RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 PITRM1Q5JRX3 1037 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 RALGPS1Q5JS13 557 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 NPNTQ6UXI9 565 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 FAM71DQ8N9W8 422 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 UBXN4Q92575 508 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 TTC17Q96AE7 1141 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 P2RY11Q96G91 374 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 ZFYVE19Q96K21 471 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 LMLNQ96KR4 655 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 SPATA13Q96N96 652 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 LGMNQ99538 433 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 TMEM121Q9BTD3 319 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 RPP25Q9BUL9 199 aaKnown RBP11.27□□□□□ -0.61
HDLBP-242ENST00000488013 FAM129AQ9BZQ8 928 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 CEP44Q9C0F1 390 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 PCDH9Q9HC56 1237 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 NDFIP2Q9NV92 336 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 GOLGA6AQ9NYA3 693 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 UBA2Q9UBT2 640 aaPredicted RBP11.27□□□□□ -0.61
HDLBP-242ENST00000488013 SLC25A13Q9UJS0 675 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 PLA2G4CQ9UP65 541 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 MYO16Q9Y6X6 1858 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 ZNF638Q14966 1978 aaKnown RBP11.27□□□□□ -0.61
HDLBP-242ENST00000488013 TARSL2A2RTX5 802 aaKnown RBP11.26□□□□□ -0.61
HDLBP-242ENST00000488013 TBC1D3BA6NDS4 549 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 IFNB1P01574 187 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 APODP05090 189 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 DLDP09622 509 aaKnown RBP11.26□□□□□ -0.61
HDLBP-242ENST00000488013 CISD3P0C7P0 127 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 DRD1P21728 446 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 RBL1P28749 1068 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 TNFRSF4P43489 277 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 DRG2P55039 364 aaKnown RBP11.26□□□□□ -0.61
HDLBP-242ENST00000488013 ST8SIA6P61647 398 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 ECT2LQ008S8 904 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 TFF2Q03403 129 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 C2orf54Q08AI8 447 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 NSUN2Q08J23 767 aaKnown RBP eCLIP11.26□□□□□ -0.61
HDLBP-242ENST00000488013 GRSF1Q12849 480 aaKnown RBP eCLIP11.26□□□□□ -0.61
HDLBP-242ENST00000488013 PRPSAP1Q14558 356 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 LBRQ14739 615 aaKnown RBP11.26□□□□□ -0.61
HDLBP-242ENST00000488013 FSCBQ5H9T9 825 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 ARHGEF18Q6ZSZ5 1173 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 PCGF5Q86SE9 256 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 PLPP6Q8IY26 295 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 UBALD2Q8IYN6 164 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 TEX26Q8N6G2 289 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 OR7D4Q8NG98 312 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 ISG20Q96AZ6 181 aaKnown RBP11.26□□□□□ -0.61
HDLBP-242ENST00000488013 ALG14Q96F25 216 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 SHDQ96IW2 340 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 P2RY13Q9BPV8 354 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 USP29Q9HBJ7 922 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 GTSE1Q9NYZ3 720 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 KLHL8Q9P2G9 620 aaPredicted RBP11.26□□□□□ -0.61
HDLBP-242ENST00000488013 HS3ST2Q9Y278 367 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 MFHAS1Q9Y4C4 1052 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 CUL9Q8IWT3 2517 aa11.26□□□□□ -0.61
HDLBP-242ENST00000488013 SZT2Q5T011 3432 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-242ENST00000488013 ERI2A8K979 691 aaKnown RBP11.25□□□□□ -0.61
HDLBP-242ENST00000488013 AP3B1O00203 1094 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 RNF103O00237 685 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 PSMD3O43242 534 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 ZMPSTE24O75844 475 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 KAT7O95251 611 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 KRT14P02533 472 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 MZF1P28698 734 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-242ENST00000488013 CD70P32970 193 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 ACVRL1P37023 503 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 FDFT1P37268 417 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 MMP13P45452 471 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 KCNJ1P48048 391 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 SERPINH1P50454 418 aaKnown RBP11.25□□□□□ -0.61
HDLBP-242ENST00000488013 CDK16Q00536 496 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 CAV1Q03135 178 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 PRKCQQ04759 706 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 PTK6Q13882 451 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 ZNF235Q14590 738 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 SLC14A2Q15849 920 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 PARP6Q2NL67 630 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 FBXO43Q4G163 708 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 MBLAC2Q68D91 279 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 TTC27Q6P3X3 843 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 PID1Q7Z2X4 250 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 ADIPOR2Q86V24 386 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 JAMLQ86YT9 394 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 NAT16Q8N8M0 369 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 EIF1ADQ8N9N8 165 aaKnown RBP11.25□□□□□ -0.61
HDLBP-242ENST00000488013 TERB1Q8NA31 727 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 TEKT5Q96M29 485 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 ASB2Q96Q27 587 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 PSKH2Q96QS6 385 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 IL12RB2Q99665 862 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 ERP44Q9BS26 406 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 CINPQ9BW66 212 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-242ENST00000488013 POLR1EQ9GZS1 481 aaKnown RBP11.25□□□□□ -0.61
HDLBP-242ENST00000488013 PDFQ9HBH1 243 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 VPS45Q9NRW7 570 aa11.25□□□□□ -0.61
HDLBP-242ENST00000488013 RBM22Q9NW64 420 aaKnown RBP eCLIP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms