RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 IL1BP01584 269 aa16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 SERPINF2P08697 491 aa16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 GOT1P17174 413 aa16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 PSMD8P48556 350 aa16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 GALCP54803 685 aa16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 TBX2Q13207 712 aaPredicted RBP16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 MAPK8IP2Q13387 824 aaPredicted RBP16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 WDR45BQ5MNZ6 344 aa16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 CCDC122Q5T0U0 273 aa16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 ERMARDQ5T6L9 678 aa16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 RETSATQ6NUM9 610 aa16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 CEP76Q8TAP6 659 aa16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 OR8D1Q8WZ84 308 aa16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 ARHGEF26Q96DR7 871 aa16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 EPAS1Q99814 870 aa16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 ORAI3Q9BRQ5 295 aa16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 SNRNP25Q9BV90 132 aaKnown RBP16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 EDEM2Q9BV94 578 aa16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 MAGEH1Q9H213 219 aa16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 FSCN3Q9NQT6 498 aa16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 FZD4Q9ULV1 537 aa16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 SLC6A14Q9UN76 642 aa16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 AP4E1Q9UPM8 1137 aa16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 NCKAP1Q9Y2A7 1128 aa16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 SLCO1B1Q9Y6L6 691 aa16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 LAMA1P25391 3075 aa16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 DCDC2BA2VCK2 349 aa16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 RNF103O00237 685 aa16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 ALOX15BO15296 676 aa16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 RAMP2O60895 175 aa16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 RNASEH2AO75792 299 aaKnown RBP16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 RNF8O76064 485 aa16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 ADH1BP00325 375 aa16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 CTSLP07711 333 aa16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 TCF4P15884 667 aa16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 DESP17661 470 aa16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 IL1R2P27930 398 aa16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 PCK1P35558 622 aa16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 ETFBP38117 255 aa16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 SERPINH1P50454 418 aaKnown RBP16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 ADKP55263 362 aaKnown RBP16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 GFPT1Q06210 699 aaPredicted RBP16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 ACAP1Q15027 740 aa16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 POLD3Q15054 466 aaPredicted RBP16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 DAB2IPQ5VWQ8 1189 aa16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 IL31Q6EBC2 164 aa16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 C22orf39Q6P5X5 142 aa16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 RGL4Q8IZJ4 473 aa16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 UMODL1-AS1Q8N2C9 162 aa16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 HDDC3Q8N4P3 179 aa16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 GANCQ8TET4 914 aa16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 BIRC7Q96CA5 298 aa16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 CHP1Q99653 195 aa16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 NUSAP1Q9BXS6 441 aaKnown RBP16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 EIF2B4Q9UI10 523 aaKnown RBP16.29■□□□□ 0.2
CTDSP1-209ENST00000488627 NUMA1Q14980 2115 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 SSU72P8A0A1W2PR75 194 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 C4orf47A7E2U8 309 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 MEI4A8MW99 385 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 EIF3CLB5ME19 914 aaKnown RBP16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 PLK4O00444 970 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 MFAP3LO75121 409 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 CFIP05156 583 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 IGHV4-34P06331 123 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 ENGP17813 658 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 CHRNA3P32297 505 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 HTR7P34969 479 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 SFSWAPQ12872 951 aaKnown RBP16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 PIGHQ14442 188 aaPredicted RBP16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 SLC18A3Q16572 532 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 NCEH1Q6PIU2 408 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 DPY19L3Q6ZPD9 716 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 RABEPKQ7Z6M1 372 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 DSG4Q86SJ6 1040 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 PSTKQ8IV42 348 aaKnown RBP16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 NIPA2Q8N8Q9 360 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 CHST14Q8NCH0 376 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 PIP4K2CQ8TBX8 421 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 VOPP1Q96AW1 172 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 BTBD6Q96KE9 485 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 KCTD15Q96SI1 283 aaPredicted RBP16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 EIF3CQ99613 913 aaKnown RBP16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 OMDQ99983 421 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 NCAPGQ9BPX3 1015 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 NUP85Q9BW27 656 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 CEP44Q9C0F1 390 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 KLC2Q9H0B6 622 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 RBSNQ9H1K0 784 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 TNKS2Q9H2K2 1166 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 DHX35Q9H5Z1 703 aaKnown RBP16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 CATSPERBQ9H7T0 1116 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 ABHD10Q9NUJ1 306 aa16.28■□□□□ 0.2
CTDSP1-209ENST00000488627 FGF10O15520 208 aaPredicted RBP16.27■□□□□ 0.2
CTDSP1-209ENST00000488627 KDELR3O43731 214 aa16.27■□□□□ 0.2
CTDSP1-209ENST00000488627 BNIP3LO60238 219 aa16.27■□□□□ 0.2
CTDSP1-209ENST00000488627 PRPSAP2O60256 369 aa16.27■□□□□ 0.2
CTDSP1-209ENST00000488627 ADPRHP54922 357 aa16.27■□□□□ 0.2
CTDSP1-209ENST00000488627 YBEYP58557 167 aaPredicted RBP16.27■□□□□ 0.2
CTDSP1-209ENST00000488627 TPI1P60174 286 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms