RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 ZNF366Q8N895 744 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 SUMF1Q8NBK3 374 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 HMGB4Q8WW32 186 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 CASKIN2Q8WXE0 1202 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 ATRIPQ8WXE1 791 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 RUBCNQ92622 972 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 FAM131CQ96AQ9 280 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 VOPP1Q96AW1 172 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 ISG20Q96AZ6 181 aaKnown RBP11.91□□□□□ -0.5
CLIP2-207ENST00000487447 ZC3H10Q96K80 434 aaKnown RBP11.91□□□□□ -0.5
CLIP2-207ENST00000487447 FAM129BQ96TA1 746 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 DESI2Q9BSY9 194 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 TPSD1Q9BZJ3 242 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 MTG2Q9H4K7 406 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 PRDM16Q9HAZ2 1276 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 ITM2CQ9NQX7 267 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 ALG6Q9Y672 507 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 DUSP10Q9Y6W6 482 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 WDR87Q6ZQQ6 2873 aa11.9□□□□□ -0.5
CLIP2-207ENST00000487447 CEP192Q8TEP8 1941 aa11.9□□□□□ -0.5
CLIP2-207ENST00000487447 MED19A0JLT2 244 aaPredicted RBP11.9□□□□□ -0.5
CLIP2-207ENST00000487447 TMEM110-MUSTN1A8MSY1 372 aa11.9□□□□□ -0.5
CLIP2-207ENST00000487447 C10orf142B7Z368 130 aa11.9□□□□□ -0.5
CLIP2-207ENST00000487447 CBX4O00257 560 aa11.9□□□□□ -0.5
CLIP2-207ENST00000487447 SMAD6O43541 496 aaKnown RBP11.9□□□□□ -0.5
CLIP2-207ENST00000487447 PSTPIP1O43586 416 aa11.9□□□□□ -0.5
CLIP2-207ENST00000487447 ZNF217O75362 1048 aa11.9□□□□□ -0.5
CLIP2-207ENST00000487447 RPP40O75818 363 aaKnown RBP11.9□□□□□ -0.5
CLIP2-207ENST00000487447 KDELR1P24390 212 aa11.9□□□□□ -0.5
CLIP2-207ENST00000487447 NOP2P46087 812 aaKnown RBP11.9□□□□□ -0.5
CLIP2-207ENST00000487447 PAFAH1B3Q15102 231 aaKnown RBP11.9□□□□□ -0.5
CLIP2-207ENST00000487447 DLG2Q15700 870 aa11.9□□□□□ -0.5
CLIP2-207ENST00000487447 INO80DQ53TQ3 878 aaPredicted RBP11.9□□□□□ -0.5
CLIP2-207ENST00000487447 HEATR6Q6AI08 1181 aaKnown RBP11.9□□□□□ -0.5
CLIP2-207ENST00000487447 IL31Q6EBC2 164 aa11.9□□□□□ -0.5
CLIP2-207ENST00000487447 C22orf39Q6P5X5 142 aa11.9□□□□□ -0.5
CLIP2-207ENST00000487447 TMPRSS6Q8IU80 811 aa11.9□□□□□ -0.5
CLIP2-207ENST00000487447 PCDH20Q8N6Y1 951 aaKnown RBP11.9□□□□□ -0.5
CLIP2-207ENST00000487447 LRRC57Q8N9N7 239 aa11.9□□□□□ -0.5
CLIP2-207ENST00000487447 PCDH19Q8TAB3 1148 aa11.9□□□□□ -0.5
CLIP2-207ENST00000487447 HMCESQ96FZ2 354 aa11.9□□□□□ -0.5
CLIP2-207ENST00000487447 SPON2Q9BUD6 331 aa11.9□□□□□ -0.5
CLIP2-207ENST00000487447 SLC39A8Q9C0K1 460 aa11.9□□□□□ -0.5
CLIP2-207ENST00000487447 SLC6A17Q9H1V8 727 aa11.9□□□□□ -0.5
CLIP2-207ENST00000487447 ETNK2Q9NVF9 386 aa11.9□□□□□ -0.5
CLIP2-207ENST00000487447 DDX56Q9NY93 547 aaKnown RBP11.9□□□□□ -0.5
CLIP2-207ENST00000487447 SCML1Q9UN30 329 aa11.9□□□□□ -0.5
CLIP2-207ENST00000487447 ZNF292O60281 2723 aa11.9□□□□□ -0.5
CLIP2-207ENST00000487447 GPR179Q6PRD1 2367 aa11.9□□□□□ -0.51
CLIP2-207ENST00000487447 IGHV1OR15-9A0A0B4J2B8 117 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 A0A0U1RQJ8 604 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 K7ERQ8 282 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 MCF2LO15068 1137 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 DAPK3O43293 454 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 PRAMEF11O60813 436 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 VAV1P15498 845 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 AMPD1P23109 780 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 SERPINB6P35237 376 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 NUMBP49757 651 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 KIF5AQ12840 1032 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 MMRN1Q13201 1228 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 SRSF5Q13243 272 aaKnown RBP11.89□□□□□ -0.51
CLIP2-207ENST00000487447 BYSLQ13895 437 aaKnown RBP11.89□□□□□ -0.51
CLIP2-207ENST00000487447 KRT81Q14533 505 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 USP39Q53GS9 565 aaKnown RBP11.89□□□□□ -0.51
CLIP2-207ENST00000487447 ANKRD20A8PQ5CZ79 823 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 SPDYCQ5MJ68 293 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 ZNF776Q68DI1 518 aaPredicted RBP11.89□□□□□ -0.51
CLIP2-207ENST00000487447 NCBP2-AS2Q69YL0 99 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 TMCO3Q6UWJ1 677 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 LINGO4Q6UY18 593 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 DGLUCYQ7Z3D6 616 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 MAP7D3Q8IWC1 876 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 KATNAL2Q8IYT4 538 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 PQLC3Q8N755 202 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 ATP11CQ8NB49 1132 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 OR2A12Q8NGT7 310 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 RAPGEF5Q92565 580 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 PRCCQ92733 491 aaPredicted RBP11.89□□□□□ -0.51
CLIP2-207ENST00000487447 FATE1Q969F0 183 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 SIPA1Q96FS4 1042 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 DUSP15Q9H1R2 295 aaPredicted RBP11.89□□□□□ -0.51
CLIP2-207ENST00000487447 GOLPH3Q9H4A6 298 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 BCCIPQ9P287 314 aaKnown RBP eCLIP11.89□□□□□ -0.51
CLIP2-207ENST00000487447 HPCAL4Q9UM19 191 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 MFHAS1Q9Y4C4 1052 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 NUP205Q92621 2012 aa11.89□□□□□ -0.51
CLIP2-207ENST00000487447 GRID2IPA4D2P6 1211 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 ARHGAP42A6NI28 874 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 ZBTB24O43167 697 aaPredicted RBP11.88□□□□□ -0.51
CLIP2-207ENST00000487447 BUB1O43683 1085 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 SPOPO43791 374 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 PEX11BO96011 259 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 GSRP00390 522 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 CTNNA1P35221 906 aaKnown RBP11.88□□□□□ -0.51
CLIP2-207ENST00000487447 SSR1P43307 286 aaKnown RBP11.88□□□□□ -0.51
CLIP2-207ENST00000487447 PAPOLAP51003 745 aaKnown RBP11.88□□□□□ -0.51
CLIP2-207ENST00000487447 TPMTP51580 245 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 IL10RBQ08334 325 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 GALNT2Q10471 571 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms