RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 ZKSCAN8Q15776 578 aaPredicted RBP12.18□□□□□ -0.46
PKP4-213ENST00000486254 GALNTL6Q49A17 601 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 FYB2Q5VWT5 728 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 ALG1LQ6GMV1 187 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 FBXL22Q6P050 247 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 RANBP10Q6VN20 620 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 RASSF3Q86WH2 238 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 SLC39A11Q8N1S5 342 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 NETO2Q8NC67 525 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 STKLD1Q8NE28 680 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 PEX13Q92968 403 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 ZNF669Q96BR6 464 aaPredicted RBP12.18□□□□□ -0.46
PKP4-213ENST00000486254 VWCEQ96DN2 955 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 ZNF419Q96HQ0 510 aaPredicted RBP12.18□□□□□ -0.46
PKP4-213ENST00000486254 B3GALT6Q96L58 329 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 ZNF558Q96NG5 402 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 RANBP9Q96S59 729 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 RBBP8Q99708 897 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 PAIP2Q9BPZ3 127 aaKnown RBP12.18□□□□□ -0.46
PKP4-213ENST00000486254 VN1R3Q9BXE9 311 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 ATP13A1Q9HD20 1204 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 SLC17A7Q9P2U7 560 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 HCSTQ9UBK5 93 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 DCDC2Q9UHG0 476 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 USH1CQ9Y6N9 552 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 KIAA1671Q9BY89 1806 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 SLC12A8A0AV02 714 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 GOLGA8RI6L899 631 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 C2CD2LO14523 706 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 UGT1A9O60656 530 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 RAMP2O60895 175 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 DCTN3O75935 186 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 DNAJC8O75937 253 aaPredicted RBP12.17□□□□□ -0.46
PKP4-213ENST00000486254 ALDOAP04075 364 aaKnown RBP12.17□□□□□ -0.46
PKP4-213ENST00000486254 CLTBP09497 229 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 PPM1AP35813 382 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 ATP5C1P36542 298 aaKnown RBP12.17□□□□□ -0.46
PKP4-213ENST00000486254 SERPINB8P50452 374 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 ARPP19P56211 112 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 CRADDP78560 199 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 RAB33AQ14088 237 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 UGP2Q16851 508 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 RNF187Q5TA31 235 aaPredicted RBP12.17□□□□□ -0.46
PKP4-213ENST00000486254 TMCO4Q5TGY1 634 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 ATG16L1Q676U5 607 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 DENND5AQ6IQ26 1287 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 PKN3Q6P5Z2 889 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 PRSS55Q6UWB4 352 aaPredicted RBP12.17□□□□□ -0.46
PKP4-213ENST00000486254 ARHGAP36Q6ZRI8 547 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 NSMCE1Q8WV22 266 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 ARMC5Q96C12 935 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 IMP4Q96G21 291 aaKnown RBP12.17□□□□□ -0.46
PKP4-213ENST00000486254 ZNF333Q96JL9 665 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 C7orf26Q96N11 449 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 FCRL3Q96P31 734 aaPredicted RBP12.17□□□□□ -0.46
PKP4-213ENST00000486254 FAM111AQ96PZ2 611 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 TRIM56Q9BRZ2 755 aaKnown RBP12.17□□□□□ -0.46
PKP4-213ENST00000486254 PPP1R12CQ9BZL4 782 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 UGT1A7Q9HAW7 530 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 UGT1A10Q9HAW8 530 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 UGT1A8Q9HAW9 530 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.17□□□□□ -0.46
PKP4-213ENST00000486254 NDFIP2Q9NV92 336 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 RBM22Q9NW64 420 aaKnown RBP eCLIP12.17□□□□□ -0.46
PKP4-213ENST00000486254 MPP6Q9NZW5 540 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 NUDT5Q9UKK9 219 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 SLC27A5Q9Y2P5 690 aa12.17□□□□□ -0.46
PKP4-213ENST00000486254 MIA3Q5JRA6 1907 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 ZNF840PA6NDX5 716 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 NT5C1B-RDH14C9J2C7 533 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 BAIAP3O94812 1187 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 PAPSS2O95340 614 aaPredicted RBP12.16□□□□□ -0.46
PKP4-213ENST00000486254 EPOP01588 193 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 ATP5BP06576 529 aaKnown RBP12.16□□□□□ -0.46
PKP4-213ENST00000486254 HMGA1P17096 107 aaKnown RBP12.16□□□□□ -0.46
PKP4-213ENST00000486254 OR1D2P34982 312 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 SLC11A2P49281 568 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 CSRP3P50461 194 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 SERINC3Q13530 473 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 HECTD3Q5T447 861 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 TEDDM1Q5T9Z0 273 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 MARC1Q5VT66 337 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 KIAA0930Q6ICG6 404 aaPredicted RBP12.16□□□□□ -0.46
PKP4-213ENST00000486254 KIAA1841Q6NSI8 718 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 KDELC1Q6UW63 502 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.16□□□□□ -0.46
PKP4-213ENST00000486254 CHST9Q7L1S5 443 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 OTOAQ7RTW8 1153 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 TAS1R1Q7RTX1 841 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 GALNT7Q86SF2 657 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 DDX53Q86TM3 631 aaKnown RBP12.16□□□□□ -0.46
PKP4-213ENST00000486254 KCNMB4Q86W47 210 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 NDUFAF2Q8N183 169 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 CCDC63Q8NA47 563 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 GABPB2Q8TAK5 448 aaPredicted RBP12.16□□□□□ -0.46
PKP4-213ENST00000486254 HMCESQ96FZ2 354 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 TMEM169Q96HH4 297 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 KLF6Q99612 283 aaPredicted RBP12.16□□□□□ -0.46
PKP4-213ENST00000486254 CLSTN3Q9BQT9 956 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 SIKE1Q9BRV8 207 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms