RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 SOX5P35711 763 aa12.74□□□□□ -0.37
SREBF1-215ENST00000487401 NXPH1P58417 271 aa12.74□□□□□ -0.37
SREBF1-215ENST00000487401 SLC20A2Q08357 652 aa12.74□□□□□ -0.37
SREBF1-215ENST00000487401 SETMARQ53H47 684 aaPredicted RBP12.74□□□□□ -0.37
SREBF1-215ENST00000487401 AGBL4Q5VU57 503 aa12.74□□□□□ -0.37
SREBF1-215ENST00000487401 LINGO4Q6UY18 593 aa12.74□□□□□ -0.37
SREBF1-215ENST00000487401 ZNF783Q6ZMS7 281 aa12.74□□□□□ -0.37
SREBF1-215ENST00000487401 TRIM72Q6ZMU5 477 aa12.74□□□□□ -0.37
SREBF1-215ENST00000487401 TMPRSS7Q7RTY8 843 aa12.74□□□□□ -0.37
SREBF1-215ENST00000487401 TRIM69Q86WT6 500 aa12.74□□□□□ -0.37
SREBF1-215ENST00000487401 GATAD2AQ86YP4 633 aa12.74□□□□□ -0.37
SREBF1-215ENST00000487401 GALNT15Q8N3T1 639 aa12.74□□□□□ -0.37
SREBF1-215ENST00000487401 EMC1Q8N766 993 aa12.74□□□□□ -0.37
SREBF1-215ENST00000487401 TMIEQ8NEW7 156 aa12.74□□□□□ -0.37
SREBF1-215ENST00000487401 OR7D4Q8NG98 312 aa12.74□□□□□ -0.37
SREBF1-215ENST00000487401 FAM131CQ96AQ9 280 aa12.74□□□□□ -0.37
SREBF1-215ENST00000487401 CCDC86Q9H6F5 360 aaKnown RBP12.74□□□□□ -0.37
SREBF1-215ENST00000487401 NLRC4Q9NPP4 1024 aa12.74□□□□□ -0.37
SREBF1-215ENST00000487401 ANO10Q9NW15 660 aa12.74□□□□□ -0.37
SREBF1-215ENST00000487401 TOR4AQ9NXH8 423 aa12.74□□□□□ -0.37
SREBF1-215ENST00000487401 NOCTQ9UK39 431 aaKnown RBP12.74□□□□□ -0.37
SREBF1-215ENST00000487401 NUP205Q92621 2012 aa12.74□□□□□ -0.37
SREBF1-215ENST00000487401 USP24Q9UPU5 2620 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 PRAMEF26H0Y7S4 382 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 GOLGA6L22H0YM25 854 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 SMAD6O43541 496 aaKnown RBP12.73□□□□□ -0.37
SREBF1-215ENST00000487401 RNGTTO60942 597 aaKnown RBP12.73□□□□□ -0.37
SREBF1-215ENST00000487401 ENDOD1O94919 500 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 LDOC1O95751 146 aaPredicted RBP12.73□□□□□ -0.37
SREBF1-215ENST00000487401 CYP1A1P04798 512 aaPredicted RBP12.73□□□□□ -0.37
SREBF1-215ENST00000487401 CHRNB2P17787 502 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 MMP8P22894 467 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 SDC4P31431 198 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 DNA2P51530 1060 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 COPB1P53618 953 aaKnown RBP12.73□□□□□ -0.37
SREBF1-215ENST00000487401 FMO1Q01740 532 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 OVGP1Q12889 678 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 SYCP1Q15431 976 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 CDO1Q16878 200 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 ARSIQ5FYB1 569 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 TRNP1Q6NT89 227 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 RWDD4Q6NW29 188 aaKnown RBP12.73□□□□□ -0.37
SREBF1-215ENST00000487401 BNIPLQ7Z465 357 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 IQCHQ86VS3 1027 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 DRC7Q8IY82 874 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 CHST14Q8NCH0 376 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 NEK11Q8NG66 645 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 OR2A12Q8NGT7 310 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 SLC30A5Q8TAD4 765 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 GPT2Q8TD30 523 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 SAP25Q8TEE9 199 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 RXFP2Q8WXD0 754 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 PPP1R16AQ96I34 528 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 C11orf70Q9BRQ4 267 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 TNKS2Q9H2K2 1166 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 ERVMER34-1Q9H9K5 563 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 ATP13A1Q9HD20 1204 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 ARHGAP20Q9P2F6 1191 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 PPARGC1AQ9UBK2 798 aaKnown RBP12.73□□□□□ -0.37
SREBF1-215ENST00000487401 IL36AQ9UHA7 158 aa12.73□□□□□ -0.37
SREBF1-215ENST00000487401 ASPMQ8IZT6 3477 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 MAP1BP46821 2468 aaKnown RBP12.72□□□□□ -0.37
SREBF1-215ENST00000487401 TNRC6BQ9UPQ9 1833 aaKnown RBP12.72□□□□□ -0.37
SREBF1-215ENST00000487401 A0A1W2PQU0 124 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 ENC1O14682 589 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 SLC31A1O15431 190 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 DKK1O94907 266 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 PCDH8O95206 1070 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 CTSLP07711 333 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 KRT3P12035 628 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 GLDCP23378 1020 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 ADRA1BP35368 520 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 NSFP46459 744 aaKnown RBP12.72□□□□□ -0.37
SREBF1-215ENST00000487401 RXRGP48443 463 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 JAM2P57087 298 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 GNA12Q03113 381 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 UBXN1Q04323 297 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 SHBQ15464 509 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 C15orf59Q2T9L4 293 aaPredicted RBP12.72□□□□□ -0.37
SREBF1-215ENST00000487401 CCDC14Q49A88 953 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 PIP5KL1Q5T9C9 394 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 NEK5Q6P3R8 708 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 C22orf39Q6P5X5 142 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 ERN2Q76MJ5 926 aaKnown RBP12.72□□□□□ -0.37
SREBF1-215ENST00000487401 EID2Q8N6I1 236 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 GRIN3AQ8TCU5 1115 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 ARRDC3Q96B67 414 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 KLHDC7BQ96G42 594 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 CNDP2Q96KP4 475 aaKnown RBP12.72□□□□□ -0.37
SREBF1-215ENST00000487401 CEP44Q9C0F1 390 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 SEPT11Q9NVA2 429 aaKnown RBP12.72□□□□□ -0.37
SREBF1-215ENST00000487401 ADAM22Q9P0K1 906 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 OR12D3Q9UGF7 316 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 SIK3Q9Y2K2 1263 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 CACNA1EQ15878 2313 aa12.72□□□□□ -0.37
SREBF1-215ENST00000487401 ASCC3Q8N3C0 2202 aaKnown RBP12.72□□□□□ -0.37
SREBF1-215ENST00000487401 C2CD4BA6NLJ0 364 aa12.71□□□□□ -0.37
SREBF1-215ENST00000487401 LGALS16A8MUM7 142 aa12.71□□□□□ -0.37
SREBF1-215ENST00000487401 EPHB6O15197 1021 aa12.71□□□□□ -0.37
SREBF1-215ENST00000487401 LEFTY1O75610 366 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms