RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 TSHRP16473 764 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 FCARP24071 287 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 PSMB4P28070 264 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 LTBRP36941 435 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 MTHFRP42898 656 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 PMS2P54278 862 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 ARL4CP56559 192 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 GRIN2CQ14957 1233 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 UAP1Q16222 522 aaPredicted RBP13.08□□□□□ -0.32
TOP3A-206ENST00000489131 HIF1AQ16665 826 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 INO80DQ53TQ3 878 aaPredicted RBP13.08□□□□□ -0.32
TOP3A-206ENST00000489131 FAM78AQ5JUQ0 283 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 ATAT1Q5SQI0 421 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 MARC1Q5VT66 337 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 ALS2CLQ60I27 953 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 CENPUQ71F23 418 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 ZNF534Q76KX8 674 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 KIAA0907Q7Z7F0 614 aaPredicted RBP13.08□□□□□ -0.32
TOP3A-206ENST00000489131 ADGRG2Q8IZP9 1017 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.08□□□□□ -0.32
TOP3A-206ENST00000489131 TSEN2Q8NCE0 465 aaKnown RBP13.08□□□□□ -0.32
TOP3A-206ENST00000489131 OSCP1Q8WVF1 389 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 ING5Q8WYH8 240 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 IRF7Q92985 503 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 RSPRY1Q96DX4 576 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 SERPINB12Q96P63 405 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 LRRC3BQ96PB8 259 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 RBM15Q96T37 977 aaKnown RBP eCLIP13.08□□□□□ -0.326e-6■■□□□ 11.5
TOP3A-206ENST00000489131 FEM1AQ9BSK4 669 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 GLOD4Q9HC38 313 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 SPHK2Q9NRA0 654 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 SEPT10Q9P0V9 454 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 RSPH14Q9UHP6 348 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 SHROOM3Q8TF72 1996 aa13.08□□□□□ -0.32
TOP3A-206ENST00000489131 H0Y626 953 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 AP3B1O00203 1094 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 HOXC11O43248 304 aaPredicted RBP13.07□□□□□ -0.32
TOP3A-206ENST00000489131 HLA-DQB2P05538 268 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 APRTP07741 180 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 ABHD2P08910 425 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 NFKB1P19838 968 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 HSD17B3P37058 310 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 MMP13P45452 471 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 SARNPP82979 210 aaKnown RBP13.07□□□□□ -0.32
TOP3A-206ENST00000489131 SLC10A7Q0GE19 358 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 FCHO2Q0JRZ9 810 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 CDH18Q13634 790 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 ADGRE1Q14246 886 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 CBX2Q14781 532 aaPredicted RBP13.07□□□□□ -0.32
TOP3A-206ENST00000489131 FSCBQ5H9T9 825 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 CES5AQ6NT32 575 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 MTERF4Q7Z6M4 381 aaKnown RBP13.07□□□□□ -0.32
TOP3A-206ENST00000489131 METTL3Q86U44 580 aaKnown RBP13.07□□□□□ -0.32
TOP3A-206ENST00000489131 CAND1Q86VP6 1230 aaKnown RBP13.07□□□□□ -0.32
TOP3A-206ENST00000489131 MFN1Q8IWA4 741 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 PDIK1LQ8N165 341 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 OR7D4Q8NG98 312 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 DDI1Q8WTU0 396 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 NSMCE1Q8WV22 266 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 ACDQ96AP0 544 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 IMP4Q96G21 291 aaKnown RBP13.07□□□□□ -0.32
TOP3A-206ENST00000489131 RIPOR3Q96MK2 946 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 TTC25Q96NG3 672 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 NECTIN4Q96NY8 510 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 PSKH2Q96QS6 385 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 MGME1Q9BQP7 344 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 MLPHQ9BV36 600 aaPredicted RBP13.07□□□□□ -0.32
TOP3A-206ENST00000489131 SLC25A51Q9H1U9 297 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 ATP13A1Q9HD20 1204 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 VPS45Q9NRW7 570 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 HAUS2Q9NVX0 235 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 RBM22Q9NW64 420 aaKnown RBP eCLIP13.07□□□□□ -0.32
TOP3A-206ENST00000489131 FAM53CQ9NYF3 392 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 KIAA1522Q9P206 1035 aaPredicted RBP13.07□□□□□ -0.32
TOP3A-206ENST00000489131 FBXO10Q9UK96 956 aa13.07□□□□□ -0.32
TOP3A-206ENST00000489131 COLQQ9Y215 455 aaPredicted RBP13.07□□□□□ -0.32
TOP3A-206ENST00000489131 AAR2Q9Y312 384 aaKnown RBP13.07□□□□□ -0.32
TOP3A-206ENST00000489131 CDH23Q9H251 3354 aa13.06□□□□□ -0.32
TOP3A-206ENST00000489131 GOLGA6CA6NDK9 693 aa13.06□□□□□ -0.32
TOP3A-206ENST00000489131 GOLGA6BA6NDN3 693 aa13.06□□□□□ -0.32
TOP3A-206ENST00000489131 RIPK2O43353 540 aa13.06□□□□□ -0.32
TOP3A-206ENST00000489131 ANXA9O76027 345 aa13.06□□□□□ -0.32
TOP3A-206ENST00000489131 TTC4O95801 387 aa13.06□□□□□ -0.32
TOP3A-206ENST00000489131 CD160O95971 181 aa13.06□□□□□ -0.32
TOP3A-206ENST00000489131 GOLGA6DP0CG33 693 aa13.06□□□□□ -0.32
TOP3A-206ENST00000489131 CES1P23141 567 aa13.06□□□□□ -0.32
TOP3A-206ENST00000489131 TNNT3P45378 269 aaPredicted RBP13.06□□□□□ -0.32
TOP3A-206ENST00000489131 VASPP50552 380 aaPredicted RBP13.06□□□□□ -0.32
TOP3A-206ENST00000489131 GEMIN4P57678 1058 aaKnown RBP13.06□□□□□ -0.32
TOP3A-206ENST00000489131 ARF5P84085 180 aa13.06□□□□□ -0.32
TOP3A-206ENST00000489131 PRPSAP1Q14558 356 aa13.06□□□□□ -0.32
TOP3A-206ENST00000489131 DMC1Q14565 340 aa13.06□□□□□ -0.32
TOP3A-206ENST00000489131 LBRQ14739 615 aaKnown RBP13.06□□□□□ -0.32
TOP3A-206ENST00000489131 EML3Q32P44 896 aa13.06□□□□□ -0.32
TOP3A-206ENST00000489131 CFAP58Q5T655 872 aa13.06□□□□□ -0.32
TOP3A-206ENST00000489131 RNF219Q5W0B1 726 aaPredicted RBP13.06□□□□□ -0.32
TOP3A-206ENST00000489131 LRRC8BQ6P9F7 803 aa13.06□□□□□ -0.32
TOP3A-206ENST00000489131 LRIG3Q6UXM1 1119 aa13.06□□□□□ -0.32
TOP3A-206ENST00000489131 TMEM25Q86YD3 366 aa13.06□□□□□ -0.32
TOP3A-206ENST00000489131 CCDC117Q8IWD4 279 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms