RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 A0A1W2PP55 124 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 LRRC72A6NJI9 287 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 SLC30A4O14863 429 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 MCF2LO15068 1137 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 AKR1B10O60218 316 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 GDF9O60383 454 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 MT-CO1P00395 513 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 SYPP08247 313 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 SERPINF2P08697 491 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 VAV1P15498 845 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 GOT1P17174 413 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 MIPP30301 263 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 ACSL1P33121 698 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 LIMK1P53667 647 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 IRX4P78413 519 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 GFPT1Q06210 699 aaPredicted RBP14.6□□□□□ -0.07
BRCA1-218ENST00000489037 PIGHQ14442 188 aaPredicted RBP14.6□□□□□ -0.07
BRCA1-218ENST00000489037 STPG1Q5TH74 334 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 PEAR1Q5VY43 1037 aaPredicted RBP14.6□□□□□ -0.07
BRCA1-218ENST00000489037 SLC23A3Q6PIS1 610 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 LINGO4Q6UY18 593 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 Q6ZVU0 165 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 NLRP14Q86W24 1093 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 PSTKQ8IV42 348 aaKnown RBP14.6□□□□□ -0.07
BRCA1-218ENST00000489037 CNGA4Q8IV77 575 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 RTL3Q8N8U3 475 aaKnown RBP14.6□□□□□ -0.07
BRCA1-218ENST00000489037 ARHGEF2Q92974 986 aaKnown RBP14.6□□□□□ -0.07
BRCA1-218ENST00000489037 DNAJC7Q99615 494 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 MAGEB5Q9BZ81 275 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 CEP44Q9C0F1 390 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 TMEM74BQ9NUR3 256 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 DLL3Q9NYJ7 618 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 ZNF212Q9UDV6 495 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 IP6K2Q9UHH9 426 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 FZD4Q9ULV1 537 aa14.6□□□□□ -0.07
BRCA1-218ENST00000489037 FRYLO94915 3013 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 CXorf51AA0A1B0GTR3 108 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 A0A1B0GTW7 788 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 SSU72P8A0A1W2PR75 194 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 ZSCAN5CA6NGD5 496 aaPredicted RBP14.59□□□□□ -0.07
BRCA1-218ENST00000489037 FAM47DPA6NHR8 397 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 PATE3B3GLJ2 98 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 MYO1FO00160 1098 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 EEF2KO00418 725 aaKnown RBP14.59□□□□□ -0.07
BRCA1-218ENST00000489037 FSBPO95073 299 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 MAOBP27338 520 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 PCK1P35558 622 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 SERPINH1P50454 418 aaKnown RBP14.59□□□□□ -0.07
BRCA1-218ENST00000489037 DNA2P51530 1060 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 ZNF135P52742 658 aaPredicted RBP14.59□□□□□ -0.07
BRCA1-218ENST00000489037 GALCP54803 685 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 YBEYP58557 167 aaPredicted RBP14.59□□□□□ -0.07
BRCA1-218ENST00000489037 SLC18A3Q16572 532 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 DAB2IPQ5VWQ8 1189 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 C22orf39Q6P5X5 142 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 SARM1Q6SZW1 724 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 DGLUCYQ7Z3D6 616 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 PCDH20Q8N6Y1 951 aaKnown RBP14.59□□□□□ -0.07
BRCA1-218ENST00000489037 PIP4K2CQ8TBX8 421 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 CTNNBL1Q8WYA6 563 aaPredicted RBP14.59□□□□□ -0.07
BRCA1-218ENST00000489037 DNASE2BQ8WZ79 361 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 CCDC42Q96M95 316 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 SNRNP25Q9BV90 132 aaKnown RBP14.59□□□□□ -0.07
BRCA1-218ENST00000489037 NUP85Q9BW27 656 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 ACE2Q9BYF1 805 aaPredicted RBP14.59□□□□□ -0.07
BRCA1-218ENST00000489037 NEUROG2Q9H2A3 272 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 TMEM9BQ9NQ34 198 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 DYRK4Q9NR20 520 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 ABHD10Q9NUJ1 306 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 NDFIP2Q9NV92 336 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 GPATCH2LQ9NWQ4 482 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 ANAPC7Q9UJX3 599 aa14.59□□□□□ -0.07
BRCA1-218ENST00000489037 LNP1A1A4G5 178 aa14.58□□□□□ -0.08
BRCA1-218ENST00000489037 WASH4PA8MWX3 477 aa14.58□□□□□ -0.08
BRCA1-218ENST00000489037 AKR1B15C9JRZ8 316 aaPredicted RBP14.58□□□□□ -0.08
BRCA1-218ENST00000489037 K7ERQ8 282 aa14.58□□□□□ -0.08
BRCA1-218ENST00000489037 KDELR3O43731 214 aa14.58□□□□□ -0.08
BRCA1-218ENST00000489037 MFAP3LO75121 409 aa14.58□□□□□ -0.08
BRCA1-218ENST00000489037 LRCH4O75427 683 aa14.58□□□□□ -0.08
BRCA1-218ENST00000489037 PRNPP04156 253 aa14.58□□□□□ -0.08
BRCA1-218ENST00000489037 CYP1A2P05177 515 aa14.58□□□□□ -0.08
BRCA1-218ENST00000489037 H2AFZP0C0S5 128 aa14.58□□□□□ -0.08
BRCA1-218ENST00000489037 GLDCP23378 1020 aa14.58□□□□□ -0.08
BRCA1-218ENST00000489037 CHRNA3P32297 505 aa14.58□□□□□ -0.08
BRCA1-218ENST00000489037 ACVRL1P37023 503 aa14.58□□□□□ -0.08
BRCA1-218ENST00000489037 SSR1P43307 286 aaKnown RBP14.58□□□□□ -0.08
BRCA1-218ENST00000489037 ADKP55263 362 aaKnown RBP14.58□□□□□ -0.08
BRCA1-218ENST00000489037 ZNF252P-AS1Q0IIN9 211 aa14.58□□□□□ -0.08
BRCA1-218ENST00000489037 MAPK8IP2Q13387 824 aaPredicted RBP14.58□□□□□ -0.08
BRCA1-218ENST00000489037 PARP15Q460N3 678 aa14.58□□□□□ -0.08
BRCA1-218ENST00000489037 BOLA3Q53S33 107 aa14.58□□□□□ -0.08
BRCA1-218ENST00000489037 PPP6R3Q5H9R7 873 aaPredicted RBP14.58□□□□□ -0.08
BRCA1-218ENST00000489037 ARTNQ5T4W7 220 aa14.58□□□□□ -0.08
BRCA1-218ENST00000489037 KIAA0895LQ68EN5 471 aa14.58□□□□□ -0.08
BRCA1-218ENST00000489037 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.58□□□□□ -0.08
BRCA1-218ENST00000489037 H2AFVQ71UI9 128 aa14.58□□□□□ -0.08
BRCA1-218ENST00000489037 OR2T34Q8NGX1 318 aa14.58□□□□□ -0.08
BRCA1-218ENST00000489037 OR14C36Q8NHC7 312 aa14.58□□□□□ -0.08
BRCA1-218ENST00000489037 TRIM7Q9C029 511 aa14.58□□□□□ -0.08
BRCA1-218ENST00000489037 C6orf106Q9H6K1 298 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms