RNA–Protein interactions for RNA: ENST00000488459.1

HUWE1-212, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene HUWE1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-212ENST00000488459 CLCN4P51793 760 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 MAXP61244 160 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 GNA12Q03113 381 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 IL10RBQ08334 325 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 SLC10A7Q0GE19 358 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 NR1H3Q13133 447 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 GPM6BQ13491 265 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 SERINC3Q13530 473 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 SHHQ15465 462 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 SMAD1Q15797 465 aaKnown RBP11.5□□□□□ -0.57
HUWE1-212ENST00000488459 PCSK7Q16549 785 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 KBTBD12Q3ZCT8 623 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 ARHGAP15Q53QZ3 475 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 CERCAMQ5T4B2 595 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 GPR158Q5T848 1215 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 ZNF697Q5TEC3 545 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 RNF219Q5W0B1 726 aaPredicted RBP11.5□□□□□ -0.57
HUWE1-212ENST00000488459 FAM109BQ6ICB4 259 aaPredicted RBP11.5□□□□□ -0.57
HUWE1-212ENST00000488459 NAPEPLDQ6IQ20 393 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 CES3Q6UWW8 571 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 GAREM2Q75VX8 874 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 LINC00523Q86TU6 105 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 RBM23Q86U06 439 aaKnown RBP11.5□□□□□ -0.57
HUWE1-212ENST00000488459 TAX1BP1Q86VP1 789 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 TMC8Q8IU68 726 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 SLC25A41Q8N5S1 370 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 MAML1Q92585 1016 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 BHMTQ93088 406 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 TMA16Q96EY4 203 aaKnown RBP11.5□□□□□ -0.57
HUWE1-212ENST00000488459 PRICKLE1Q96MT3 831 aaPredicted RBP11.5□□□□□ -0.57
HUWE1-212ENST00000488459 PPP1R2P1Q96PQ5 205 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 TGS1Q96RS0 853 aaKnown RBP11.5□□□□□ -0.57
HUWE1-212ENST00000488459 SMG9Q9H0W8 520 aaKnown RBP11.5□□□□□ -0.57
HUWE1-212ENST00000488459 MUC3BQ9H195 1237 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 MAGEH1Q9H213 219 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 TRABDQ9H4I3 376 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 CASS4Q9NQ75 786 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 MAN1C1Q9NR34 630 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 PSD3Q9NYI0 1048 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.5□□□□□ -0.57
HUWE1-212ENST00000488459 LTBP2Q14767 1821 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 PTPRDP23468 1912 aa11.5□□□□□ -0.57
HUWE1-212ENST00000488459 A0A0D9SEW6 157 aa11.49□□□□□ -0.57
HUWE1-212ENST00000488459 TYW5A2RUC4 315 aaKnown RBP11.49□□□□□ -0.57
HUWE1-212ENST00000488459 A6NNZ2 444 aa11.49□□□□□ -0.57
HUWE1-212ENST00000488459 AP3B1O00203 1094 aa11.49□□□□□ -0.57
HUWE1-212ENST00000488459 PRAMEF11O60813 436 aa11.49□□□□□ -0.57
HUWE1-212ENST00000488459 SPAG7O75391 227 aa11.49□□□□□ -0.57
HUWE1-212ENST00000488459 MT-CYBP00156 380 aaPredicted RBP11.49□□□□□ -0.57
HUWE1-212ENST00000488459 MT-ND3P03897 115 aa11.49□□□□□ -0.57
HUWE1-212ENST00000488459 GCAP28676 217 aa11.49□□□□□ -0.57
HUWE1-212ENST00000488459 DSC2Q02487 901 aa11.49□□□□□ -0.57
HUWE1-212ENST00000488459 HNRNPDQ14103 355 aaKnown RBP11.49□□□□□ -0.57
HUWE1-212ENST00000488459 ZNF235Q14590 738 aa11.49□□□□□ -0.57
HUWE1-212ENST00000488459 LBRQ14739 615 aaKnown RBP11.49□□□□□ -0.57
HUWE1-212ENST00000488459 TUBB8Q3ZCM7 444 aa11.49□□□□□ -0.57
HUWE1-212ENST00000488459 C5orf22Q49AR2 442 aa11.49□□□□□ -0.57
HUWE1-212ENST00000488459 STXBP5Q5T5C0 1151 aa11.49□□□□□ -0.57
HUWE1-212ENST00000488459 TRMT10BQ6PF06 316 aaKnown RBP11.49□□□□□ -0.57
HUWE1-212ENST00000488459 TDRPQ86YL5 185 aa11.49□□□□□ -0.57
HUWE1-212ENST00000488459 CCNJLQ8IV13 435 aa11.49□□□□□ -0.57
HUWE1-212ENST00000488459 CCDC117Q8IWD4 279 aaPredicted RBP11.49□□□□□ -0.57
HUWE1-212ENST00000488459 BBS5Q8N3I7 341 aa11.49□□□□□ -0.57
HUWE1-212ENST00000488459 HJURPQ8NCD3 748 aaPredicted RBP11.49□□□□□ -0.57
HUWE1-212ENST00000488459 GSDMBQ8TAX9 411 aa11.49□□□□□ -0.57
HUWE1-212ENST00000488459 ZSCAN18Q8TBC5 510 aaPredicted RBP11.49□□□□□ -0.57
HUWE1-212ENST00000488459 FSD1LQ9BXM9 530 aa11.49□□□□□ -0.57
HUWE1-212ENST00000488459 LRRC3Q9BY71 257 aa11.49□□□□□ -0.57
HUWE1-212ENST00000488459 SLC25A51Q9H1U9 297 aa11.49□□□□□ -0.57
HUWE1-212ENST00000488459 ATP13A1Q9HD20 1204 aa11.49□□□□□ -0.57
HUWE1-212ENST00000488459 NKIRAS1Q9NYS0 192 aa11.49□□□□□ -0.57
HUWE1-212ENST00000488459 IRAK3Q9Y616 596 aa11.49□□□□□ -0.57
HUWE1-212ENST00000488459 COL4A4P53420 1690 aaPredicted RBP11.49□□□□□ -0.57
HUWE1-212ENST00000488459 PATJQ8NI35 1801 aa11.49□□□□□ -0.57
HUWE1-212ENST00000488459 CENPFP49454 3210 aa11.48□□□□□ -0.57
HUWE1-212ENST00000488459 IQANK1A0A1B0GTG1 560 aa11.48□□□□□ -0.57
HUWE1-212ENST00000488459 CCDC78A2IDD5 438 aa11.48□□□□□ -0.57
HUWE1-212ENST00000488459 CXorf49A8MYA2 514 aaPredicted RBP11.48□□□□□ -0.57
HUWE1-212ENST00000488459 H3BNC9 293 aa11.48□□□□□ -0.57
HUWE1-212ENST00000488459 CBX4O00257 560 aa11.48□□□□□ -0.57
HUWE1-212ENST00000488459 XYLBO75191 536 aa11.48□□□□□ -0.57
HUWE1-212ENST00000488459 FAM155BO75949 473 aa11.48□□□□□ -0.57
HUWE1-212ENST00000488459 FGF19O95750 216 aa11.48□□□□□ -0.57
HUWE1-212ENST00000488459 PEX11BO96011 259 aa11.48□□□□□ -0.57
HUWE1-212ENST00000488459 POLBP06746 335 aa11.48□□□□□ -0.57
HUWE1-212ENST00000488459 CHN1P15882 459 aa11.48□□□□□ -0.57
HUWE1-212ENST00000488459 CREB1P16220 341 aa11.48□□□□□ -0.57
HUWE1-212ENST00000488459 CD86P42081 329 aa11.48□□□□□ -0.57
HUWE1-212ENST00000488459 MAGEA10P43363 369 aaPredicted RBP11.48□□□□□ -0.57
HUWE1-212ENST00000488459 WNT3AP56704 352 aa11.48□□□□□ -0.57
HUWE1-212ENST00000488459 NTHL1P78549 312 aa11.48□□□□□ -0.57
HUWE1-212ENST00000488459 NIPAL4Q0D2K0 466 aa11.48□□□□□ -0.57
HUWE1-212ENST00000488459 CDH17Q12864 832 aa11.48□□□□□ -0.57
HUWE1-212ENST00000488459 CBLBQ13191 982 aa11.48□□□□□ -0.57
HUWE1-212ENST00000488459 SEPT6Q14141 434 aa11.48□□□□□ -0.57
HUWE1-212ENST00000488459 TEAD2Q15562 447 aa11.48□□□□□ -0.57
HUWE1-212ENST00000488459 TNFAIP8L3Q5GJ75 292 aa11.48□□□□□ -0.57
HUWE1-212ENST00000488459 LGSNQ5TDP6 509 aa11.48□□□□□ -0.57
HUWE1-212ENST00000488459 TMCO4Q5TGY1 634 aa11.48□□□□□ -0.57
HUWE1-212ENST00000488459 EMC10Q5UCC4 262 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms