RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 PRSS47A8MTI9 375 aa4.54□□□□□ -1.68
SMC4-219ENST00000487747 GRM8O00222 908 aa4.54□□□□□ -1.68
SMC4-219ENST00000487747 HSPB6O14558 160 aa4.54□□□□□ -1.68
SMC4-219ENST00000487747 LARGE1O95461 756 aa4.54□□□□□ -1.68
SMC4-219ENST00000487747 DLX5P56178 289 aa4.54□□□□□ -1.68
SMC4-219ENST00000487747 CDK18Q07002 472 aa4.54□□□□□ -1.68
SMC4-219ENST00000487747 C5orf22Q49AR2 442 aa4.54□□□□□ -1.68
SMC4-219ENST00000487747 IL31Q6EBC2 164 aa4.54□□□□□ -1.68
SMC4-219ENST00000487747 MIGA1Q8NAN2 632 aa4.54□□□□□ -1.68
SMC4-219ENST00000487747 SGCZQ96LD1 299 aa4.54□□□□□ -1.68
SMC4-219ENST00000487747 C8orf48Q96LL4 319 aa4.54□□□□□ -1.68
SMC4-219ENST00000487747 LIN7CQ9NUP9 197 aaKnown RBP4.54□□□□□ -1.68
SMC4-219ENST00000487747 CHPF2Q9P2E5 772 aa4.54□□□□□ -1.68
SMC4-219ENST00000487747 CDC23Q9UJX2 597 aa4.54□□□□□ -1.68
SMC4-219ENST00000487747 DENND3A2RUS2 1198 aa4.53□□□□□ -1.68
SMC4-219ENST00000487747 LINC01553A4QN01 128 aa4.53□□□□□ -1.68
SMC4-219ENST00000487747 NPIPB13A6NJU9 1138 aa4.53□□□□□ -1.68
SMC4-219ENST00000487747 NPIPB5A8MRT5 1133 aa4.53□□□□□ -1.68
SMC4-219ENST00000487747 NPIPB4C9JG80 1138 aa4.53□□□□□ -1.68
SMC4-219ENST00000487747 TMCC1O94876 653 aa4.53□□□□□ -1.68
SMC4-219ENST00000487747 CLDN7O95471 211 aa4.53□□□□□ -1.68
SMC4-219ENST00000487747 FCGR2AP12318 317 aa4.53□□□□□ -1.68
SMC4-219ENST00000487747 AMTP48728 403 aa4.53□□□□□ -1.68
SMC4-219ENST00000487747 NUDT6P53370 316 aa4.53□□□□□ -1.68
SMC4-219ENST00000487747 ZNF672Q499Z4 452 aaPredicted RBP4.53□□□□□ -1.68
SMC4-219ENST00000487747 ATG9BQ674R7 924 aa4.53□□□□□ -1.68
SMC4-219ENST00000487747 GATAD2AQ86YP4 633 aa4.53□□□□□ -1.68
SMC4-219ENST00000487747 KCNJ9Q92806 393 aa4.53□□□□□ -1.68
SMC4-219ENST00000487747 PKP4Q99569 1192 aa4.53□□□□□ -1.68
SMC4-219ENST00000487747 PDE11AQ9HCR9 933 aa4.53□□□□□ -1.68
SMC4-219ENST00000487747 SLC22A11Q9NSA0 550 aa4.53□□□□□ -1.68
SMC4-219ENST00000487747 SLC25A13Q9UJS0 675 aa4.53□□□□□ -1.68
SMC4-219ENST00000487747 DAPP1Q9UN19 280 aa4.53□□□□□ -1.68
SMC4-219ENST00000487747 IGLV5-52A0A0A0MRZ9 124 aa4.52□□□□□ -1.69
SMC4-219ENST00000487747 DDTLA6NHG4 134 aaPredicted RBP4.52□□□□□ -1.69
SMC4-219ENST00000487747 ASAP2O43150 1006 aa4.52□□□□□ -1.69
SMC4-219ENST00000487747 NAGAP17050 411 aa4.52□□□□□ -1.69
SMC4-219ENST00000487747 NEK3P51956 506 aa4.52□□□□□ -1.69
SMC4-219ENST00000487747 AK2P54819 239 aa4.52□□□□□ -1.69
SMC4-219ENST00000487747 CDH12P55289 794 aa4.52□□□□□ -1.69
SMC4-219ENST00000487747 SYTL1Q8IYJ3 562 aa4.52□□□□□ -1.69
SMC4-219ENST00000487747 FAM216AQ8WUB2 273 aa4.52□□□□□ -1.69
SMC4-219ENST00000487747 TRIM31Q9BZY9 425 aa4.52□□□□□ -1.69
SMC4-219ENST00000487747 METTL14Q9HCE5 456 aaKnown RBP4.52□□□□□ -1.69
SMC4-219ENST00000487747 MST1RQ04912 1400 aa4.52□□□□□ -1.69
SMC4-219ENST00000487747 NTN3O00634 580 aaPredicted RBP4.51□□□□□ -1.69
SMC4-219ENST00000487747 SLC16A5O15375 505 aa4.51□□□□□ -1.69
SMC4-219ENST00000487747 KCNJ13O60928 360 aa4.51□□□□□ -1.69
SMC4-219ENST00000487747 TCEA1P23193 301 aaKnown RBP4.51□□□□□ -1.69
SMC4-219ENST00000487747 PRKCHP24723 683 aa4.51□□□□□ -1.69
SMC4-219ENST00000487747 KRTAP10-5P60370 271 aa4.51□□□□□ -1.69
SMC4-219ENST00000487747 TUBA1BP68363 451 aa4.51□□□□□ -1.69
SMC4-219ENST00000487747 POU5F1BQ06416 359 aa4.51□□□□□ -1.69
SMC4-219ENST00000487747 MYBPC2Q14324 1141 aa4.51□□□□□ -1.69
SMC4-219ENST00000487747 SPARCL1Q14515 664 aa4.51□□□□□ -1.69
SMC4-219ENST00000487747 HLFQ16534 295 aa4.51□□□□□ -1.69
SMC4-219ENST00000487747 KIF19Q2TAC6 998 aa4.51□□□□□ -1.69
SMC4-219ENST00000487747 GALNTL6Q49A17 601 aa4.51□□□□□ -1.69
SMC4-219ENST00000487747 LRRC24Q50LG9 513 aa4.51□□□□□ -1.69
SMC4-219ENST00000487747 GGT6Q6P531 493 aa4.51□□□□□ -1.69
SMC4-219ENST00000487747 MEX3BQ6ZN04 569 aaKnown RBP4.51□□□□□ -1.69
SMC4-219ENST00000487747 MUC20Q8N307 709 aaPredicted RBP4.51□□□□□ -1.69
SMC4-219ENST00000487747 LILRB1Q8NHL6 650 aaPredicted RBP4.51□□□□□ -1.69
SMC4-219ENST00000487747 SCAMP5Q8TAC9 235 aa4.51□□□□□ -1.69
SMC4-219ENST00000487747 SLC35F5Q8WV83 523 aa4.51□□□□□ -1.69
SMC4-219ENST00000487747 ZNF333Q96JL9 665 aa4.51□□□□□ -1.69
SMC4-219ENST00000487747 INPP4AQ96PE3 977 aaPredicted RBP4.51□□□□□ -1.69
SMC4-219ENST00000487747 OBP2BQ9NPH6 170 aa4.51□□□□□ -1.69
SMC4-219ENST00000487747 IL36RNQ9UBH0 155 aa4.51□□□□□ -1.69
SMC4-219ENST00000487747 LOC102724159A0A0B4J2E5 919 aa4.5□□□□□ -1.69
SMC4-219ENST00000487747 DDAH2O95865 285 aa4.5□□□□□ -1.69
SMC4-219ENST00000487747 UMODP07911 640 aa4.5□□□□□ -1.69
SMC4-219ENST00000487747 AVPR2P30518 371 aa4.5□□□□□ -1.69
SMC4-219ENST00000487747 GNALP38405 381 aa4.5□□□□□ -1.69
SMC4-219ENST00000487747 PNLIPRP1P54315 467 aa4.5□□□□□ -1.69
SMC4-219ENST00000487747 ILF3Q12906 894 aaKnown RBP eCLIP4.5□□□□□ -1.698e-14■■■■■ 40.3
SMC4-219ENST00000487747 SLC39A14Q15043 492 aa4.5□□□□□ -1.69
SMC4-219ENST00000487747 PWP2Q15269 919 aaKnown RBP4.5□□□□□ -1.69
SMC4-219ENST00000487747 ZACNQ401N2 412 aa4.5□□□□□ -1.69
SMC4-219ENST00000487747 C11orf96Q7Z7L8 435 aa4.5□□□□□ -1.69
SMC4-219ENST00000487747 SRLQ86TD4 932 aa4.5□□□□□ -1.69
SMC4-219ENST00000487747 SCN4BQ8IWT1 228 aa4.5□□□□□ -1.69
SMC4-219ENST00000487747 DEPTORQ8TB45 409 aa4.5□□□□□ -1.69
SMC4-219ENST00000487747 FAM71BQ8TC56 605 aa4.5□□□□□ -1.69
SMC4-219ENST00000487747 HDAC7Q8WUI4 952 aa4.5□□□□□ -1.69
SMC4-219ENST00000487747 FAR1Q8WVX9 515 aa4.5□□□□□ -1.69
SMC4-219ENST00000487747 RSC1A1Q92681 617 aa4.5□□□□□ -1.69
SMC4-219ENST00000487747 ARRDC3Q96B67 414 aa4.5□□□□□ -1.69
SMC4-219ENST00000487747 GFM1Q96RP9 751 aaKnown RBP4.5□□□□□ -1.69
SMC4-219ENST00000487747 MYD88Q99836 296 aa4.5□□□□□ -1.69
SMC4-219ENST00000487747 ABHD16BQ9H3Z7 469 aa4.5□□□□□ -1.69
SMC4-219ENST00000487747 ACAD9Q9H845 621 aa4.5□□□□□ -1.69
SMC4-219ENST00000487747 SDF2L1Q9HCN8 221 aa4.5□□□□□ -1.69
SMC4-219ENST00000487747 A0A0B4J293 547 aa4.49□□□□□ -1.69
SMC4-219ENST00000487747 TARSL2A2RTX5 802 aaKnown RBP4.49□□□□□ -1.69
SMC4-219ENST00000487747 LGALS16A8MUM7 142 aa4.49□□□□□ -1.69
SMC4-219ENST00000487747 IGLV2-11P01706 119 aa4.49□□□□□ -1.69
SMC4-219ENST00000487747 HLA-DQA2P01906 255 aa4.49□□□□□ -1.69
SMC4-219ENST00000487747 SNRNP70P08621 437 aaKnown RBP4.49□□□□□ -1.69
SMC4-219ENST00000487747 MYZAPP0CAP1 466 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms