RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 DPYSQ14117 519 aa12.42□□□□□ -0.42
COL3A1-206ENST00000487010 ADRM1Q16186 407 aa12.42□□□□□ -0.42
COL3A1-206ENST00000487010 ANO4Q32M45 955 aa12.42□□□□□ -0.42
COL3A1-206ENST00000487010 APOBEC3FQ8IUX4 373 aaKnown RBP12.42□□□□□ -0.42
COL3A1-206ENST00000487010 FBXO16Q8IX29 292 aaPredicted RBP12.42□□□□□ -0.42
COL3A1-206ENST00000487010 CNTD1Q8N815 330 aa12.42□□□□□ -0.42
COL3A1-206ENST00000487010 DNAAF3Q8N9W5 541 aa12.42□□□□□ -0.42
COL3A1-206ENST00000487010 HSFY1Q96LI6 401 aa12.42□□□□□ -0.42
COL3A1-206ENST00000487010 ZMAT2Q96NC0 199 aaKnown RBP12.42□□□□□ -0.42
COL3A1-206ENST00000487010 IARS2Q9NSE4 1012 aaKnown RBP12.42□□□□□ -0.42
COL3A1-206ENST00000487010 C20orf96Q9NUD7 363 aaPredicted RBP12.42□□□□□ -0.42
COL3A1-206ENST00000487010 DDX18Q9NVP1 670 aaKnown RBP12.42□□□□□ -0.42
COL3A1-206ENST00000487010 GALNT8Q9NY28 637 aa12.42□□□□□ -0.42
COL3A1-206ENST00000487010 PPP1R1BQ9UD71 204 aaPredicted RBP12.42□□□□□ -0.42
COL3A1-206ENST00000487010 SLC39A10Q9ULF5 831 aa12.42□□□□□ -0.42
COL3A1-206ENST00000487010 MAGEB16A2A368 324 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 DCLK1O15075 740 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 RNASEH2AO75792 299 aaKnown RBP12.41□□□□□ -0.42
COL3A1-206ENST00000487010 PDGFRBP09619 1106 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 FAM200BP0CF97 657 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 TXNP10599 105 aaKnown RBP12.41□□□□□ -0.42
COL3A1-206ENST00000487010 ATXN3P54252 364 aaPredicted RBP12.41□□□□□ -0.42
COL3A1-206ENST00000487010 NAGLUP54802 743 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 PPP2R5DQ14738 602 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 GRM3Q14832 879 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 CERCAMQ5T4B2 595 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 OTUD1Q5VV17 481 aaPredicted RBP12.41□□□□□ -0.42
COL3A1-206ENST00000487010 KCTD11Q693B1 232 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 NXNQ6DKJ4 435 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 LSMEM2Q8N112 164 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 CRYBG2Q8N1P7 616 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 IRGQQ8WZA9 623 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 NDRG1Q92597 394 aaKnown RBP12.41□□□□□ -0.42
COL3A1-206ENST00000487010 MRPL1Q9BYD6 325 aaKnown RBP12.41□□□□□ -0.42
COL3A1-206ENST00000487010 TIMMDC1Q9NPL8 285 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 TLK1Q9UKI8 766 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 DERAQ9Y315 318 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 TCAF2A6NFQ2 919 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 NFKBIEO00221 500 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 EEF2KO00418 725 aaKnown RBP12.41□□□□□ -0.42
COL3A1-206ENST00000487010 DDHD2O94830 711 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 ZNF26P17031 533 aaPredicted RBP12.41□□□□□ -0.42
COL3A1-206ENST00000487010 CYP2B6P20813 491 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 NPY2RP49146 381 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 PITX1P78337 314 aaPredicted RBP12.41□□□□□ -0.42
COL3A1-206ENST00000487010 DCAF6Q58WW2 860 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 KLC3Q6P597 504 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 PAOXQ6QHF9 649 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 LRRC52Q8N7C0 313 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 NLRP7Q8WX94 980 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 FAM149B1Q96BN6 582 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 MARK4Q96L34 752 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 CAMKK2Q96RR4 588 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 GPR22Q99680 433 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 NPAS2Q99743 824 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 PLEKHA5Q9HAU0 1116 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 CHRAC1Q9NRG0 131 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 SETD4Q9NVD3 440 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 THEGQ9P2T0 379 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 TUBGCP4Q9UGJ1 667 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 CIDEBQ9UHD4 219 aa12.41□□□□□ -0.42
COL3A1-206ENST00000487010 COPG1Q9Y678 874 aaKnown RBP12.41□□□□□ -0.42
COL3A1-206ENST00000487010 SYNJ2BP-COX16A0A087WUM0 186 aa12.4□□□□□ -0.42
COL3A1-206ENST00000487010 TRIM38O00635 465 aa12.4□□□□□ -0.42
COL3A1-206ENST00000487010 ZBTB24O43167 697 aaPredicted RBP12.4□□□□□ -0.42
COL3A1-206ENST00000487010 DAB1O75553 588 aa12.4□□□□□ -0.42
COL3A1-206ENST00000487010 ZNF189O75820 626 aaPredicted RBP12.4□□□□□ -0.42
COL3A1-206ENST00000487010 VAPBO95292 243 aa12.4□□□□□ -0.42
COL3A1-206ENST00000487010 JUNP05412 331 aaKnown RBP12.4□□□□□ -0.42
COL3A1-206ENST00000487010 CDK4P11802 303 aa12.4□□□□□ -0.42
COL3A1-206ENST00000487010 LMO2P25791 158 aa12.4□□□□□ -0.42
COL3A1-206ENST00000487010 MYBPC3Q14896 1274 aa12.4□□□□□ -0.42
COL3A1-206ENST00000487010 ZBTB6Q15916 424 aa12.4□□□□□ -0.42
COL3A1-206ENST00000487010 KIZQ2M2Z5 673 aa12.4□□□□□ -0.42
COL3A1-206ENST00000487010 MGAT5BQ3V5L5 792 aa12.4□□□□□ -0.42
COL3A1-206ENST00000487010 DALRD3Q5D0E6 543 aaKnown RBP12.4□□□□□ -0.42
COL3A1-206ENST00000487010 BNIPLQ7Z465 357 aa12.4□□□□□ -0.42
COL3A1-206ENST00000487010 AMIGO2Q86SJ2 522 aa12.4□□□□□ -0.42
COL3A1-206ENST00000487010 STYXQ8WUJ0 223 aa12.4□□□□□ -0.42
COL3A1-206ENST00000487010 NT5C3BQ969T7 300 aa12.4□□□□□ -0.42
COL3A1-206ENST00000487010 TMA16Q96EY4 203 aaKnown RBP12.4□□□□□ -0.42
COL3A1-206ENST00000487010 SCYL1Q96KG9 808 aa12.4□□□□□ -0.42
COL3A1-206ENST00000487010 TSNARE1Q96NA8 513 aa12.4□□□□□ -0.42
COL3A1-206ENST00000487010 COX16Q9P0S2 106 aa12.4□□□□□ -0.42
COL3A1-206ENST00000487010 MAGED2Q9UNF1 606 aaPredicted RBP12.4□□□□□ -0.42
COL3A1-206ENST00000487010 RUVBL2Q9Y230 463 aaKnown RBP12.4□□□□□ -0.42
COL3A1-206ENST00000487010 CEPT1Q9Y6K0 416 aa12.4□□□□□ -0.42
COL3A1-206ENST00000487010 MCM3APO60318 1980 aa12.4□□□□□ -0.43
COL3A1-206ENST00000487010 ERI2A8K979 691 aaKnown RBP12.39□□□□□ -0.43
COL3A1-206ENST00000487010 TARM1B6A8C7 271 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 H0YJX3 145 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 H3BSA7 217 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 TRPA1O75762 1119 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 CYP2C9P11712 490 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 PSMC3P17980 439 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 TCN1P20061 433 aaPredicted RBP12.39□□□□□ -0.43
COL3A1-206ENST00000487010 PCSK6P29122 969 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 SLC5A2P31639 672 aa12.39□□□□□ -0.43
COL3A1-206ENST00000487010 CD68P34810 354 aaPredicted RBP12.39□□□□□ -0.43
COL3A1-206ENST00000487010 GNL1P36915 607 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms