RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 NAB1Q13506 487 aa8.89□□□□□ -0.99
GABRE-209ENST00000486255 CAMK1Q14012 370 aa8.89□□□□□ -0.99
GABRE-209ENST00000486255 USF2Q15853 346 aaPredicted RBP8.89□□□□□ -0.99
GABRE-209ENST00000486255 SPDYCQ5MJ68 293 aa8.89□□□□□ -0.99
GABRE-209ENST00000486255 PRR5LQ6MZQ0 368 aa8.89□□□□□ -0.99
GABRE-209ENST00000486255 MSANTD1Q6ZTZ1 278 aa8.89□□□□□ -0.99
GABRE-209ENST00000486255 RNF44Q7L0R7 432 aa8.89□□□□□ -0.99
GABRE-209ENST00000486255 PAGE2Q7Z2X7 111 aa8.89□□□□□ -0.99
GABRE-209ENST00000486255 R3HCC1LQ7Z5L2 792 aaKnown RBP8.89□□□□□ -0.99
GABRE-209ENST00000486255 YTHDF3Q7Z739 585 aaKnown RBP8.89□□□□□ -0.99
GABRE-209ENST00000486255 SP8Q8IXZ3 490 aa8.89□□□□□ -0.99
GABRE-209ENST00000486255 CLYBLQ8N0X4 340 aa8.89□□□□□ -0.99
GABRE-209ENST00000486255 ASB2Q96Q27 587 aa8.89□□□□□ -0.99
GABRE-209ENST00000486255 BBS4Q96RK4 519 aa8.89□□□□□ -0.99
GABRE-209ENST00000486255 TSPAN18Q96SJ8 248 aa8.89□□□□□ -0.99
GABRE-209ENST00000486255 EMILIN2Q9BXX0 1053 aa8.89□□□□□ -0.99
GABRE-209ENST00000486255 MOV10Q9HCE1 1003 aaKnown RBP8.89□□□□□ -0.99
GABRE-209ENST00000486255 RPS6KA6Q9UK32 745 aa8.89□□□□□ -0.99
GABRE-209ENST00000486255 MTF2Q9Y483 593 aaPredicted RBP8.89□□□□□ -0.99
GABRE-209ENST00000486255 GSAPA4D1B5 854 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 ASB14A6NK59 587 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 TRIM3O75382 744 aaPredicted RBP8.88□□□□□ -0.99
GABRE-209ENST00000486255 RECQL5O94762 991 aaPredicted RBP8.88□□□□□ -0.99
GABRE-209ENST00000486255 PCSK1P29120 753 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 S100A3P33764 101 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 IDH2P48735 452 aaKnown RBP8.88□□□□□ -0.99
GABRE-209ENST00000486255 SLC11A2P49281 568 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 FAM187BQ17R55 369 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 HKDC1Q2TB90 917 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 ZCCHC23Q6ZST2 131 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 SLC20A1Q8WUM9 679 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 SLC47A1Q96FL8 570 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 NUDT12Q9BQG2 462 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 CHMP1AQ9HD42 196 aaPredicted RBP8.88□□□□□ -0.99
GABRE-209ENST00000486255 CACNA1FO60840 1977 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 AHDC1Q5TGY3 1603 aaPredicted RBP8.88□□□□□ -0.99
GABRE-209ENST00000486255 TRIM38O00635 465 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 TBX3O15119 743 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 ITGB3P05106 788 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 COX4I1P13073 169 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 RPL21P46778 160 aaKnown RBP8.88□□□□□ -0.99
GABRE-209ENST00000486255 OXCT1P55809 520 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 GPSM2P81274 684 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 SFRP1Q8N474 314 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 CARNMT1Q8N4J0 409 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 AADATQ8N5Z0 425 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 SMYD1Q8NB12 490 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 AENQ8WTP8 325 aaKnown RBP8.88□□□□□ -0.99
GABRE-209ENST00000486255 PCDH9Q9HC56 1237 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 DPP3Q9NY33 737 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 IRAK3Q9Y616 596 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 ROBO1Q9Y6N7 1651 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 FLT1P17948 1338 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 NADKO95544 446 aaPredicted RBP8.88□□□□□ -0.99
GABRE-209ENST00000486255 MYL4P12829 197 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 COX7A2P14406 83 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 GPR15P49685 360 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 CDK7P50613 346 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 GRPEL2Q8TAA5 225 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 CCSER2Q9H7U1 834 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.88□□□□□ -0.99
GABRE-209ENST00000486255 NPTXRO95502 500 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 FAM153BP0C7A2 387 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 ITGB6P18564 788 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 MUTP22033 750 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 S100A2P29034 98 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 CRATP43155 626 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 MAZP56270 477 aaKnown RBP8.88□□□□□ -0.99
GABRE-209ENST00000486255 SLC25A3Q00325 362 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 FAM153CQ494X1 144 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 SYT12Q8IV01 421 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 APOL2Q9BQE5 337 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 ADGRE3Q9BY15 652 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 MED28Q9H204 178 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 DDIT4Q9NX09 232 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 STOX2Q9P2F5 926 aaPredicted RBP8.88□□□□□ -0.99
GABRE-209ENST00000486255 SPEF1Q9Y4P9 236 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 NR2E3Q9Y5X4 410 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 IGSF9BQ9UPX0 1349 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 GSG1L2A8MUP6 293 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 F5H6K3 240 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 PRODHO43272 600 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 NUDT14O95848 222 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 SERPINA1P01009 418 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 HIST1H2ABP04908 130 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 RB1P06400 928 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 RPL14P50914 215 aaKnown RBP8.88□□□□□ -0.99
GABRE-209ENST00000486255 KPNA1P52294 538 aaPredicted RBP8.88□□□□□ -0.99
GABRE-209ENST00000486255 PTPN5P54829 565 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 KLRC3Q07444 240 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 SLC20A2Q08357 652 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 TTMPQ5BVD1 217 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 ZNF549Q6P9A3 640 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 DNAJC14Q6Y2X3 702 aaPredicted RBP8.88□□□□□ -0.99
GABRE-209ENST00000486255 HIST3H2AQ7L7L0 130 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 LDHDQ86WU2 507 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 ZSWIM2Q8NEG5 633 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 HIST1H2ACQ93077 130 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 ZNF285Q96NJ3 590 aa8.88□□□□□ -0.99
GABRE-209ENST00000486255 KATNAL1Q9BW62 490 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms