RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 RBM15Q96T37 977 aaKnown RBP eCLIP10.01□□□□□ -0.81
NOD1-208ENST00000489614 TMEM175Q9BSA9 504 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 TMEM109Q9BVC6 243 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 HIPK3Q9H422 1215 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 CWH43Q9H720 699 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 TSPAN16Q9UKR8 245 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.01□□□□□ -0.81
NOD1-208ENST00000489614 TIMP1P01033 207 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 CLTBP09497 229 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 GLULP15104 373 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 NELFEP18615 380 aaKnown RBP10.01□□□□□ -0.81
NOD1-208ENST00000489614 CLK3P49761 638 aaKnown RBP10.01□□□□□ -0.81
NOD1-208ENST00000489614 NKX2-5P52952 324 aaPredicted RBP10.01□□□□□ -0.81
NOD1-208ENST00000489614 ORC1Q13415 861 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 HNRNPDQ14103 355 aaKnown RBP10.01□□□□□ -0.81
NOD1-208ENST00000489614 TJAP1Q5JTD0 557 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 RNF111Q6ZNA4 994 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 DHDDSQ86SQ9 333 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 APPL2Q8NEU8 664 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 OR7G1Q8NGA0 311 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 SEPT8Q92599 483 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 CCDC124Q96CT7 223 aaKnown RBP10.01□□□□□ -0.81
NOD1-208ENST00000489614 PLEKHA8Q96JA3 519 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 LPIN3Q9BQK8 851 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 ROPN1BQ9BZX4 212 aaPredicted RBP10.01□□□□□ -0.81
NOD1-208ENST00000489614 ROPN1Q9HAT0 212 aaPredicted RBP10.01□□□□□ -0.81
NOD1-208ENST00000489614 SLC7A8Q9UHI5 535 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 PCDHA3Q9Y5H8 950 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 ALG6Q9Y672 507 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 PSMD11O00231 422 aa10□□□□□ -0.81
NOD1-208ENST00000489614 CYB561D2O14569 222 aa10□□□□□ -0.81
NOD1-208ENST00000489614 ITM2AO43736 263 aa10□□□□□ -0.81
NOD1-208ENST00000489614 PROSCO94903 275 aa10□□□□□ -0.81
NOD1-208ENST00000489614 FYNP06241 537 aa10□□□□□ -0.81
NOD1-208ENST00000489614 ABCB4P21439 1286 aa10□□□□□ -0.81
NOD1-208ENST00000489614 NSFP46459 744 aaKnown RBP10□□□□□ -0.81
NOD1-208ENST00000489614 TAP1Q03518 808 aa10□□□□□ -0.81
NOD1-208ENST00000489614 PDK1Q15118 436 aa10□□□□□ -0.81
NOD1-208ENST00000489614 SIX1Q15475 284 aaPredicted RBP10□□□□□ -0.81
NOD1-208ENST00000489614 PASD1Q8IV76 773 aa10□□□□□ -0.81
NOD1-208ENST00000489614 PHF6Q8IWS0 365 aaKnown RBP eCLIP10□□□□□ -0.81
NOD1-208ENST00000489614 NATD1Q8N6N6 113 aa10□□□□□ -0.81
NOD1-208ENST00000489614 TRIML2Q8N7C3 387 aa10□□□□□ -0.81
NOD1-208ENST00000489614 ANKRD52Q8NB46 1076 aa10□□□□□ -0.81
NOD1-208ENST00000489614 ALG3Q92685 438 aa10□□□□□ -0.81
NOD1-208ENST00000489614 ITPKCQ96DU7 683 aa10□□□□□ -0.81
NOD1-208ENST00000489614 PCDH12Q9NPG4 1184 aa10□□□□□ -0.81
NOD1-208ENST00000489614 TMEM30AQ9NV96 361 aa10□□□□□ -0.81
NOD1-208ENST00000489614 KANSL3Q9P2N6 904 aa10□□□□□ -0.81
NOD1-208ENST00000489614 SCINQ9Y6U3 715 aa10□□□□□ -0.81
NOD1-208ENST00000489614 TMEM114B3SHH9 223 aa10□□□□□ -0.81
NOD1-208ENST00000489614 F8W810 466 aa10□□□□□ -0.81
NOD1-208ENST00000489614 AQP9O43315 295 aa10□□□□□ -0.81
NOD1-208ENST00000489614 PQBP1O60828 265 aaKnown RBP10□□□□□ -0.81
NOD1-208ENST00000489614 OAZ2O95190 189 aa10□□□□□ -0.81
NOD1-208ENST00000489614 PTPN7P35236 360 aa10□□□□□ -0.81
NOD1-208ENST00000489614 GNL1P36915 607 aaPredicted RBP10□□□□□ -0.81
NOD1-208ENST00000489614 SLC1A1P43005 524 aa10□□□□□ -0.81
NOD1-208ENST00000489614 LMNB2Q03252 620 aa10□□□□□ -0.81
NOD1-208ENST00000489614 RABGAP1LQ5R372 815 aa10□□□□□ -0.81
NOD1-208ENST00000489614 FAM182AQ5T1J6 154 aa10□□□□□ -0.81
NOD1-208ENST00000489614 WSCD1Q658N2 575 aa10□□□□□ -0.81
NOD1-208ENST00000489614 SIGIRRQ6IA17 410 aa10□□□□□ -0.81
NOD1-208ENST00000489614 B3GALNT2Q8NCR0 500 aa10□□□□□ -0.81
NOD1-208ENST00000489614 FEZF2Q8TBJ5 459 aa10□□□□□ -0.81
NOD1-208ENST00000489614 THAP11Q96EK4 314 aa10□□□□□ -0.81
NOD1-208ENST00000489614 B3GNT5Q9BYG0 378 aa10□□□□□ -0.81
NOD1-208ENST00000489614 WDR6Q9NNW5 1121 aaKnown RBP10□□□□□ -0.81
NOD1-208ENST00000489614 PARVAQ9NVD7 372 aa10□□□□□ -0.81
NOD1-208ENST00000489614 CDH9Q9ULB4 789 aa10□□□□□ -0.81
NOD1-208ENST00000489614 CHD5Q8TDI0 1954 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 C2CD2LO14523 706 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 PHF2O75151 1096 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 CA4P22748 312 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 SSTR3P32745 418 aaPredicted RBP9.99□□□□□ -0.81
NOD1-208ENST00000489614 LHX1P48742 406 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 ITGADQ13349 1161 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 SPARCL1Q14515 664 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 GOLGA7BQ2TAP0 167 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 PMF1Q6P1K2 205 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 ACOT1Q86TX2 421 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 CCDC105Q8IYK2 499 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 ULK2Q8IYT8 1036 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 RBM15BQ8NDT2 890 aaKnown RBP9.99□□□□□ -0.81
NOD1-208ENST00000489614 ZMIZ2Q8NF64 920 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 EXD1Q8NHP7 514 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 CALML6Q8TD86 181 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 FAM172AQ8WUF8 416 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 ATP2A3Q93084 1043 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 SCLYQ96I15 445 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 ACBD6Q9BR61 282 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 C12orf65Q9H3J6 166 aaKnown RBP9.99□□□□□ -0.81
NOD1-208ENST00000489614 THEGQ9P2T0 379 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 DOCK4Q8N1I0 1966 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 CCDC162PA2VCL2 907 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 C3orf70A6NLC5 250 aaPredicted RBP9.99□□□□□ -0.81
NOD1-208ENST00000489614 MIF4GDA9UHW6 222 aaKnown RBP9.99□□□□□ -0.81
NOD1-208ENST00000489614 PEX1O43933 1283 aa9.99□□□□□ -0.81
NOD1-208ENST00000489614 HNRNPCL1O60812 293 aaKnown RBP9.99□□□□□ -0.81
NOD1-208ENST00000489614 POMCP01189 267 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms