 841 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 LAIR1Q6GTX8 287 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 C22orf39Q6P5X5 142 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 KIAA1324Q6UXG2 1013 aaKnown RBP11.31□□□□□ -0.6
CPSF7-212ENST00000489728 USP30Q70CQ3 517 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 CEP68Q76N32 757 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 LRRC8AQ8IWT6 810 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 SUMF1Q8NBK3 374 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 KCTD6Q8NC69 237 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 TPCN2Q8NHX9 752 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 OR8D1Q8WZ84 308 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 PTPRN2Q92932 1015 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 FAM122AQ96E09 287 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 HMCESQ96FZ2 354 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 TPSD1Q9BZJ3 242 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 KLC2Q9H0B6 622 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 ITM2CQ9NQX7 267 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 FAM86C1Q9NVL1 165 aa11.31□□□□□ -0.6
CPSF7-212ENST00000489728 SMG5Q9UPR3 1016 aaKnown RBP11.31□□□□□ -0.6
CPSF7-212ENST00000489728 MCF2LO15068 1137 aa11.3□□□□□ -0.6
CPSF7-212ENST00000489728 PRAMEF11O60813 436 aa11.3□□□□□ -0.6
CPSF7-212ENST00000489728 GSRP00390 522 aa11.3□□□□□ -0.6
CPSF7-212ENST00000489728 DNTTP04053 509 aa11.3□□□□□ -0.6
CPSF7-212ENST00000489728 C5AR1P21730 350 aa11.3□□□□□ -0.6
CPSF7-212ENST00000489728 COMTP21964 271 aa11.3□□□□□ -0.6
CPSF7-212ENST00000489728 IL4RP24394 825 aa11.3□□□□□ -0.6
CPSF7-212ENST00000489728 RECQLP46063 649 aaPredicted RBP11.3□□□□□ -0.6
CPSF7-212ENST00000489728 RPS14P62263 151 aaKnown RBP11.3□□□□□ -0.6
CPSF7-212ENST00000489728 RFTN1Q14699 578 aaPredicted RBP11.3□□□□□ -0.6
CPSF7-212ENST00000489728 CST6Q15828 149 aa11.3□□□□□ -0.6
CPSF7-212ENST00000489728 ACCSLQ4AC99 568 aa11.3□□□□□ -0.6
CPSF7-212ENST00000489728 ODF2Q5BJF6 829 aa11.3□□□□□ -0.6
CPSF7-212ENST00000489728 FAM46CQ5VWP2 391 aa11.3□□□□□ -0.6
CPSF7-212ENST00000489728 ZNF662Q6ZS27 426 aa11.3□□□□□ -0.6
CPSF7-212ENST00000489728 DAAM2Q86T65 1068 aa11.3□□□□□ -0.6
CPSF7-212ENST00000489728 KBTBD6Q86V97 674 aa11.3□□□□□ -0.6
CPSF7-212ENST00000489728 ARHGAP12Q8IWW6 846 aa11.3□□□□□ -0.6
CPSF7-212ENST00000489728 RNF10Q8N5U6 811 aaKnown RBP11.3□□□□□ -0.6
CPSF7-212ENST00000489728 NPWQ8N729 165 aa11.3□□□□□ -0.6
CPSF7-212ENST00000489728 ZNF366Q8N895 744 aa11.3□□□□□ -0.6
CPSF7-212ENST00000489728 ACRBPQ8NEB7 543 aa11.3□□□□□ -0.6
CPSF7-212ENST00000489728 LRIG1Q96JA1 1093 aa11.3□□□□□ -0.6
CPSF7-212ENST00000489728 ZNF599Q96NL3 588 aa11.3□□□□□ -0.6
CPSF7-212ENST00000489728 CALN1Q9BXU9 219 aa11.3□□□□□ -0.6
CPSF7-212ENST00000489728 PDFQ9HBH1 243 aa11.3□□□□□ -0.6
CPSF7-212ENST00000489728 FZD4Q9ULV1 537 aa11.3□□□□□ -0.6
CPSF7-212ENST00000489728 TPX2Q9ULW0 747 aaKnown RBP11.3□□□□□ -0.6
CPSF7-212ENST00000489728 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.3□□□□□ -0.6
CPSF7-212ENST00000489728 ALG6Q9Y672 507 aa11.3□□□□□ -0.6
CPSF7-212ENST00000489728 IGHV1OR15-9A0A0B4J2B8 117 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 RCCD1A6NED2 376 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 PRR23AA6NEV1 266 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 C1QTNF3-AMACRE9PGA6 284 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 SLC7A4O43246 635 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 BUB1O43683 1085 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 LRP3O75074 770 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 CD160O95971 181 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 MT-CO1P00395 513 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 PRNPP04156 253 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 CCDC175P0C221 793 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 ZFXP17010 805 aaPredicted RBP11.29□□□□□ -0.6
CPSF7-212ENST00000489728 GLDCP23378 1020 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 KDELR1P24390 212 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 CD6P30203 668 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 PAPOLAP51003 745 aaKnown RBP11.29□□□□□ -0.6
CPSF7-212ENST00000489728 TPMTP51580 245 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 IL10RBQ08334 325 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 CCDC15Q0P6D6 951 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 PAFAH1B3Q15102 231 aaKnown RBP11.29□□□□□ -0.6
CPSF7-212ENST00000489728 PLK5Q496M5 336 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 ANKRD20A8PQ5CZ79 823 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 PMS2CLQ68D20 193 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 LINGO4Q6UY18 593 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 Q6ZVU0 165 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 LPCAT2Q7L5N7 544 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 ZNF354CQ86Y25 554 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 CPNE8Q86YQ8 564 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 KATNAL2Q8IYT4 538 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 SYCE1Q8N0S2 351 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 TMIEQ8NEW7 156 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 CADM4Q8NFZ8 388 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 OR2A12Q8NGT7 310 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 FATE1Q969F0 183 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 FAM131CQ96AQ9 280 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 FAM129BQ96TA1 746 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 LACRTQ9GZZ8 138 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 DUSP15Q9H1R2 295 aaPredicted RBP11.29□□□□□ -0.6
CPSF7-212ENST00000489728 PABPC3Q9H361 631 aaKnown RBP11.29□□□□□ -0.6
CPSF7-212ENST00000489728 UBA2Q9UBT2 640 aaPredicted RBP11.29□□□□□ -0.6
CPSF7-212ENST00000489728 SALL4Q9UJQ4 1053 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 PPM1HQ9ULR3 514 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms