RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 PDCL3Q9H2J4 239 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 SLC32A1Q9H598 525 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 EPHX3Q9H6B9 360 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 ERVK-5Q9HDB9 667 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 SWAP70Q9UH65 585 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 OSGIN2Q9Y236 505 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 TNFSF13BQ9Y275 285 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 DMRT1Q9Y5R6 373 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 UACAQ9BZF9 1416 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 WDR7Q9Y4E6 1490 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 KIAA0556O60303 1618 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 SLC22A23A1A5C7 686 aa5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 CXorf65A6NEN9 183 aa5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 LRRC3CA6NJW4 275 aa5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 F5H0A9 414 aaPredicted RBP5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 INPPL1O15357 1258 aa5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 STRNO43815 780 aa5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 IGLV2-14P01704 120 aa5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 HLA-DQA2P01906 255 aa5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 CHRM4P08173 479 aa5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 UBL4AP11441 157 aa5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 FCGR2AP12318 317 aa5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 RPS6KB1P23443 525 aa5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 EPHA8P29322 1005 aaPredicted RBP5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 TUBA4AP68366 448 aa5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 SLC45A4Q5BKX6 768 aa5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 AADACL2Q6P093 401 aa5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 ATF7IPQ6VMQ6 1270 aa5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 DIS3L2Q8IYB7 885 aaKnown RBP5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 SCAIQ8N9R8 606 aa5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 ADAMTS15Q8TE58 950 aa5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 BARD1Q99728 777 aaKnown RBP5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 FRMD8Q9BZ67 464 aaPredicted RBP5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 PLEKHA5Q9HAU0 1116 aa5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 TBC1D22BQ9NU19 505 aa5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 HCN3Q9P1Z3 774 aa5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 DISP3Q9P2K9 1392 aa5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 MAGI3Q5TCQ9 1506 aa5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 DISP1Q96F81 1524 aa5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 CTTNBP2Q8WZ74 1663 aa5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 COL11A2P13942 1736 aaPredicted RBP5.36□□□□□ -1.55
PRPF38A-203ENST00000487160 OR6C68A6NDL8 312 aa5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 PGPEP1LA6NFU8 196 aa5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 HBP1O60381 514 aa5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 RNASEH2AO75792 299 aaKnown RBP5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 RNF8O76064 485 aa5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 CBX6O95503 412 aa5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 NFATC1O95644 943 aa5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 FSHBP01225 129 aa5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 GDF5P43026 501 aa5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 POLD2P49005 469 aa5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 HARS2P49590 506 aaKnown RBP5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 UFM1P61960 85 aa5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 COL10A1Q03692 680 aa5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 FAM171A1Q5VUB5 890 aa5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 CFAP161Q6P656 301 aa5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 INO80CQ6PI98 192 aaPredicted RBP5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 ZNF813Q6ZN06 617 aa5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 TMTC3Q6ZXV5 915 aa5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 PLD5Q8N7P1 536 aa5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 OSR1Q8TAX0 266 aaPredicted RBP5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 HSPH1Q92598 858 aa5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 MAP4K1Q92918 833 aa5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 C5orf34Q96MH7 638 aa5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 SCAND2PQ9GZW5 306 aaPredicted RBP5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 TAS2R10Q9NYW0 307 aa5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 KCND2Q9NZV8 630 aa5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 NLKQ9UBE8 527 aa5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 FBXO2Q9UK22 296 aaPredicted RBP5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 SARDHQ9UL12 918 aa5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 DHDHQ9UQ10 334 aa5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 SCINQ9Y6U3 715 aa5.35□□□□□ -1.55
PRPF38A-203ENST00000487160 KDM3AQ9Y4C1 1321 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 TARSL2A2RTX5 802 aaKnown RBP5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 LDHCP07864 332 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 EFNB1P98172 346 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 FOXD4Q12950 439 aaPredicted RBP5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 ERV3-1Q14264 604 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 GALNT3Q14435 633 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 PGM5Q15124 567 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 TBCEQ15813 527 aaPredicted RBP5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 C5orf22Q49AR2 442 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 SLC9B1Q4ZJI4 515 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 ZNF667Q5HYK9 610 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 KIAA1755Q5JYT7 1200 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 NEK10Q6ZWH5 1172 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 CPLX4Q7Z7G2 160 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 NEK8Q86SG6 692 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 GHDCQ8N2G8 530 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 BOLLQ8N9W6 283 aaKnown RBP5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 C8orf58Q8NAV2 365 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 FAM98AQ8NCA5 519 aaKnown RBP5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 METTL6Q8TCB7 284 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 KAT2AQ92830 837 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 AGAP2Q99490 1192 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 PCED1AQ9H1Q7 454 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 IKZF4Q9H2S9 585 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 MOV10Q9HCE1 1003 aaKnown RBP5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 PCDHB16Q9NRJ7 776 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms