RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 ATP11AP98196 1134 aa23.14■■□□□ 1.29
PTPN4-211ENST00000488279 AGBL4Q5VU57 503 aa23.14■■□□□ 1.29
PTPN4-211ENST00000488279 NAPEPLDQ6IQ20 393 aa23.14■■□□□ 1.29
PTPN4-211ENST00000488279 ZNF783Q6ZMS7 281 aa23.14■■□□□ 1.29
PTPN4-211ENST00000488279 RBM43Q6ZSC3 357 aaKnown RBP23.14■■□□□ 1.29
PTPN4-211ENST00000488279 MFSD2AQ8NA29 543 aa23.14■■□□□ 1.29
PTPN4-211ENST00000488279 ANKRD20A12PQ8NF67 263 aa23.14■■□□□ 1.29
PTPN4-211ENST00000488279 OR2A12Q8NGT7 310 aa23.14■■□□□ 1.29
PTPN4-211ENST00000488279 GPT2Q8TD30 523 aa23.14■■□□□ 1.29
PTPN4-211ENST00000488279 GBP4Q96PP9 640 aa23.14■■□□□ 1.29
PTPN4-211ENST00000488279 ZYG11BQ9C0D3 744 aa23.14■■□□□ 1.29
PTPN4-211ENST00000488279 NLRC4Q9NPP4 1024 aa23.14■■□□□ 1.29
PTPN4-211ENST00000488279 METTL5Q9NRN9 209 aaKnown RBP23.14■■□□□ 1.29
PTPN4-211ENST00000488279 DMTF1Q9Y222 760 aa23.14■■□□□ 1.29
PTPN4-211ENST00000488279 ILVBLA1L0T0 632 aa23.13■■□□□ 1.29
PTPN4-211ENST00000488279 SRRM3A6NNA2 597 aaPredicted RBP23.13■■□□□ 1.29
PTPN4-211ENST00000488279 YKT6O15498 198 aa23.13■■□□□ 1.29
PTPN4-211ENST00000488279 DKK1O94907 266 aa23.13■■□□□ 1.29
PTPN4-211ENST00000488279 ITGAVP06756 1048 aa23.13■■□□□ 1.29
PTPN4-211ENST00000488279 CHRNB2P17787 502 aa23.13■■□□□ 1.29
PTPN4-211ENST00000488279 RRM1P23921 792 aa23.13■■□□□ 1.29
PTPN4-211ENST00000488279 CHRNA3P32297 505 aa23.13■■□□□ 1.29
PTPN4-211ENST00000488279 STAT1P42224 750 aa23.13■■□□□ 1.29
PTPN4-211ENST00000488279 ARRB1P49407 418 aaPredicted RBP23.13■■□□□ 1.29
PTPN4-211ENST00000488279 FMO1Q01740 532 aa23.13■■□□□ 1.29
PTPN4-211ENST00000488279 SASS6Q6UVJ0 657 aa23.13■■□□□ 1.29
PTPN4-211ENST00000488279 LINGO4Q6UY18 593 aa23.13■■□□□ 1.29
PTPN4-211ENST00000488279 TRIM72Q6ZMU5 477 aa23.13■■□□□ 1.29
PTPN4-211ENST00000488279 TRIM69Q86WT6 500 aa23.13■■□□□ 1.29
PTPN4-211ENST00000488279 EMC1Q8N766 993 aa23.13■■□□□ 1.29
PTPN4-211ENST00000488279 TMIEQ8NEW7 156 aa23.13■■□□□ 1.29
PTPN4-211ENST00000488279 SLC30A5Q8TAD4 765 aa23.13■■□□□ 1.29
PTPN4-211ENST00000488279 SPON2Q9BUD6 331 aa23.13■■□□□ 1.29
PTPN4-211ENST00000488279 ERVMER34-1Q9H9K5 563 aa23.13■■□□□ 1.29
PTPN4-211ENST00000488279 KPNA3O00505 521 aaPredicted RBP23.12■■□□□ 1.29
PTPN4-211ENST00000488279 SMAD6O43541 496 aaKnown RBP23.12■■□□□ 1.29
PTPN4-211ENST00000488279 PRNPP04156 253 aa23.12■■□□□ 1.29
PTPN4-211ENST00000488279 RECQLP46063 649 aaPredicted RBP23.12■■□□□ 1.29
PTPN4-211ENST00000488279 NXPH1P58417 271 aa23.12■■□□□ 1.29
PTPN4-211ENST00000488279 SLC20A2Q08357 652 aa23.12■■□□□ 1.29
PTPN4-211ENST00000488279 SCAPQ12770 1279 aa23.12■■□□□ 1.29
PTPN4-211ENST00000488279 STAT4Q14765 748 aa23.12■■□□□ 1.29
PTPN4-211ENST00000488279 ARL13BQ3SXY8 428 aa23.12■■□□□ 1.29
PTPN4-211ENST00000488279 ARTNQ5T4W7 220 aa23.12■■□□□ 1.29
PTPN4-211ENST00000488279 RETSATQ6NUM9 610 aa23.12■■□□□ 1.29
PTPN4-211ENST00000488279 TMPRSS7Q7RTY8 843 aa23.12■■□□□ 1.29
PTPN4-211ENST00000488279 PHLDB2Q86SQ0 1253 aa23.12■■□□□ 1.29
PTPN4-211ENST00000488279 GATAD2AQ86YP4 633 aa23.12■■□□□ 1.29
PTPN4-211ENST00000488279 PCMTD1Q96MG8 357 aaPredicted RBP23.12■■□□□ 1.29
PTPN4-211ENST00000488279 PREBQ9HCU5 417 aa23.12■■□□□ 1.29
PTPN4-211ENST00000488279 DYRK4Q9NR20 520 aa23.12■■□□□ 1.29
PTPN4-211ENST00000488279 ANO10Q9NW15 660 aa23.12■■□□□ 1.29
PTPN4-211ENST00000488279 PPARGC1AQ9UBK2 798 aaKnown RBP23.12■■□□□ 1.29
PTPN4-211ENST00000488279 FTSJ1Q9UET6 329 aa23.12■■□□□ 1.29
PTPN4-211ENST00000488279 CBX4O00257 560 aa23.11■■□□□ 1.29
PTPN4-211ENST00000488279 EPHB6O15197 1021 aa23.11■■□□□ 1.29
PTPN4-211ENST00000488279 MAGEC1O60732 1142 aa23.11■■□□□ 1.29
PTPN4-211ENST00000488279 CTSLP07711 333 aa23.11■■□□□ 1.29
PTPN4-211ENST00000488279 SDC4P31431 198 aa23.11■■□□□ 1.29
PTPN4-211ENST00000488279 COPB1P53618 953 aaKnown RBP23.11■■□□□ 1.29
PTPN4-211ENST00000488279 OVGP1Q12889 678 aa23.11■■□□□ 1.29
PTPN4-211ENST00000488279 SETMARQ53H47 684 aaPredicted RBP23.11■■□□□ 1.29
PTPN4-211ENST00000488279 IQCHQ86VS3 1027 aa23.11■■□□□ 1.29
PTPN4-211ENST00000488279 OXR1Q8N573 874 aa23.11■■□□□ 1.29
PTPN4-211ENST00000488279 OR7D4Q8NG98 312 aa23.11■■□□□ 1.29
PTPN4-211ENST00000488279 SAP25Q8TEE9 199 aa23.11■■□□□ 1.29
PTPN4-211ENST00000488279 RXFP2Q8WXD0 754 aa23.11■■□□□ 1.29
PTPN4-211ENST00000488279 ZNF212Q9UDV6 495 aa23.11■■□□□ 1.29
PTPN4-211ENST00000488279 OR12D3Q9UGF7 316 aa23.11■■□□□ 1.29
PTPN4-211ENST00000488279 SIK3Q9Y2K2 1263 aa23.11■■□□□ 1.29
PTPN4-211ENST00000488279 PRAMEF26H0Y7S4 382 aa23.1■■□□□ 1.29
PTPN4-211ENST00000488279 GOLGA6L22H0YM25 854 aa23.1■■□□□ 1.29
PTPN4-211ENST00000488279 CDK11BP21127 795 aaKnown RBP23.1■■□□□ 1.29
PTPN4-211ENST00000488279 GLDCP23378 1020 aa23.1■■□□□ 1.29
PTPN4-211ENST00000488279 ADRA1BP35368 520 aa23.1■■□□□ 1.29
PTPN4-211ENST00000488279 TAS2R38P59533 333 aa23.1■■□□□ 1.29
PTPN4-211ENST00000488279 SYCP1Q15431 976 aa23.1■■□□□ 1.29
PTPN4-211ENST00000488279 SHBQ15464 509 aa23.1■■□□□ 1.29
PTPN4-211ENST00000488279 CDO1Q16878 200 aa23.1■■□□□ 1.29
PTPN4-211ENST00000488279 C15orf59Q2T9L4 293 aaPredicted RBP23.1■■□□□ 1.29
PTPN4-211ENST00000488279 CCDC14Q49A88 953 aa23.1■■□□□ 1.29
PTPN4-211ENST00000488279 PIP5KL1Q5T9C9 394 aa23.1■■□□□ 1.29
PTPN4-211ENST00000488279 NEK5Q6P3R8 708 aa23.1■■□□□ 1.29
PTPN4-211ENST00000488279 GALNT15Q8N3T1 639 aa23.1■■□□□ 1.29
PTPN4-211ENST00000488279 NEK11Q8NG66 645 aa23.1■■□□□ 1.29
PTPN4-211ENST00000488279 C11orf70Q9BRQ4 267 aa23.1■■□□□ 1.29
PTPN4-211ENST00000488279 TNKS2Q9H2K2 1166 aa23.1■■□□□ 1.29
PTPN4-211ENST00000488279 ATP13A1Q9HD20 1204 aa23.1■■□□□ 1.29
PTPN4-211ENST00000488279 IL36AQ9UHA7 158 aa23.1■■□□□ 1.29
PTPN4-211ENST00000488279 LIMA1Q9UHB6 759 aaKnown RBP23.1■■□□□ 1.29
PTPN4-211ENST00000488279 C2CD4BA6NLJ0 364 aa23.09■■□□□ 1.29
PTPN4-211ENST00000488279 RNGTTO60942 597 aaKnown RBP23.09■■□□□ 1.29
PTPN4-211ENST00000488279 CAPNS1P04632 268 aa23.09■■□□□ 1.29
PTPN4-211ENST00000488279 KRT3P12035 628 aa23.09■■□□□ 1.29
PTPN4-211ENST00000488279 UNGP13051 313 aaPredicted RBP23.09■■□□□ 1.29
PTPN4-211ENST00000488279 NSFP46459 744 aaKnown RBP23.09■■□□□ 1.29
PTPN4-211ENST00000488279 RXRGP48443 463 aa23.09■■□□□ 1.29
PTPN4-211ENST00000488279 MYL5Q02045 173 aa23.09■■□□□ 1.29
PTPN4-211ENST00000488279 GNA12Q03113 381 aa23.09■■□□□ 1.29
PTPN4-211ENST00000488279 UBXN1Q04323 297 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms