RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 NEDD8Q15843 81 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 CA9Q16790 459 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 FAM102AQ5T9C2 384 aaPredicted RBP10.82□□□□□ -0.68
CCDC171-208ENST00000486641 SLFN12LQ6IEE8 588 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 C4orf22Q6V702 233 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 CHST15Q7LFX5 561 aaPredicted RBP10.82□□□□□ -0.68
CCDC171-208ENST00000486641 CADM3Q8N126 398 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 MCPH1Q8NEM0 835 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 CANT1Q8WVQ1 401 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 RXFP2Q8WXD0 754 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 CLEC4DQ8WXI8 215 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 TOP1MTQ969P6 601 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 PGLYRP2Q96PD5 576 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 TCF12Q99081 682 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 CGREF1Q99674 301 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 HGH1Q9BTY7 390 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 ADI1Q9BV57 179 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 DRC3Q9H069 523 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 NANOGQ9H9S0 305 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 NMRAL1Q9HBL8 299 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 UTP6Q9NYH9 597 aaKnown RBP10.82□□□□□ -0.68
CCDC171-208ENST00000486641 GPRC5DQ9NZD1 345 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 VPS51Q9UID3 782 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 DAPK2Q9UIK4 370 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 CPQQ9Y646 472 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 A0A096LPK6 155 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 IQCA1LA6NCM1 817 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 K7ERI5 159 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 KPNA4O00629 521 aaPredicted RBP10.81□□□□□ -0.68
CCDC171-208ENST00000486641 NDUFB5O43674 189 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 KDM1AO60341 852 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 CCNA2P20248 432 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 GPD1P21695 349 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 MAP4P27816 1152 aaKnown RBP10.81□□□□□ -0.68
CCDC171-208ENST00000486641 GP5P40197 560 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 GARSP41250 739 aaKnown RBP10.81□□□□□ -0.68
CCDC171-208ENST00000486641 ASPAP45381 313 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 GRIA4P48058 902 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 KRT76Q01546 638 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 OXA1LQ15070 435 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 CLPPQ16740 277 aaPredicted RBP10.81□□□□□ -0.68
CCDC171-208ENST00000486641 PHKG1Q16816 387 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 SLC36A3Q495N2 470 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 GRTP1Q5TC63 336 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 BSPRYQ5W0U4 402 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 HACE1Q8IYU2 909 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 MFSD2AQ8NA29 543 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 SREK1Q8WXA9 508 aaKnown RBP10.81□□□□□ -0.68
CCDC171-208ENST00000486641 HPS1Q92902 700 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 TMEM143Q96AN5 459 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 FBXL20Q96IG2 436 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 WNK4Q96J92 1243 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 ALPK1Q96QP1 1244 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 OLFM1Q99784 485 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 EFHD1Q9BUP0 239 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 C1orf50Q9BV19 199 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 UNC93B1Q9H1C4 597 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 SEPT9Q9UHD8 586 aaPredicted RBP10.81□□□□□ -0.68
CCDC171-208ENST00000486641 PCDHA10Q9Y5I2 948 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 HEATR9A2RTY3 570 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 H0YCG3 227 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 GRAP2O75791 330 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 BCL10O95999 233 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 PDGFRAP16234 1089 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 PGAM1P18669 254 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 HDCP19113 662 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 POLR2IP36954 125 aaKnown RBP10.81□□□□□ -0.68
CCDC171-208ENST00000486641 ABCG1P45844 678 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 GBE1Q04446 702 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 GRSF1Q12849 480 aaKnown RBP eCLIP10.81□□□□□ -0.68
CCDC171-208ENST00000486641 NAB1Q13506 487 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 LRP8Q14114 963 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 KIZQ2M2Z5 673 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 GLRA4Q5JXX5 417 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 C6orf10Q5SRN2 563 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 FSTL4Q6MZW2 842 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 SWSAP1Q6NVH7 229 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 BTLAQ7Z6A9 289 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 CLEC14AQ86T13 490 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 CDKL3Q8IVW4 592 aaPredicted RBP10.81□□□□□ -0.68
CCDC171-208ENST00000486641 PBXIP1Q96AQ6 731 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 CCDC138Q96M89 665 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 CNPY3Q9BT09 278 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 GMPR2Q9P2T1 348 aaKnown RBP10.81□□□□□ -0.68
CCDC171-208ENST00000486641 CD300AQ9UGN4 299 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 TCAF1Q9Y4C2 921 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 WDR81Q562E7 1941 aa10.81□□□□□ -0.68
CCDC171-208ENST00000486641 FAM149AA5PLN7 773 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 C2CD4BA6NLJ0 364 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 PFDN6O15212 129 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 MED7O43513 233 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 H2AFYO75367 372 aaKnown RBP10.8□□□□□ -0.68
CCDC171-208ENST00000486641 KCNH1O95259 989 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 PAX3P23760 479 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 GNL1P36915 607 aaPredicted RBP10.8□□□□□ -0.68
CCDC171-208ENST00000486641 YAP1P46937 504 aaKnown RBP10.8□□□□□ -0.68
CCDC171-208ENST00000486641 GSSP48637 474 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 CDH8P55286 799 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 PGM5Q15124 567 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 TRAPPC3LQ5T215 181 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms