RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 ITPRIPL1Q6GPH6 555 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 C8orf74Q6P047 294 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 AADACL2Q6P093 401 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 RHBDF2Q6PJF5 856 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 CCDC137Q6PK04 289 aaKnown RBP7.11□□□□□ -1.27
UBR4-214ENST00000486515 C4orf22Q6V702 233 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 ARHGEF18Q6ZSZ5 1173 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 ANKS1BQ7Z6G8 1248 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 CIR1Q86X95 450 aaPredicted RBP7.11□□□□□ -1.27
UBR4-214ENST00000486515 CCDC13Q8IYE1 715 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 SLC44A3Q8N4M1 653 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 SPATA4Q8NEY3 305 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 ST13P5Q8NFI4 369 aaPredicted RBP7.11□□□□□ -1.27
UBR4-214ENST00000486515 ATL2Q8NHH9 583 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 FIBINQ8TAL6 211 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 TTC8Q8TAM2 541 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 ACTL9Q8TC94 416 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 C1orf54Q8WWF1 131 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 CASKIN2Q8WXE0 1202 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 TSC1Q92574 1164 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 DNASE1L2Q92874 299 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 ACDQ96AP0 544 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 CELF6Q96J87 481 aaKnown RBP7.11□□□□□ -1.27
UBR4-214ENST00000486515 ZFYVE19Q96K21 471 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 PRICKLE1Q96MT3 831 aaPredicted RBP7.11□□□□□ -1.27
UBR4-214ENST00000486515 PNKPQ96T60 521 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 VAT1Q99536 393 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 FAM83CQ9BQN1 747 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 RAB17Q9H0T7 212 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 ABCB8Q9NUT2 735 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 DTLQ9NZJ0 730 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 MARK1Q9P0L2 795 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 UBA2Q9UBT2 640 aaPredicted RBP7.11□□□□□ -1.27
UBR4-214ENST00000486515 IPO11Q9UI26 975 aaKnown RBP7.11□□□□□ -1.27
UBR4-214ENST00000486515 GGA2Q9UJY4 613 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 TBC1D30Q9Y2I9 924 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 MRPS17Q9Y2R5 130 aaKnown RBP7.11□□□□□ -1.27
UBR4-214ENST00000486515 UTP11Q9Y3A2 253 aaKnown RBP7.11□□□□□ -1.27
UBR4-214ENST00000486515 OBSL1O75147 1896 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 MYO18BQ8IUG5 2567 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 NBEAQ8NFP9 2946 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 PRR5-ARHGAP8B1AHC4 643 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 LOC730098B7Z3J9 87 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 NRG2O14511 850 aaPredicted RBP7.1□□□□□ -1.27
UBR4-214ENST00000486515 MATN3O15232 486 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 KCNN4O15554 427 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 LIASO43766 372 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 MFSD11O43934 449 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 CACNG3O60359 315 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 GREM1O60565 184 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 SLU7O95391 586 aaKnown RBP7.1□□□□□ -1.27
UBR4-214ENST00000486515 PENKP01210 267 aaPredicted RBP7.1□□□□□ -1.27
UBR4-214ENST00000486515 CYP17A1P05093 508 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 GLULP15104 373 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 CA4P22748 312 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 IL4RP24394 825 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 MCM3P25205 808 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 HOXD9P28356 352 aaPredicted RBP7.1□□□□□ -1.27
UBR4-214ENST00000486515 CSKP41240 450 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 GARSP41250 739 aaKnown RBP7.1□□□□□ -1.27
UBR4-214ENST00000486515 GRIA2P42262 883 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 SARNPP82979 210 aaKnown RBP7.1□□□□□ -1.27
UBR4-214ENST00000486515 ARHGAP8P85298 464 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 ECT2LQ008S8 904 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 GBE1Q04446 702 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 RAD51Q06609 339 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 TNK2Q07912 1038 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 SERINC3Q13530 473 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 DHX34Q14147 1143 aaKnown RBP7.1□□□□□ -1.27
UBR4-214ENST00000486515 RFTN1Q14699 578 aaPredicted RBP7.1□□□□□ -1.27
UBR4-214ENST00000486515 EIF4HQ15056 248 aaKnown RBP7.1□□□□□ -1.27
UBR4-214ENST00000486515 TAZQ16635 292 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 GLE1Q53GS7 698 aaKnown RBP7.1□□□□□ -1.27
UBR4-214ENST00000486515 SOWAHCQ53LP3 525 aaPredicted RBP7.1□□□□□ -1.27
UBR4-214ENST00000486515 SLC45A4Q5BKX6 768 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 FYB2Q5VWT5 728 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 ASTLQ6HA08 431 aaPredicted RBP7.1□□□□□ -1.27
UBR4-214ENST00000486515 DRICH1Q6PGQ1 229 aaPredicted RBP7.1□□□□□ -1.27
UBR4-214ENST00000486515 SYDE1Q6ZW31 735 aaPredicted RBP7.1□□□□□ -1.27
UBR4-214ENST00000486515 PID1Q7Z2X4 250 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 TRMT11Q7Z4G4 463 aaKnown RBP7.1□□□□□ -1.27
UBR4-214ENST00000486515 NLRP14Q86W24 1093 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 RALGPS2Q86X27 583 aaPredicted RBP7.1□□□□□ -1.27
UBR4-214ENST00000486515 RYBPQ8N488 228 aaPredicted RBP7.1□□□□□ -1.27
UBR4-214ENST00000486515 PQLC3Q8N755 202 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 DCAF4L2Q8NA75 395 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 ATP11CQ8NB49 1132 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 HTR3CQ8WXA8 447 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 ARHGEF2Q92974 986 aaKnown RBP7.1□□□□□ -1.27
UBR4-214ENST00000486515 WBP2Q969T9 261 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 HDAC11Q96DB2 347 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 HMCESQ96FZ2 354 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 ZNF599Q96NL3 588 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 KRT12Q99456 494 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 P2RY13Q9BPV8 354 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 CINPQ9BW66 212 aaPredicted RBP7.1□□□□□ -1.27
UBR4-214ENST00000486515 CARD6Q9BX69 1037 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 MAGEB5Q9BZ81 275 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 PLA2G2FQ9BZM2 168 aa7.1□□□□□ -1.27
UBR4-214ENST00000486515 SLC39A8Q9C0K1 460 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms